Tomohiro Umezu

Dr. Tomohiro Umezu

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 December 2014 in Blood
Verified
Journal Article
Open access
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TUTomohiro Umezu
Tomohiro Umezu
HTHiroko Tadokoro
Hiroko Tadokoro
KAKenko Azuma
Kenko Azuma
SYSeiichiro Yoshizawa
Seiichiro Yoshizawa
KOKazuma Ohyashiki
Kazuma Ohyashiki
JOJunko H. Ohyashiki
Junko H. Ohyashiki
Key Points: We established hypoxia-resistant cells that can mimic in vivo conditions of hypoxic bone marrow. Exosomal miR-135b derived from these cell lines enhanced endothelial tube formation under hypoxia via the HIF-FIH signaling pathway.

16 July 2012 in Oncogene
Verified
Journal Article
Closed access
TUTomohiro Umezu
Tomohiro Umezu
KOK Ohyashiki
K Ohyashiki
MKM Kuroda
M Kuroda
JOJ H Ohyashiki
J H Ohyashiki

1 November 2013 in Journal of Biological Chemistry
Verified
Journal Article
Open access
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HTHiroko Tadokoro
Hiroko Tadokoro
TUTomohiro Umezu
Tomohiro Umezu
KOKazuma Ohyashiki
Kazuma Ohyashiki
THToshihiko Hirano
Toshihiko Hirano
JOJunko H. Ohyashiki
Junko H. Ohyashiki
Heme oxygenase catalyzes the degradation of heme to biliverdin, iron, and carbon monoxide. Here, we present crystal structures of the substrate-free, Fe3+-biliverdin-bound, and biliverdin-bound forms of HmuO, a heme oxygenase from Corynebacterium diphtheriae, refined to 1.80, 1.90, and 1.85 Å resolution, respectively. In the substrate-free structure, the proximal and distal helices, which tightly bracket the substrate heme in the substrate-bound heme complex, move apart, and the proximal helix is partially unwound. These features are supported by the molecular dynamic simulations. The structure implies that the heme binding fixes the enzyme active site structure, including the water hydrogen bond network critical for heme degradation. The biliverdin groups assume the helical conformation and are located in the heme pocket in the crystal structures of the Fe3+-biliverdin-bound and the biliverdin-bound HmuO, prepared by in situ heme oxygenase reaction from the heme complex crystals. The proximal His serves as the Fe3+-biliverdin axial ligand in the former complex and forms a hydrogen bond through a bridging water molecule with the biliverdin pyrrole nitrogen atoms in the latter complex. In both structures, salt bridges between one of the biliverdin propionate groups and the Arg and Lys residues further stabilize biliverdin at the HmuO heme pocket. Additionally, the crystal structure of a mixture of two intermediates between the Fe3+-biliverdin and biliverdin complexes has been determined at 1.70 Å resolution, implying a possible route for iron exit.

1 June 2021 in Molecular Therapy - Methods & Clinical Development
Verified
Journal Article
Open access
TUTomohiro Umezu
Tomohiro Umezu
MTMasakatsu Takanashi
Masakatsu Takanashi
YMYoshiki Murakami
Yoshiki Murakami
SOShin-Ichiro Ohno
Shin-Ichiro Ohno
KKKohsuke Kanekura
Kohsuke Kanekura
MKMasahiko Kuroda
Masahiko Kuroda
Extracellular vesicles derived from mammalian cells could be useful carriers for drug delivery systems (DDSs); however, with regard to clinical application, there are several issues to be overcome. Acerola (Malpighia emarginata DC.) is a popular health food. In this study, the feasibility of orally administered nucleic acid drug delivery by acerola exosome-like nanoparticles (AELNs) was examined. AELNs were recovered from acerola juice using an affinity column instead of ultracentrifugation. MicroRNA (miRNA) was sufficiently encapsulated in AELNs by 30-min incubation on ice and was protected against RNase, strong acid, and base treatments. The administration of an AELN/miRNA mixture in cells achieved downregulation of the miRNA’s target gene, and this mixture showed cytoplasmic localization. AELNs orally delivered small RNA to the digestive system in vivo. The target gene-suppressing effect in the small intestine and liver peaked 1 day after administration, indicating potential for use as an oral DDS for nucleic acid in the digestive system.

16 May 2017 in Blood Advances
Verified
Journal Article
Open access
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TUTomohiro Umezu
Tomohiro Umezu
SISatoshi Imanishi
Satoshi Imanishi
KAKenko Azuma
Kenko Azuma
CKChiaki Kobayashi
Chiaki Kobayashi
SYSeiichiro Yoshizawa
Seiichiro Yoshizawa
JOJunko H. Ohyashiki
Junko H. Ohyashiki
Key Points: Exosomal miR-340 derived from young BMSCs inhibited tumor angiogenesis via the HGF/c-MET signaling pathway. The anti-angiogenic effect of exosomes from older BMSCs was restored by direct transfection of young BMSC-derived exosomal miRNAs.

24 February 2011 in PLOS ONE
Verified
Journal Article
Open access
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KOKazuma Ohyashiki
Kazuma Ohyashiki
TUTomohiro Umezu
Tomohiro Umezu
SYSei-Ichiro Yoshizawa
Sei-Ichiro Yoshizawa
YIYoshikazu Ito
Yoshikazu Ito
MOMichiyo Ohyashiki
Michiyo Ohyashiki
JOJunko H. Ohyashiki
Junko H. Ohyashiki
We undertook a study to evaluate the clinical relevance of miR-92a in plasma obtained from non-Hodgkin's lymphoma (NHL) patients, because the miR-17-92 polycistronic miRNA cluster plays a crucial role in lymphomagenesis and affects neo-angiogenesis. Plasma miR-92a values in NHL were extremely low (<5%), compared with healthy subjects (P<.0001), irrespective of lymphoma sub-type. The very low plasma level of miR-92a increased in the complete response (CR) phase but did not reach the normal range, and the plasma level was lower again in the relapse phase. Patients in CR or CR unconfirmed with a plasma miR-92a level of less than the cut-off level showed a significantly high relapse rate compared with patients with normalized plasma miR-92a level. The current results therefore indicate that the plasma miR-92a value could be a novel biomarker not only for diagnosis but also for monitoring lymphoma patients after chemotherapy.