The stalk, ear and root rot (SERR) of maize caused by Fusarium verticillioides (Fv) severely impacts crop production in tropical and subtropical regions. The aim of the present work was to screen bacterial isolates in order to find novel native biocontrol agents against Fv. A culturable bacterial collection consisting of 11,520 isolates enriched in Firmicutes and Proteobacteria was created from rhizosphere samples taken from SERR symptomatic or asymptomatic maize plants. The complete collection was screened for potential activity against Fv using a liquid antagonism assay followed by dual cultures in solid medium, selecting for 42 bacteria (Bacillus, Pseudomonas and Paenibacillus) that inhibit Fv growth (>45 %). In planta assays demonstrated that three Bacillus isolates: B. megaterium (B5), B. cereus sensu lato (B25) and Bacillus sp. (B35) displayed the highest antagonistic activity against Fv. Pot experiments performed in a greenhouse with Bacillus cereus sensu lato B25 confirmed these findings and showed a reduction of Fv disease severity and incidence on plants. Antagonistic activity analysis revealed that these strains produce glucanases, proteases or chitinases, as well as siderophores and auxins and suggests these as possible control mechanisms against Fv.

Biocontrol, an alternative to chemical control against plant pathogens, may also improve plant health and enhance fruit yield. Tomato production in open fields or greenhouses is constrained by the pathogens Fusarium oxysporum f. sp. lycopersici race 3 (Fol R3) and F. oxysporum f. sp. radicis-lycopersici (Forl). In this work, we studied the biocontrol effect of the antagonistic bacteria Acinetobacter calcoaceticus AcDB3, Bacillus thuringiensis BtMB9, B. subtilis BsTA16, and B. amyloliquefaciens BaMA26 in field trials with four tomato hybrids over two consecutive growing seasons (2019–2020 and 2020–2021). The effect of these bacteria on plant growth was also evaluated. The presence of F. oxysporum in field soil and/or infected plants was confirmed microbiologically. All four bacterial strains significantly suppressed the severity of Fusarium crown and root rot of tomato (FCRRT) and Fusarium wilt symptoms, as well as increased tomato yield under field conditions. Among the four strains, B. subtilis BsTA16 showed the highest reduction in symptoms of Fusarium wilt (68%) and FCRRT (74%). To the best of our knowledge, this is the first report of biological control agents (BCAs) exerting antagonistic activity against both FCRRT caused by Forl and Fusarium wilt caused by Fol in tomato under field conditions.

Sorghum (Sorghum bicolor) leaf sheath blight was observed for the first time in Sinaloa, Mexico in the summer of 2020. Fungal isolates were obtained from symptomatic tissue in potato dextrose agar. Fusarium spp. were associated with symptomatic plants in 10 sampling sites under field conditions. No root and stalk rot was observed during the sampling period. Analysis of fragments of the translation elongation factor alpha and RNA polymerase II second largest subunit genes indicated that all isolates belong to the Fusarium fujikuroi species complex (FFSC). Five groups were delineated from this complex: F. thapsinum, F. verticillioides, Fusarium sp. (four isolates), Fusarium sp. 4 (Fus4), and Fusarium sp. (Fus16), which is closely related to Fusarium madaense. The morphological characteristics (colony color and morphometry of conidia) of isolates with sequence similarities to those of F. thapsinum and F. verticillioides were in the expected range for these species. The morphology of isolates Fus7a, Fus7b, Fus11, and Fus17, as well as Fus4 and Fus16, were similar to those of the FFSC, specially to F. andiyazi and F. madaense. Inoculations of sorghum with representative isolates of F. thapsinum, F. verticillioides and the unidentified Fusarium species resulted in reddish brown lesions similar to those observed under field conditions; the original isolates inoculated were reisolated fulfilling the Koch’s postulates. Although leaf sheaths on sorghum plants were heavily damaged, root and stalk rot were not observed in the greenhouse inoculations or under field conditions. Future research should focus on determining the identity of the unknown Fusarium spp. to design control measures for the disease. This is the first report of Fusarium spp. causing sorghum leaf sheath blight in Mexico.

Wild sunflower is a common weed that grows among agricultural crops in many parts of the world, where it is both highly invasive and competitive and can serve as a reservoir for plant pathogens. Recently, signs of powdery mildew (PM) were observed on wild sunflower plants in Sinaloa, Mexico. The aim of this study was to identify the causal agent based on morphology and molecular techniques, and to determine pathogenicity on sunflower plants. Phylogenetic analysis of the ITS region grouped the sequences within lineage III of the genus Golovinomyces, which comprises pathogenic species of the plant tribe Heliantheae of Asteraceae. However, within this lineage, the three species belonging to this group: G. circumfusus, G. ambrosiae and G. spadiceus, cannot be differentiated based on the ITS region due to their close phylogenetic relationship. Morphometric analyses, particularly conidium size and germ tube morphology, confirmed the identity of the fungus infecting wild sunflowers as G. spadiceus. Inoculation tests under greenhouse conditions confirmed the pathogenicity of G. spadiceus in wild sunflower and in the commercial sunflower hybrid SYN3950HO. Signs of powdery mildew displayed on sunflower were similar to those observed under field conditions and in two independent inoculation tests. Our results confirm that wild sunflower is a potential source of G. spadiceus inoculum for commercial sunflower during the autumn–winter growing season.