Both fish gills and guts can support lots of microbiota that play important roles in the health and growth of hosts. Although the microbiota of silver carp has been widely studied, the data on microbial variation according to fish tissues and local habitats are lacking. In this study, the microbes in the guts and gills of silver carp (Hypophthalmichthys molitrix) from the hydrophyte-dominated region (zone H) and the algae-dominated region (zone A) of Taihu Lake in autumn were analyzed. Proteobacteria, Cyanobacteria, and Firmicutes were the dominant bacteria in silver carp. The microbial diversity was higher in the gills than that in the intestines, and higher in fish from zone H than that from zone A. Beta diversity analysis revealed significant differences in microbial community structures between gill and guts, and between fish from the two habitats. Gills had a higher abundance of phyla Actinobacteria, Bacteroidetes, and Deinococcus-Thermus, and a lower abundance of verrucomicrobia than the intestine. Both tissues possessed indicator taxa, while many indicator taxa in the gill were conditional pathogens. Compared to fish from zone H, fish from zone A had more abundant Cyanobacteria, and less abundant Proteobacteria and Bacteroidetes. PICRUSt2 analysis revealed that fish microbial functions were mainly associated with metabolism, replication, repair, folding, sorting, and degradation. These results showed that the microbial community of silver carp from Taihu Lake varied according to tissues and habitats.

The removal of the net enclosure has been used as a lake management strategy in various regions of China as ecological development is given more attention. Nevertheless, little is known about the substantive impact of this measure on fish communities in inland lakes. To this end, the fish community composition and structural features after the removal of the net enclosure in Gehu Lake were explored and evaluated in this study from 2021 to 2022 and compared to the investigation before the net enclosure removal from 2017 to 2018. Belonging to 7 orders, 10 families, and 46 species, a total of 17,151 fish were collected, with pelagic, sedentary, and omnivorous species dominating. In comparison, the number of species increased by 10 after removal, and fish alpha diversity increased. The Index of Relative Importance (IRI) revealed that the composition of dominating species remained constant, including Coilia nasus, Hypophthalmichthys molitrix, and Hypophthalmichthys nobilis; Parabramis pekinensis, Megalobrama amblycephal, and Culter mongolicus were upgraded from common species to general species. Culter alburnus, Hemiculter bleekeri, and Pseudobrama simoni were downgraded from general species to common species. Elopichthys bambusa had become a common species (IRI = 109.35), which was not discovered before removal. According to the hierarchical clustering (HC) and non-metric multidimensional sequencing (NMDS), the fish community of the northern reserve was highly aggregated. As the Abundance Biomass Comparison (ABC) curve and biodiversity index indicated, the fish community structure of the whole lake was in a state of moderate anthropogenic disturbance with reduced stability, while that of the northern reserve was in a state of light anthropogenic disturbance with greater stability. The number of fish species increased in this survey compared to the period before removal, species and dominant species composition altered dramatically, and total lake stability declined. This study demonstrates that the fish diversity in Gehu Lake increased after the removal of the net enclosure. Meanwhile, the stability of the fish community structure was decreased temporarily. Lake restoration is a long-term process, and the underlying impact of the removal of the net enclosure still requires continuous monitoring and further studies.

Live fish transport easily induces severe physiological stress, marked by pronounced oxidative damage and significant mortality, leading to substantial economic losses annually. Here, we evaluated the effects of taurine intake on alleviating stress response during transportation of Culter alburnus. Juvenile fish were fed diets containing 0 (control), 0.5, 1.0, 1.5, or 2.0 g/kg taurine for 8 weeks before undergoing 12 h of simulated transport. The results showed that taurine supplementation significantly improved growth performance in a dose-dependent manner. During transportation, the deterioration of water quality and the damage of gill tissue decreased with the increase in concentration. The determination of catalase (CAT), glutathione peroxidase (GSH-Px) and malondialdehyde (MDA) showed that 2.0 g/kg taurine improved antioxidant capacity. The high-concentration taurine group enhanced the activities of immune enzymes such as acid phosphatase (ACP) and alkaline phosphatase (AKP), while the activity of total nitric oxide synthase (T-NOS) was inhibited. The antioxidant immune effect of the 0.5 g/kg and 1.0 g/kg concentration groups was not obvious. Transcriptome analysis revealed that 2.0 g/kg taurine enhanced the antioxidative stress capacity of C. alburnus by upregulating the expression of immune-related genes (TLR5, Il12b) and activating the Toll-like receptor signaling pathway as well as the cytokine–cytokine receptor interaction pathway. These findings demonstrated that dietary taurine improved resilience to transport stress in C. alburnus.

Ecological floating beds are effective in mitigating lake eutrophication. To examine the effects of their in situ remediation processes on the food sources and trophic structures of consumers, particularly fish, this study used stable isotope techniques to compare cage enclosures, net enclosures, and natural lake area in Meiliang Bay, Lake Taihu. The results revealed that among basic carbon sources, only the δ¹³C values of phytoplankton and POM differed significantly, while most consumers showed no significant differences in carbon and nitrogen stable isotope characteristics across the three remediation areas. In cage enclosures, the food chain transitioned from being grazing-based, dominated by phytoplankton, to detritus-based, primarily relying on SOM. In contrast, net enclosures enhanced the utilization of phytoplankton. The trophic levels of most consumers in cage enclosures were significantly lower than those in net enclosures and the natural lake area. Trophic niche indices indicated that cage enclosures exhibited the highest trophic diversity and the lowest trophic redundancy. The in situ remediation using ecological floating beds altered the food resource conditions within the remediation areas due to differences in the degree of enclosure provided by the floating beds and interception facilities. These changes have consequently reshaped the internal trophic structure through trophic cascade effects.