Tadashi Yokoyama

Dr. Tadashi Yokoyama

The Faculty of Food and Agricultural Science, Fukushima UniversityKanayagawa 1, Fukushima city, Fukushima 960-1296, Japan
orcid

Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 February 2014 in Plant and Soil
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Journal Article
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SHSafiullah Habibi
Safiullah Habibi
SDSalem Djedidi
Salem Djedidi
KPKunlayakorn Prongjunthuek
Kunlayakorn Prongjunthuek
FMFiroz Mortuza
Firoz Mortuza
NONaoko Ohkama-Ohtsu
Naoko Ohkama-Ohtsu
Tadashi YokoyamaTadashi Yokoyama
Tadashi Yokoyama

1 January 2019 in Microbes and Environments
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Journal Article
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SHSafiullah Habibi
Safiullah Habibi
SDSalem Djedidi
Salem Djedidi
NONaoko Ohkama-Ohtsu
Naoko Ohkama-Ohtsu
WSWakil Ahmad Sarhadi
Wakil Ahmad Sarhadi
KKKatsuhiro Kojima
Katsuhiro Kojima
Tadashi YokoyamaTadashi Yokoyama
Tadashi Yokoyama
To develop biofertilizers for rice in Afghanistan, 98 plant growth-promoting rhizobacteria were isolated from rice plants and their morphological and physiological characteristics, such as indole-3-acetic acid production, acetylene reduction, phosphate and potassium solubilization, and siderophore production, were evaluated. The genetic diversity of these bacteria was also analyzed based on 16S rRNA gene sequences. Of 98 bacteria, 89.7% produced IAA, 54.0% exhibited nitrogenase activity, and 40% showed phosphate solubilization and siderophore production. Some isolates assigned to Pseudomonas (brassicacearum, chengduensis, plecoglossicida, resinovorans, and straminea) formed a relationship with rice, and P. resinovorans and P. straminea showed nitrogen fixation. Rhizobium borbori and R. rosettiformans showed a relationship with rice plants and nitrogen fixation. Among the isolates examined, AF134 and AF137 belonging to Enterobacter ludwigii and P. putida produced large amounts of IAA (92.3 μg mL–1) and exhibited high nitrogenase activity (647.4 nmol C2H4 h–1), respectively. In the plant growth test, more than 70% of the inoculated isolates showed significantly increased root and shoot dry weights. Highly diverse bacterial isolates showing promising rice growth-promoting traits were obtained from Afghanistan alkaline soils.

8 July 2014 in Journal of Plant Research
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Journal Article
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SDSalem Djedidi
Salem Djedidi
KKKatsuhiro Kojima
Katsuhiro Kojima
HYHiroko Yamaya
Hiroko Yamaya
NONaoko Ohkama-Ohtsu
Naoko Ohkama-Ohtsu
SBSonoko Dorothea Bellingrath-Kimura
Sonoko Dorothea Bellingrath-Kimura
Tadashi YokoyamaTadashi Yokoyama
Tadashi Yokoyama

6 August 2022 in The Plant Journal
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Journal Article
Open access
TITakehiro Ito
Takehiro Ito
TKTaisuke Kitaiwa
Taisuke Kitaiwa
KNKosuke Nishizono
Kosuke Nishizono
MUMinori Umahashi
Minori Umahashi
SMShunsuke Miyaji
Shunsuke Miyaji
NONaoko Ohtsu
Naoko Ohtsu
SUMMARY: Glutathione (GSH) functions as a major sulfur repository and hence occupies an important position in primary sulfur metabolism. GSH degradation results in sulfur reallocation and is believed to be carried out mainly by γ‐glutamyl cyclotransferases (GGCT2;1, GGCT2;2, and GGCT2;3), which, however, do not fully explain the rapid GSH turnover. Here, we discovered that γ‐glutamyl peptidase 1 (GGP1) contributes to GSH degradation through a yeast complementation assay. Recombinant proteins of GGP1, as well as GGP3, showed high degradation activity of GSH, but not of oxidized glutathione (GSSG), in vitro. Notably, the GGP1 transcripts were highly abundant in rosette leaves, in agreement with the ggp1 mutants constantly accumulating more GSH regardless of nutritional conditions. Given the lower energy requirements of the GGP‐ than the GGCT‐mediated pathway, the GGP‐mediated pathway could be a more efficient route for GSH degradation than the GGCT‐mediated pathway. Therefore, we propose a model wherein cytosolic GSH is degraded chiefly by GGP1 and likely also by GGP3. Another noteworthy fact is that GGPs are known to process GSH conjugates in glucosinolate and camalexin synthesis; indeed, we confirmed that the ggp1 mutant contained higher levels of O‐acetyl‐l‐Ser, a signaling molecule for sulfur starvation, and lower levels of glucosinolates and their degradation products. The predicted structure of GGP1 further provided a rationale for this hypothesis. In conclusion, we suggest that GGP1 and possibly GGP3 play vital roles in both primary and secondary sulfur metabolism.

4 October 2018 in Agronomy
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KWKhin Thuzar Win
Khin Thuzar Win
AOAung Zaw Oo
Aung Zaw Oo
NONaoko Ohtsu
Naoko Ohtsu
Tadashi YokoyamaTadashi Yokoyama
Tadashi Yokoyama
The aims of this study were to boost growth attributes, yield, and nutrient uptake of rice in paddy fields using a combination of Bacillus pumilus strain TUAT-1 biofertilizer and different nitrogen (N) application rates in nursery boxes. Bacillus pumilus strain TUAT-1 was applied as an inoculant biofertilizer in conjunction with different rates of N fertilizer to rice seedlings in a nursery. Plant growth and yield parameters were evaluated at two stages: in 21-day-old nursery seedlings and in mature rice plants growing in a paddy field. Inoculation with TUAT-1 significantly increased the seedling growth and root morphology of 21-day-old nursery seedlings. There was a marked increase in chlorophyll content, plant height, number of tillers, and tiller biomass of rice plants with the use of TUAT-1 and N fertilizers alone, and their combinations, at the maximum tillering stage in the field. The combination of TUAT-1 and 100% N (farmer recommended rate of N) resulted in the greatest tiller number and biomass at the maximum tillering stage, and positively affected other growth attributes and yield. The growth and yield were similar in the TUAT-1 + 50% N and 100% N (uninoculated) treatments, because TUAT-1 promoted root development, which increased nutrient uptake from the soil. These results suggest that the B. pumilus strain TUAT-1 has a potential to enhance the nutritional uptake of rice by promoting the growth and development of roots.

1 January 2019 in Microbes and Environments
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Journal Article
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MRMaría Daniela Artigas Ramírez
María Daniela Artigas Ramírez
MEMingrelia España
Mingrelia España
CAClaudia Aguirre
Claudia Aguirre
KKKatsuhiro Kojima
Katsuhiro Kojima
NONaoko Ohkama-Ohtsu
Naoko Ohkama-Ohtsu
Tadashi YokoyamaTadashi Yokoyama
Tadashi Yokoyama
The climate, topography, fauna, and flora of Venezuela are highly diverse. However, limited information is currently available on the characterization of soybean rhizobia in Venezuela. To clarify the physiological and genetic diversities of soybean rhizobia in Venezuela, soybean root nodules were collected from 11 soil types located in different topographical regions. A total of 395 root nodules were collected and 120 isolates were obtained. All isolates were classified in terms of stress tolerance under different concentrations of NaCl and Al3+. The tolerance levels of isolates to NaCl and Al3+ varied. Based on sampling origins and stress tolerance levels, 44 isolates were selected for further characterization. An inoculation test indicated that all isolates showed the capacity for root nodulation on soybean. Based on multilocus sequence typing (MLST), 20 isolates were classified into the genera Rhizobium and Bradyrhizobium. The remaining 24 isolates were classified into the genus Burkholderia or Paraburkholderia. There is currently no evidence to demonstrate that the genera Burkholderia and Paraburkholderia are the predominant soybean rhizobia in agricultural fields. Of the 24 isolates classified in (Para) Burkholderia, the nodD–nodB intergenic spacer regions of 10 isolates and the nifH gene sequences of 17 isolates were closely related to the genera Rhizobium and Bradyrhizobium, respectively. The root nodulation numbers of five (Para) Burkholderia isolates were higher than those of the 20 α-rhizobia. Furthermore, among the 44 isolates tested, one Paraburkholderia isolate exhibited the highest nitrogen-fixation activity in root nodules.