Dmitry Kostyushev

Dmitry Kostyushev


Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
Verified
Journal Article
Open access
PDF file
SBSergey Brezgin
Sergey Brezgin
AKAnastasiya Kostyusheva
Anastasiya Kostyusheva
DKDmitry Kostyushev
Dmitry Kostyushev
Vladimir ChulanovVladimir Chulanov
Vladimir Chulanov
The gene editing tool CRISPR-Cas has become the foundation for developing numerous molecular systems used in research and, increasingly, in medical practice. In particular, Cas proteins devoid of nucleolytic activity (dead Cas proteins; dCas) can be used to deliver functional cargo to programmed sites in the genome. In this review, we describe current CRISPR systems used for developing different dCas-based molecular approaches and summarize their most significant applications. We conclude with comments on the state-of-art in the CRISPR field and future directions.

23 January 2019 in Cellular and Molecular Life Sciences
Verified
Journal Article
Closed access
PDF file
DKDmitry Kostyushev
Dmitry Kostyushev
SBSergey Brezgin
Sergey Brezgin
AKAnastasiya Kostyusheva
Anastasiya Kostyusheva
DZDmitry Zarifyan
Dmitry Zarifyan
IGIrina Goptar
Irina Goptar
Vladimir ChulanovVladimir Chulanov
Vladimir Chulanov

1 January 2021 in Emerging Microbes & Infections
Verified
Journal Article
Open access
AKAnastasiya Kostyusheva
Anastasiya Kostyusheva
SBSergey Brezgin
Sergey Brezgin
DGDieter Glebe
Dieter Glebe
DKDmitry Kostyushev
Dmitry Kostyushev
VCVladimir Chulanov
Vladimir Chulanov
Hepatitis B virus (HBV) is a DNA virus with a complex life cycle that includes a reverse transcription step. HBV is poorly sensed by the immune system and frequently establishes persistent infection that can cause chronic infection, the leading cause of liver cancer and cirrhosis worldwide. Recent mounting evidence has indicated the growing importance of RNA methylation (m6A modification) in viral replication, immune escape, and carcinogenesis. The value of m6A RNA modification for the prediction and clinical management of chronic HBV infection remains to be assessed. However, a number of studies indicate the important role of m6A-marked transcripts and factors of m6A machinery in managing HBV-related pathologies. In this review, we discuss the fundamental and potential clinical impact of m6A modifications on HBV infection and pathogenesis, as well as highlight the important molecular techniques and tools that can be used for studying RNA m6A methylome.

Verified
Journal Article
Open access
PDF file
DKDmitry Kostyushev
Dmitry Kostyushev
AKAnastasiya Kostyusheva
Anastasiya Kostyusheva
SBSergey Brezgin
Sergey Brezgin
VSValery Smirnov
Valery Smirnov
EVElena Volchkova
Elena Volchkova
Vladimir ChulanovVladimir Chulanov
Vladimir Chulanov
CRISPR/Cas technologies have advanced dramatically in recent years. Many different systems with new properties have been characterized and a plethora of hybrid CRISPR/Cas systems able to modify the epigenome, regulate transcription, and correct mutations in DNA and RNA have been devised. However, practical application of CRISPR/Cas systems is severely limited by the lack of effective delivery tools. In this review, recent advances in developing vehicles for the delivery of CRISPR/Cas in the form of ribonucleoprotein complexes are outlined. Most importantly, we emphasize the use of extracellular vesicles (EVs) for CRISPR/Cas delivery and describe their unique properties: biocompatibility, safety, capacity for rational design, and ability to cross biological barriers. Available molecular tools that enable loading of desired protein and/or RNA cargo into the vesicles in a controllable manner and shape the surface of EVs for targeted delivery into specific tissues (e.g., using targeting ligands, peptides, or nanobodies) are discussed. Opportunities for both endogenous (intracellular production of CRISPR/Cas) and exogenous (post-production) loading of EVs are presented.

7 October 2024 in Pharmaceutics
Verified
Journal Article
Open access
PDF file
ATAndrey Tikhonov
Andrey Tikhonov
AKArtyom Kachanov
Artyom Kachanov
AYAlexandra Yudaeva
Alexandra Yudaeva
Oleg DanilikOleg Danilik
Oleg Danilik
NPNatalia Ponomareva
Natalia Ponomareva
DKDmitry Kostyushev
Dmitry Kostyushev
Biomimetic nanoparticles (BMNPs) are innovative nanovehicles that replicate the properties of naturally occurring extracellular vesicles, facilitating highly efficient drug delivery across biological barriers to target organs and tissues while ensuring maximal biocompatibility and minimal-to-no toxicity. BMNPs can be utilized for the delivery of therapeutic payloads and for imparting novel properties to other nanotechnologies based on organic and inorganic materials. The application of specifically modified biological membranes for coating organic and inorganic nanoparticles has the potential to enhance their therapeutic efficacy and biocompatibility, presenting a promising pathway for the advancement of drug delivery technologies. This manuscript is grounded in the fundamentals of biomimetic technologies, offering a comprehensive overview and analytical perspective on the preparation and functionalization of BMNPs, which include cell membrane-coated nanoparticles (CMCNPs), artificial cell-derived vesicles (ACDVs), and fully synthetic vesicles (fSVs). This review examines both “top-down” and “bottom-up” approaches for nanoparticle preparation, with a particular focus on techniques such as cell membrane coating, cargo loading, and microfluidic fabrication. Additionally, it addresses the technological challenges and potential solutions associated with the large-scale production and clinical application of BMNPs and related technologies.

20 February 2023 in Biotechnology Advances
Verified
Journal Article
Closed access
SBSergey Brezgin
Sergey Brezgin
APAlessandro Parodi
Alessandro Parodi
AKAnastasiya Kostyusheva
Anastasiya Kostyusheva
NPNatalia Ponomareva
Natalia Ponomareva
ALAlexander Lukashev
Alexander Lukashev
DKDmitry Kostyushev
Dmitry Kostyushev