Fayyaz Ahamed

Mr. Fayyaz Ahamed

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 September 2018 in Cancers
Verified
Journal Article
Open access
PDF file
RSRenuka Sriram
Renuka Sriram
JGJeremy Gordon
Jeremy Gordon
CBCeline Baligand
Celine Baligand
FAFayyaz Ahamed
Fayyaz Ahamed
JSJustin Delos Santos
Justin Delos Santos
ZWZhen Wang
Zhen Wang
Optimal treatment selection for localized renal tumors is challenging due to their variable biological behavior and limited ability to pre-operatively assess their aggressiveness. We investigated hyperpolarized (HP) 13C pyruvate MRI to noninvasively assess tumor lactate production and compartmentalization, which are strongly associated with renal tumor aggressiveness. Orthotopic tumors were created in mice using human renal cell carcinoma (RCC) lines (A498, 786-O, UOK262) with varying expression of lactate dehydrogenase A (LDHA) which catalyzes the pyruvate-to-lactate conversion, and varying expression of monocarboxylate transporter 4 (MCT4) which mediates lactate export out of the cells. Dynamic HP 13C pyruvate MRI showed that the A498 tumors had significantly higher 13C pyruvate-to-lactate conversion than the UOK262 and 786-O tumors, corresponding to higher A498 tumor LDHA expression. Additionally, diffusion-weighted HP 13C pyruvate MRI showed that the A498 tumors had significantly higher 13C lactate apparent diffusion coefficients compared to 786-O tumors, with corresponding higher MCT4 expression, which likely reflects more rapid lactate export in the A498 tumors. Our data demonstrate the feasibility of HP 13C pyruvate MRI to inform on tumor lactate production and compartmentalization, and provide the scientific premise for future clinical investigation into the utility of this technique to noninvasively interrogate renal tumor aggressiveness and to guide treatment selection.

26 February 2020 in Cancers
Verified
Journal Article
Open access
PDF file
RSRenuka Sriram
Renuka Sriram
MCMark Van Criekinge
Mark Van Criekinge
JSJustin DeLos Santos
Justin DeLos Santos
FAFayyaz Ahamed
Fayyaz Ahamed
HQHecong Qin
Hecong Qin
JKJohn Kurhanewicz
John Kurhanewicz
Non-invasive assessment of the biological aggressiveness of prostate cancer (PCa) is needed for men with localized disease. Hyperpolarized (HP) 13C magnetic resonance (MR) spectroscopy is a powerful approach to image metabolism, specifically the conversion of HP [1-13C]pyruvate to [1-13C]lactate, catalyzed by lactate dehydrogenase (LDH). Significant increase in tumor lactate was measured in high-grade PCa relative to benign and low-grade cancer, suggesting that HP 13C MR could distinguish low-risk (Gleason score ≤3 + 4) from high-risk (Gleason score ≥4 + 3) PCa. To test this and the ability of HP 13C MR to detect these metabolic changes, we cultured prostate tissues in an MR-compatible bioreactor under continuous perfusion. 31P spectra demonstrated good viability and dynamic HP 13C-pyruvate MR demonstrated that high-grade PCa had significantly increased lactate efflux compared to low-grade PCa and benign prostate tissue. These metabolic differences are attributed to significantly increased LDHA expression and LDH activity, as well as significantly increased monocarboxylate transporter 4 (MCT4) expression in high- versus low- grade PCa. Moreover, lactate efflux, LDH activity, and MCT4 expression were not different between low-grade PCa and benign prostate tissues, indicating that these metabolic alterations are specific for high-grade disease. These distinctive metabolic alterations can be used to differentiate high-grade PCa from low-grade PCa and benign prostate tissues using clinically translatable HP [1-13C]pyruvate MR.

7 December 2021 in IEEE Transactions on Neural Systems and Rehabilitation Engineering
Verified
Journal Article
Open access
LHLaura A. Hallock
Laura A. Hallock
BSBhavna Sud
Bhavna Sud
CMChris Mitchell
Chris Mitchell
EHEric Hu
Eric Hu
FAFayyaz Ahamed
Fayyaz Ahamed
RBRuzena Bajcsy
Ruzena Bajcsy
Despite the utility of musculoskeletal dynamics modeling, there exists no safe, noninvasive method of measuring in vivo muscle output force in real time — limiting both biomechanical insight into dexterous motion and intuitive control of assistive devices. In this paper, we demonstrate that muscle deformation constitutes a promising, yet unexplored signal from which to 1) infer such forces and 2) build novel device control schemes. Through a case study of the elbow joint on a preliminary cohort of 10 subjects, we show that muscle deformation (specifically, thickness change of the brachioradialis, as measured via ultrasound and tracked via optical flow) correlates well with elbow output force to an extent comparable with standard surface electromyography (sEMG) activation during varied isometric elbow contraction. We then show that, given real-time visual feedback, subjects can readily perform a trajectory tracking task using this deformation signal, and that they largely prefer this method to a comparable sEMG-based control scheme and perform the tracking task with similar accuracy. Together, these contributions illustrate muscle deformation’s potential utility for both biomechanical study of individual muscle dynamics and device control, in a manner that — thanks to, unlike sEMG, the localized nature of the signal and its tight mechanistic coupling to output force — is readily extensible to multiple muscles and device degrees of freedom. To enable such future extensions, all modeling, tracking, and visualization software described in this paper, as well as all raw and processed data, have been made available on SimTK as part of the Open-Arm project ( https://simtk.org/projects/openarm ) for general research use.

22 April 2022 in Urology
Verified
Journal Article
Closed access
FAFayyaz Ahamed
Fayyaz Ahamed
ABAshwin S. Balakrishnan
Ashwin S. Balakrishnan
JMJorge Mena
Jorge Mena
BBBenjamin N. Breyer
Benjamin N. Breyer
NSNathan M. Shaw
Nathan M. Shaw