Vikash Kumar

Mr. Vikash Kumar

ICAR-Central Inland Fisheries Research Institute (CIFRI), Barrackpore 700120, India
orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 July 2021 in Toxins
Verified
Journal Article
Open access
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Vikash KumarVikash Kumar
Vikash Kumar
SRSuvra Roy
Suvra Roy
Bijay Kumar BeheraBijay Kumar Behera
Bijay Kumar Behera
PBPeter Bossier
Peter Bossier
Basanta Kumar DasBasanta Kumar Das
Basanta Kumar Das
Shrimp, as a high-protein animal food commodity, are one of the fastest growing food producing sectors in the world. It has emerged as a highly traded seafood product, currently exceeding 8 MT of high value. However, disease outbreaks, which are considered as the primary cause of production loss in shrimp farming, have moved to the forefront in recent years and brought socio-economic and environmental unsustainability to the shrimp aquaculture industry. Acute hepatopancreatic necrosis disease (AHPND), caused by Vibrio spp., is a relatively new farmed penaeid shrimp bacterial disease. The shrimp production in AHPND affected regions has dropped to ~60%, and the disease has caused a global loss of USD 43 billion to the shrimp farming industry. The conventional approaches, such as antibiotics and disinfectants, often applied for the mitigation or cure of AHPND, have had limited success. Additionally, their usage has been associated with alteration of host gut microbiota and immunity and development of antibiotic resistance in bacterial pathogens. For example, the Mexico AHPND-causing V. parahaemolyticus strain (13-306D/4 and 13-511/A1) were reported to carry tetB gene coding for tetracycline resistance gene, and V. campbellii from China was found to carry multiple antibiotic resistance genes. As a consequence, there is an urgent need to thoroughly understand the virulence mechanism of AHPND-causing Vibrio spp. and develop novel management strategies to control AHPND in shrimp aquaculture, that will be crucially important to ensure food security in the future and offer economic stability to farmers. In this review, the most important findings of AHPND are highlighted, discussed and put in perspective, and some directions for future research are presented.

21 June 2016 in Reviews in Fisheries Science & Aquaculture
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Journal Article
Closed access
Vikash KumarVikash Kumar
Vikash Kumar
SRSuvra Roy
Suvra Roy
DMDharmendra Kumar Meena
Dharmendra Kumar Meena
USUttam Kumar Sarkar
Uttam Kumar Sarkar
Shrimp aquaculture is the fastest growing animal food producing sectors in the world due to its high demand in developed countries; however, they are affected by diseases mainly caused by opportunistic pathogens results in huge economic losses. Today preventive and management measures are central concern to overcome such outbreak of diseases. The adverse effect of chemotherapeutics in shrimp farming has drawn attention for the development of non-antibiotic and environment friendly agents, which is one of the key factors for health management in shrimp aquaculture. In recent years, application of probiotics against virus and bacteria in shrimp farming had been a novel and safe approach since they promote the innate immune response. Probiotics for bacterial diseases like vibriosis is well reported, but for viral diseases, the authentic strains still need research. Apart from the discovery of new or better formulations, improvement in the probiotic benefits may be helpful. Thus, better and economic production methods, administration ways or combination with other preventive/therapeutic measures are welcomed. Further studies are still necessary to increase the knowledge about use of probiotics to control bacterial infections in shrimp but much more efforts are needed in the case of viral diseases. In this review, potential application of probiotics in shrimp aquaculture: importance, mechanisms of action and methods of administration are being focused. The article also explains the limitations and prospects of probiotics in sustainable and ecofriendly shrimp culture to augment the total shrimp aquaculture production.

3 November 2022 in Life
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Journal Article
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Vikash KumarVikash Kumar
Vikash Kumar
Suvra RoySuvra Roy
Suvra Roy
Bijay Kumar BeheraBijay Kumar Behera
Bijay Kumar Behera
Basanta Kumar DasBasanta Kumar Das
Basanta Kumar Das
Heat shock proteins (Hsps) are a family of ubiquitously expressed stress proteins and extrinsic chaperones that are required for viability and cell growth in all living organisms. These proteins are highly conserved and produced in all cellular organisms when exposed to stress. Hsps play a significant role in protein synthesis and homeostasis, as well as in the maintenance of overall health in crustaceans against various internal and external environmental stresses. Recent reports have suggested that enhancing in vivo Hsp levels via non-lethal heat shock, exogenous Hsps, or plant-based compounds, could be a promising strategy used to develop protective immunity in crustaceans against both abiotic and biotic stresses. Hence, Hsps as the agent of being an immune booster and increasing disease resistance will present a significant advancement in reducing stressful conditions in the aquaculture system.

24 June 2020 in Frontiers in Microbiology
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Journal Article
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Vikash KumarVikash Kumar
Vikash Kumar
MWMathieu Wille
Mathieu Wille
TLTânia Margarida Lourenço
Tânia Margarida Lourenço
PBPeter Bossier
Peter Bossier
The biofloc system is a relatively new aquaculture technology that offers practical solution to maintain culture water quality by recycling nutrients and improves the health status and resistance of shrimps against microbial infection, yet the mode of action involved remains unclear. This study aimed to unravel the underlying mechanism behind the protective effect of a biofloc system using Litopenaeus vannamei and acute hepatopancreatic necrosis disease (AHPND)-causing Vibrio parahaemolyticus M0904 strain as a host-pathogen model. The results showed that a biofloc system maintained at a C/N ratio of 15, improves the water quality and contributes to the nutrition of cultured animals as bioflocs might serve as an additional protein source. Furthermore, the study demonstrated that the biofloc system enhances the survival of L. vannamei upon challenge with a V. parahaemolyticus AHPND strain. Remarkably, the results highlight that in the biofloc system, AHPND-causing V. parahaemolyticus possibly switch from free-living virulent planktonic phenotype to a non-virulent biofilm phenotype, as demonstrated by a decreased transcription of flagella-related motility genes (flaA, CheR, and fliS), Pir toxin (PirBVP), and AHPND plasmid genes (ORF14) and increased expression of the phenotype switching marker AlkPhoX gene in both in vitro and in vivo conditions. Taken together, results suggest that biofloc steer phenotype switching, contributing to the decreased virulence of V. parahaemolyticus AHPND strain toward shrimp postlarvae. This information reinforces our understanding about AHPND in a biofloc setting and opens the possibility to combat AHPND not only by trying to eliminate the AHPND-causing V. parahaemolyticus from the system but rather to steer the phenotypic switch.

9 December 2019 in Toxins
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Journal Article
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Vikash KumarVikash Kumar
Vikash Kumar
LBLobke De Bels
Lobke De Bels
LCLiesbeth Couck
Liesbeth Couck
Kartik BaruahKartik Baruah
Kartik Baruah
PBPeter Bossier
Peter Bossier
WBWim Van Den Broeck
Wim Van Den Broeck
Acute hepatopancreatic necrosis disease (AHPND), a newly emergent farmed penaeid shrimp bacterial disease originally known as early mortality syndrome (EMS), is causing havoc in the shrimp industry. The causative agent of AHPND was found to be a specific strain of bacteria, e.g., Vibrio and Shewanella sps., that contains pVA1 plasmid (63–70 kb) encoding the binary PirAVP and PirBVP toxins. The PirABVP and toxins are the primary virulence factors of AHPND-causing bacteria that mediates AHPND and mortality in shrimp. Hence, in this study using a germ-free brine shrimp model system, we evaluated the PirABVP toxin-mediated infection process at cellular level, including toxin attachment and subsequent toxin-induced damage to the digestive tract. The results showed that, PirABVP toxin binds to epithelial cells of the digestive tract of brine shrimp larvae and produces characteristic symptoms of AHPND. In the PirABVP-challenged brine shrimp larvae, shedding or sloughing of enterocytes in the midgut and hindgut regions was regularly visualized, and the intestinal lumen was filled with moderately electron-dense cells of variable shapes and sizes. In addition, the observed cellular debris in the intestinal lumen of the digestive tract was found to be of epithelial cell origin. The detailed morphology of the digestive tract demonstrates further that the PirABVP toxin challenge produces focal to extensive necrosis and damages epithelial cells in the midgut and hindgut regions, resulting in pyknosis, cell vacuolisation, and mitochondrial and rough endoplasmic reticulum (RER) damage to different degrees. Taken together, our study provides substantial evidence that PirABVP toxins bind to the digestive tract of brine shrimp larvae and seem to be responsible for generating characteristic AHPND lesions and damaging enterocytes in the midgut and hindgut regions.

14 April 2023 in Pathogens
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Journal Article
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Bijay Kumar BeheraBijay Kumar Behera
Bijay Kumar Behera
SPSatya Narayan Parida
Satya Narayan Parida
Vikash KumarVikash Kumar
Vikash Kumar
HSHimanshu S Swain
Himanshu S Swain
Pranaya Kumar ParidaPranaya Kumar Parida
Pranaya Kumar Parida
Basanta Kumar DasBasanta Kumar Das
Basanta Kumar Das
A case of severe mortality in farmed Labeo rohita was investigated to characterize the causative agent. We identified the bacterial strain as Aeromonas veronii isolated from the gut of infected L. rohita by biochemical assay, scanning electron microscopy and 16S rRNA gene sequence analysis. The in vivo challenge experiment showed that the LD50 of A. veronii was 2.2 × 104 CFU/fish. Virulence gene investigation revealed that the isolated A. veronii possesses Aerolysin, Cytotoxic enterotoxin, Serine protease, Dnase and Type III secretion system genes. The isolated strain was resistant to two antibiotics (ampicillin and dicloxacillin) while susceptible to 22 other antibiotics. The study further revealed that A. veronii induced both stresses along with non-specific and specific immune responses marked by elevated cortisol HSP70, HSP90 and IgM levels in the treated L. rohita fingerlings. Although the bacterial pathogen enhances the immune response, the negative effect on fish, including stress, and high mortality, create concern and a need for A. veronii management in L. rohita farms. The knowledge gained from this study would facilitate future research aimed at assessing the pathogenicity of A. veronii, with an emphasis on microbial disease management in other farmed fish species.