Sa-Yoon Park

Dr. Sa-Yoon Park

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 November 2018 in Molecules
Verified
Journal Article
Open access
PDF file
MPMusun park
Musun park
SPSa-Yoon Park
Sa-Yoon Park
Hae-Jeung LeeHae-Jeung Lee
Hae-Jeung Lee
Chang-Eop KimChang-Eop Kim
Chang-Eop Kim
Platycodon grandiflorum (PG) is widely used in Asia for its various beneficial effects. Although many studies were conducted to understand the molecular mechanisms of PG, it is still unclear how the combinations of multiple ingredients work together to exert its therapeutic effects. The aim of the present study was to provide a comprehensive review of the systems-level mechanisms of PG by adopting network pharmacological analysis. We constructed a compound–target–disease network for PG using experimentally validated and machine-leaning-based prediction results. Each target of the network was analyzed based on previously known pharmacological activities of PG. Gene ontology analysis revealed that the majority of targets were related to cellular and metabolic processes, responses to stimuli, and biological regulation. In pathway enrichment analyses of targets, the terms related to cancer showed the most significant enrichment and formed distinct clusters. Degree matrix analysis for target–disease associations of PG suggested the therapeutic potential of PG in various cancers including hepatocellular carcinoma, gastric cancer, prostate cancer, small-cell lung cancer, and renal cell carcinoma. We expect that network pharmacological approaches will provide an understanding of the systems-level mechanisms of medicinal herbs and further develop their therapeutic potentials.

Verified
Journal Article
Open access
PDF file
DLDahae Lee
Dahae Lee
Chang-Eop KimChang-Eop Kim
Chang-Eop Kim
SPSa-Yoon Park
Sa-Yoon Park
KKKem Ok Kim
Kem Ok Kim
NHNguyen Tuan Hiep
Nguyen Tuan Hiep
Ki Sung  KangKi Sung Kang
Ki Sung Kang
Preventive effects and corresponding molecular mechanisms of mugwort (Artemisia argyi) extract and its flavonoid constituents on contrast-induced nephrotoxicity were explored in the present study. We treated cultured LLC-PK1 cells with iodixanol to induce contrast-induced nephrotoxicity, and found that A. argyi extracts ameliorated the reduction in cellular viability following iodixanol treatment. The anti-apoptotic effect of A. argyi extracts on contrast-induced nephrotoxicity was mediated by the inhibition of mitogen-activated protein kinase (MAPK) phosphorylation and the activation of caspases. The flavonoid compounds isolated from A. argyi improved the viability of iodixanol-treated cells against contrast-induced nephrotoxicity. Seven compounds (1, 2, 3, 15, 16, 18, and 19) from 19 flavonoids exerted a significant protective effect. Based on the in silico oral-bioavailability and drug-likeness assessment, which evaluate the drug potential of these compounds, compound 2 (artemetin) showed the highest oral bioavailability (49.55%) and drug-likeness (0.48) values. We further investigated the compound–target–disease network of compound 2, and proliferator-activated receptor gamma (PPAR-γ) emerged as a predicted key marker for the treatment of contrast-induced nephrotoxicity. Consequently, compound 2 was the preferred candidate, and its protective effect was mediated by inhibiting the contrast-induced inflammatory response through activation of PPAR-γ and inhibition of MAPK phosphorylation and activation of caspases.

18 April 2025 in Journal of Medical Internet Research
Verified
Journal Article
Open access
JPJi Soo Park
Ji Soo Park
SPSa-Yoon Park
Sa-Yoon Park
JMJae Won Moon
Jae Won Moon
KWANGSOO KIMKWANGSOO KIM
KWANGSOO KIM
DSDong In Suh
Dong In Suh
Background: Pediatric respiratory diseases, including asthma and pneumonia, are major causes of morbidity and mortality in children. Auscultation of lung sounds is a key diagnostic tool but is prone to subjective variability. The integration of artificial intelligence (AI) and machine learning (ML) with electronic stethoscopes offers a promising approach for automated and objective lung sound. Objective: This systematic review and meta-analysis assess the performance of ML models in pediatric lung sound analysis. The study evaluates the methodologies, model performance, and database characteristics while identifying limitations and future directions for clinical implementation. Methods: A systematic search was conducted in Medline via PubMed, Embase, Web of Science, OVID, and IEEE Xplore for studies published between January 1, 1990, and December 16, 2024. Inclusion criteria are as follows: studies developing ML models for pediatric lung sound classification with a defined database, physician-labeled reference standard, and reported performance metrics. Exclusion criteria are as follows: studies focusing on adults, cardiac auscultation, validation of existing models, or lacking performance metrics. Risk of bias was assessed using a modified Quality Assessment of Diagnostic Accuracy Studies (version 2) framework. Data were extracted on study design, dataset, ML methods, feature extraction, and classification tasks. Bivariate meta-analysis was performed for binary classification tasks, including wheezing and abnormal lung sound detection. Results: A total of 41 studies met the inclusion criteria. The most common classification task was binary detection of abnormal lung sounds, particularly wheezing. Pooled sensitivity and specificity for wheeze detection were 0.902 (95% CI 0.726-0.970) and 0.955 (95% CI 0.762-0.993), respectively. For abnormal lung sound detection, pooled sensitivity was 0.907 (95% CI 0.816-0.956) and specificity 0.877 (95% CI 0.813-0.921). The most frequently used feature extraction methods were Mel-spectrogram, Mel-frequency cepstral coefficients, and short-time Fourier transform. Convolutional neural networks were the predominant ML model, often combined with recurrent neural networks or residual network architectures. However, high heterogeneity in dataset size, annotation methods, and evaluation criteria were observed. Most studies relied on small, single-center datasets, limiting generalizability. Conclusions: ML models show high accuracy in pediatric lung sound analysis, but face limitations due to dataset heterogeneity, lack of standard guidelines, and limited external validation. Future research should focus on standardized protocols and the development of large-scale, multicenter datasets to improve model robustness and clinical implementation.

1 September 2021 in Integrative Medicine Research
Verified
Journal Article
Open access
SPSa-Yoon Park
Sa-Yoon Park
MPMusun park
Musun park
WLWon-Yung Lee
Won-Yung Lee
CLChoong-Yeol Lee
Choong-Yeol Lee
JKJi-Hwan Kim
Ji-Hwan Kim
Chang-Eop KimChang-Eop Kim
Chang-Eop Kim
Despite the importance of accurate Sasang type diagnosis, a unique form of Korean medicine, there have been concerns about consistency among diagnoses. We investigate a data-driven integrative diagnostic model by applying machine learning to a multicenter clinical dataset with comprehensive features. Extremely randomized trees (ERT), support vector machines, multinomial logistic regression, and K-nearest neighbor were applied, and performances were evaluated by cross-validation. The feature importance of the classifier was analyzed to understand which information is crucial in diagnosis. The ERT classifier showed the highest performance, with an overall f1 score of 0.60 ± 0.060. The feature classes of body measurement, personality, general information, and cold–heat were more decisive than others in classifying Sasang types. Costal angle was the most informative feature. In pairwise classification, we found Sasang type-dependent distinctions that body measurement features played a key role in TE-SE and TE-SY datasets, while personality and cold–heat features showed importance in SE-SY dataset. Current study investigated a comprehensive diagnostic model for Sasang type using machine learning and achieved better performance than previous studies. This study helps data-driven decision making in clinics by revealing key features contributing to the Sasang type diagnosis.

7 July 2024 in Integrative Medicine Research
Verified
Journal Article
Open access
HBHyojin Bae
Hyojin Bae
SPSa-Yoon Park
Sa-Yoon Park
Chang-Eop KimChang-Eop Kim
Chang-Eop Kim
In this paper, we present a comprehensive guide for implementing artificial intelligence (AI) techniques in traditional East Asian medicine (TEAM) research. We cover essential aspects of the AI model development pipeline, including research objective establishment, data collection and preprocessing, model selection, evaluation, and interpretation. The unique considerations in applying AI to TEAM datasets, such as data scarcity, imbalance, and model interpretability, are discussed. We provide practical tips and recommendations based on best practices and our own experience. The potential of large language models in TEAM research is also highlighted. Finally, we discuss the challenges and future directions of AI application in TEAM, emphasizing the need for standardized data collection and sharing platforms.

25 April 2024 in Life
Verified
Journal Article
Open access
PDF file
SPSa-Yoon Park
Sa-Yoon Park
YLYoon Yeol Lee
Yoon Yeol Lee
MKMin Hee Kim
Min Hee Kim
Chang-Eop KimChang-Eop Kim
Chang-Eop Kim
Allergic rhinitis (AR) is a systemic allergic disease that has a considerable impact on patients’ quality of life. Current treatments include antihistamines and nasal steroids; however, their long-term use often causes undesirable side effects. In this context, traditional Asian medicine (TAM), with its multi-compound, multi-target herbal medicines (medicinal plants), offers a promising alternative. However, the complexity of these multi-compound traits poses challenges in understanding the overall mechanisms and efficacy of herbal medicines. Here, we demonstrate the efficacy and underlying mechanisms of these multi-compound herbal medicines specifically used for AR at a systemic level. We utilized a modified term frequency–inverse document frequency method to select AR-specific herbs and constructed an herb–compound–target network using reliable databases and computational methods, such as the Quantitative Estimate of Drug-likeness for compound filtering, STITCH database for compound-target interaction prediction (with a high confidence score threshold of 0.7), and DisGeNET and CTD databases for disease-gene association analysis. Through this network, we conducted AR-related targets and pathway analyses, as well as clustering analysis based on target-level information of the herbs. Gene ontology enrichment analysis was conducted using a protein–protein interaction network. Our research identified 14 AR-specific herbs and analyzed whether AR-specific herbs are highly related to previously known AR-related genes and pathways. AR-specific herbs were found to target several genes related to inflammation and AR pathogenesis, such as PTGS2, HRH1, and TBXA2R. Pathway analysis revealed that AR-specific herbs were associated with multiple AR-related pathways, including cytokine signaling, immune response, and allergic inflammation. Additionally, clustering analysis based on target similarity identified three distinct subgroups of AR-specific herbs, corroborated by a protein–protein interaction network. Group 1 herbs were associated with the regulation of inflammatory responses to antigenic stimuli, while Group 2 herbs were related to the detection of chemical stimuli involved in the sensory perception of bitter taste. Group 3 herbs were distinctly associated with antigen processing and presentation and NIK/NF-kappa B signaling. This study decodes the principles of TAM herbal configurations for AR using a network pharmacological approach, providing a holistic understanding of drug effects beyond specific pathways.