Anirban Siddhanta

Dr. Anirban Siddhanta


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2015 in Journal of Biological Chemistry
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Journal Article
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RCRajarshi Chakrabarti
Rajarshi Chakrabarti
Sulagna SanyalSulagna Sanyal
Sulagna Sanyal
AGAmit Ghosh
Amit Ghosh
KBKaushik Bhar
Kaushik Bhar
CDChandrima Das
Chandrima Das
ASAnirban Siddhanta
Anirban Siddhanta
Phosphoinositide signaling has been implicated in the regulation of numerous cellular processes including cytoskeletal dynamics, cellular motility, vesicle trafficking, and gene transcription. Studies have also shown that nuclear phosphoinositide(s) regulates processes such as mRNA export, cell cycle progression, gene transcription, and DNA repair. We have shown previously that the nuclear form of phosphatidylinositol-4-phosphate 5-kinase 1α (PIP5K), the enzyme responsible for phosphatidylinositol 4,5-bisphosphate synthesis, is modified by small ubiquitin-like modifier (SUMO)-1. In this study, we have shown that due to the site-specific Lys to Ala mutations of PIP5K at Lys-244 and Lys-490, it is unable to localize in the nucleus and nucleolus, respectively. Furthermore, by using chromatin immunoprecipitation assays, we have observed that PIP5K associates with the chromatin silencing complex constituted of H3K9me3 and heterochromatin protein 1α at multiple ribosomal DNA (rDNA) loci. These interactions followed a definite cyclical pattern of occupancy (mostly G1) and release from the rDNA loci (G1/S) throughout the cell cycle. Moreover, the immunoprecipitation results clearly demonstrate that PIP5K SUMOylated at Lys-490 interacts with components of the chromatin silencing machinery, H3K9me3 and heterochromatin protein 1α. However, PIP5K does not interact with the gene activation signature protein H3K4me3. This study, for the first time, demonstrates that PIP5K, an enzyme actively associated with lipid modification pathway, has additional roles in rDNA silencing.

31 December 2014 in Journal of Parasitology Research
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Journal Article
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SCSudipta Chakraborty
Sudipta Chakraborty
KBKaushik Bhar
Kaushik Bhar
SSSandip Saha
Sandip Saha
RCRajarshi Chakrabarti
Rajarshi Chakrabarti
APAnjali Pal
Anjali Pal
ASAnirban Siddhanta
Anirban Siddhanta
Visceral leishmaniasis, a vector-borne tropical disease that is threatening about 350 million people worldwide, is caused by the protozoan parasiteLeishmania donovani. Metalloids like arsenic and antimony have been used to treat diseases like leishmaniasis caused by the kinetoplastid parasites. Arsenic (III) at a relatively higher concentration (30 μg/mL) has been shown to have antileishmanial activity, but this concentration is reported to be toxic in several experimental mammalian systems. Nanosized metal (0) particles have been shown to be more effective than their higher oxidation state forms. There is no information so far regarding arsenic nanoparticles (As-NPs) as an antileishmanial agent. We have tested the antileishmanial properties of the As-NPs, developed for the first time in our laboratory. As-NPs inhibited thein vitrogrowth, oxygen consumption, infectivity, and intramacrophage proliferation ofL. donovaniparasites at a concentration which is about several fold lower than that of As (III). Moreover, this antileishmanial activity has comparatively less cytotoxic effect on the mouse macrophage cell line. It is evident from our findings that As-NPs have more potential than As (III) to be used as an antileishmanial agent.

14 April 2015 in The Protein Journal
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KBKaushik Bhar
Kaushik Bhar
AMAtanu Maity
Atanu Maity
AGAmit Ghosh
Amit Ghosh
TDTanusree Das
Tanusree Das
SDShubhra Ghosh Dastidar
Shubhra Ghosh Dastidar
ASAnirban Siddhanta
Anirban Siddhanta

1 January 2016 in Biochemistry Research International
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Journal Article
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DBDebajit Bhowmick
Debajit Bhowmick
KBKaushik Bhar
Kaushik Bhar
SMSanjaya K. Mallick
Sanjaya K. Mallick
SDSubhadip Das
Subhadip Das
NCNabanita Chatterjee
Nabanita Chatterjee
ASAnirban Siddhanta
Anirban Siddhanta
Melanoma is one of the most aggressive forms of cancer, usually resistant to standard chemotherapeutics. Despite a huge number of clinical trials, any success to find a chemotherapeutic agent that can effectively destroy melanoma is yet to be achieved. Para-phenylenediamine (p-PD) in the hair dyes is reported to purely serve as an external dyeing agent. Very little is known about whether p-PD has any effect on the melanin producing cells. We have demonstrated p-PD mediated apoptotic death of both human and mouse melanoma cellsin vitro. Mouse melanoma tumour growth was also arrested by the apoptotic activity of intraperitoneal administration of p-PD with almost no side effects. This apoptosis is shown to occur primarily via loss of mitochondrial membrane potential (MMP), generation of reactive oxygen species (ROS), and caspase 8 activation. p-PD mediated apoptosis was also confirmed by the increase in sub-G0/G1 cell number. Thus, our experimental observation suggests that p-PD can be a potential less expensive candidate to be developed as a chemotherapeutic agent for melanoma.

11 March 2019 in Journal of Plant Biochemistry and Biotechnology
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Journal Article
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AGAmit Ghosh
Amit Ghosh
KBKaushik Bhar
Kaushik Bhar
ASAnirban Siddhanta
Anirban Siddhanta

22 July 2022 in bioRxiv
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Preprint
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AGAmit Ghosh
Amit Ghosh
ADAniruddho Das
Aniruddho Das
AAAzimuddin Ashrafi
Azimuddin Ashrafi
SSSudeshna Saha
Sudeshna Saha
FMFiroz Molla
Firoz Molla
ASAnirban Siddhanta
Anirban Siddhanta
Nitrogenase that catalyses anaerobic symbiotic nitrogen fixation (SNF) in legumes is synthesized by rhizobium. Legume root cells express nodulin proteins after infection with rhizobia. Nodulins have been classified as early and late, reflecting the time points of their expression. Leghemoglobin (LegH), which is a classic example of a late nodulin, sequesters oxygen inside the nodule to protect the nitrogenase from oxygen toxicity to sustain SNF. Previous data from our laboratory demonstrated that phosphorylated LegH at S45 showed compromised oxygen sequestration in vitro due to structural disruption of the porphyrin binding pocket responsible for its oxygen binding. Moreover, we have demonstrated by using co-immunoprecipitation that LegH interacts both in vitro with Nodulin 16 of Lotus japonicus (Nlj16), another late nodulin. Fluorescence Immunohistochemistry (IHC) data shows that both LegH and Nlj16 are localized in the membrane and cytosol of infected cells. Notably, serine phosphorylation of LegH and interaction of Nlj16 with LegH respectively reduces and increases its in vitro oxygen sequestration ability. In this report, to further elucidate the spatio-temporal regulation of this interaction, we generated hairy root transgenic Lotus japonicus plants where Nlj16 has been knocked down by using siRNA. Most interestingly, our data shows that the membrane localization of LegH is obliterated in the Nlj16 knocked-down root cells infected with the cognate Rhizobia suggesting a distinct role of Nlj16 in its recruitment to the membrane of nodule cells.