Pouya Jamshidi

Dr. Pouya Jamshidi

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 March 2025 in Nature Medicine
Verified
Journal Article
Open access
PDF file
LOLynn van Olst
Lynn van Olst
BSBrooke Simonton
Brooke Simonton
AEAlex J. Edwards
Alex J. Edwards
AFAnne V. Forsyth
Anne V. Forsyth
JBJake Boles
Jake Boles
DGDavid Gate
David Gate
Alzheimer’s disease (AD) therapies utilizing amyloid-β (Aβ) immunization have shown potential in clinical trials. Yet, the mechanisms driving Aβ clearance in the immunized AD brain remain unclear. Here, we use spatial transcriptomics to explore the effects of both active and passive Aβ immunization in the AD brain. We compare actively immunized patients with AD with nonimmunized patients with AD and neurologically healthy controls, identifying distinct microglial states associated with Aβ clearance. Using high-resolution spatial transcriptomics alongside single-cell RNA sequencing, we delve deeper into the transcriptional pathways involved in Aβ removal after lecanemab treatment. We uncover spatially distinct microglial responses that vary by brain region. Our analysis reveals upregulation of the triggering receptor expressed on myeloid cells 2 (TREM2) and apolipoprotein E (APOE) in microglia across immunization approaches, which correlate positively with antibody responses and Aβ removal. Furthermore, we show that complement signaling in brain myeloid cells contributes to Aβ clearance after immunization. These findings provide new insights into the transcriptional mechanisms orchestrating Aβ removal and shed light on the role of microglia in immune-mediated Aβ clearance. Importantly, our work uncovers potential molecular targets that could enhance Aβ-targeted immunotherapies, offering new avenues for developing more effective therapeutic strategies to combat AD.

10 November 2024 in The American Journal of Pathology
Verified
Journal Article
Closed access
RCRudy J. Castellani
Rudy J. Castellani
PJPouya Jamshidi
Pouya Jamshidi
GPGermán Plascencia-Villa
Germán Plascencia-Villa
George PerryGeorge Perry
George Perry

29 May 2025 in JCI Insight
Verified
Journal Article
Open access
BHBarbara A. Hanson
Barbara A. Hanson
XDXin Dang
Xin Dang
PJPouya Jamshidi
Pouya Jamshidi
ASAlicia Steffens
Alicia Steffens
KCKaleigh Marie Copenhaver
Kaleigh Marie Copenhaver
IKIgor J. Koralnik
Igor J. Koralnik
Parkinson’s disease (PD) is a neurodegenerative disorder with both genetic and environmental factors contributing to pathogenesis. Viral infections are potential environmental triggers that influence PD pathology. Using ViroFind, an unbiased platform for whole virome sequencing, along with quantitative PCR (qPCR), we identified human pegivirus (HPgV) in 5 of 10 (50%) of PD brains, confirmed by IHC in 2 of 2 cases, suggesting an association with PD. All 14 age- and sex-matched controls were HPgV negative. HPgV-brain positive patients with PD showed increased neuropathology by Braak stage and Complexin-2 levels, while those positive in the blood had higher IGF-1 and lower pS65-ubiquitin, supporting disruption in metabolism or mitophagy in response to HPgV. RNA-Seq revealed altered immune signaling in HPgV-infected PD samples, including consistent suppression of IL-4 signaling in both the brain and blood. Longitudinal analysis of blood samples showed a genotype-dependent viral response, with HPgV titers correlating directly with IL-4 signaling in a LRRK2 genotype–dependent manner. YWHAB was a key hub gene in the LRRK2 genotypic response, which exhibited an altered relationship with immune-related factors, including NFKB1 , ITPR2 , and LRRK2 itself, in patients with PD who are positive for HPgV. These results suggest a role for HPgV in shaping PD pathology and highlight the complex interplay between viral infection, immunity, and neuropathogenesis.

27 June 2023 in Cancers
Verified
Journal Article
Open access
PDF file
KNKhizar Rehan Nandoliya
Khizar Rehan Nandoliya
NSNishanth Sadagopan
Nishanth Sadagopan
VTVineeth Thirunavu
Vineeth Thirunavu
EHEthan Houskamp
Ethan Houskamp
CKConstantine L. Karras
Constantine L. Karras
Stephen T. MagillStephen T. Magill
Stephen T. Magill
Most of the literature on pineoblastoma consists of case reports and single-institution series. The goal of this systematic review and individual patient data (IPD) analysis was to summarize the existing literature, identify factors associated with overall survival (OS), and provide a contemporary update on prognosis for patients with pineoblastoma. Forty-four studies were identified with 298 patients having IPD. Kaplan–Meier analyses were used to report survival outcomes based on age, tumor metastases, extent of resection (EOR), adjuvant therapy, and publication year. Cox regression was performed to identify independent predictors of time to mortality. Multivariable recursive partitioning analysis was used to identify the most important subgroups associated with mortality. Patients were classified based on publication year before and after the last systematic review on this topic (pre-2012 and 2012 onwards) and compared using univariate and multivariable analyses. This study demonstrates that EOR less-than-gross total resection, metastatic presentation, adjuvant chemotherapy without radiation, and tumor presentation in children less than three years old are associated with poorer prognosis. Since 2012, the 5-year actuarial OS has improved from 32.8% to 56.1%, which remained significant even after accounting for EOR, age, and adjuvant therapy. Pineoblastoma remains a severe rare disease, but survival outcomes are improving.

15 July 2025 in Journal of Pathology and Translational Medicine
Verified
Journal Article
Open access
RMRachel A. Multz
Rachel A. Multz
PJPouya Jamshidi
Pouya Jamshidi
JAJared Tyler Ahrendsen
Jared Tyler Ahrendsen
Multiple sclerosis (MS) is an immune-mediated demyelinating disorder of the central nervous system. It is a chronic disorder resulting in neurologic dysfunction that is disseminated both in time (multiple discrete episodes) and space (involving multiple sites). Histologically, MS is characterized by localized loss of myelin with relative preservation of axons. This review will discuss the epidemiology, clinical, laboratory, radiologic, and pathologic features of multiple sclerosis, as well as briefly touch on the differential diagnosis, treatment, and prognosis of the disease, especially as they relate to the pathologic interpretation of tissue specimens.

27 January 2025
Verified
Book Chapter
Open access
PDF file
PKPramath Kakodkar
Pramath Kakodkar
KCKyle Conway
Kyle Conway
Lucas Santana dos SantosLucas Santana dos Santos
Lucas Santana dos Santos
MMMatthew R. McCord
Matthew R. McCord
MSMadina Sukhanova
Madina Sukhanova
PJPouya Jamshidi
Pouya Jamshidi
The classification, grading, and risk stratification of central nervous system (CNS) tumors have rapidly evolved with the advent of integrative advanced molecular testing. Here, we review the advances and challenges associated with DNA methylation-based classification of central nervous system (CNS) tumors. Specifically, we will review the brief background information about the role of epigenetic signatures, including DNA methylation status of CpG islands, in identifying the cell of origin, bioinformatic methods, and products of DNA methylation profiling, namely t-distributed stochastic neighbor embedding (t-SNE) plot vs. uniform manifold approximation and projection (UMAP), CNS tumor classifications, methylguanine methyltransferase (MGMT), and chromosomal copy number variations. We will follow with the diagnostic utility, accuracy, and impact on clinical outcomes. We will conclude the chapter by highlighting the limitations of DNA methylation, bioethical issues, and the future directions for this diagnostic tool.