Branko Sikoparija

Dr. Branko Sikoparija

1. Research Institute for Information Technologies in Biosystems, BioSensе Institute, Novi Sad, Serbia
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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 November 2019 in Aerosol Science and Technology
Verified
Journal Article
Open access
Tina Santl-TemkivTina Santl-Temkiv
Tina Santl-Temkiv
Branko SikoparijaBranko Sikoparija
Branko Sikoparija
Teruya MakiTeruya Maki
Teruya Maki
Federico CarotenutoFederico Carotenuto
Federico Carotenuto
Pierre AmatoPierre Amato
Pierre Amato
JHJ. Alex Huffman
J. Alex Huffman
Outdoor field measurements of bioaerosols are performed within a wide range of basic and applied scientific disciplines, each with its own goals, assumptions, and terminology. This paper contains brief reviews of outdoor field bioaerosol research from these diverse interests, with emphasis on perspectives from the atmospheric sciences. The focus is on a high level discussion of pressing scientific questions, grand challenges, and needs for cross-disciplinary collaboration. The research topics, in which bioaerosol field measurement are important, include (i) atmospheric physics, clouds, climate, and hydrological cycle; (ii) atmospheric chemistry; (iii) airborne allergen-containing particles; (iv) airborne human pathogens and national security; (v) airborne livestock and crop pathogens; and (vi) biogeography and biodiversity. We concisely review bioaerosol impacts and discuss properties that distinguish bioaerosols from abiological aerosols. We give extra focus to regions of specific interest, i.e. forests, polar regions, marine and coastal environments, deserts, urban and rural areas, and summarize key considerations related to bioaerosol measurements, such as of fluxes, long-range transport, and from both stationary and vessel-driven platforms. Keeping in mind a series of key scientific questions posed within the diverse communities, we suggest that pressing scientific questions include: (i) emission sources and flux estimates; (ii) spatial distribution; (iii) changes in distribution; (iv) atmospheric aging; (v) metabolic activity; (vi) urbanization of allergies; (vii) transport of human pathogens; and (viii) climate-relevant properties.

27 December 2022 in Science of The Total Environment
Verified
Journal Article
Open access
José María Maya-ManzanoJosé María Maya-Manzano
José María Maya-Manzano
FTFiona Tummon
Fiona Tummon
RAReto Abt
Reto Abt
NANathan Allan
Nathan Allan
LBLandon Bunderson
Landon Bunderson
JBJeroen Buters
Jeroen Buters
To benefit allergy patients and the medical practitioners, pollen information should be available in both a reliable and timely manner; the latter is only recently possible due to automatic monitoring. To evaluate the performance of all currently available automatic instruments, an international intercomparison campaign was jointly organised by the EUMETNET AutoPollen Programme and the ADOPT COST Action in Munich, Germany (March-July 2021). The automatic systems (hardware plus identification algorithms) were compared with manual Hirst-type traps. Measurements were aggregated into 3-hourly or daily values to allow comparison across all devices. We report results for total pollen as well as for Betula, Fraxinus, Poaceae, and Quercus, for all instruments that provided these data. The results for daily averages compared better with Hirst observations than the 3-hourly values. For total pollen, there was a considerable spread among systems, with some reaching R2 > 0.6 (3 h) and R2 > 0.75 (daily) compared with Hirst-type traps, whilst other systems were not suitable to sample total pollen efficiently (R2 < 0.3). For individual pollen types, results similar to the Hirst were frequently shown by a small group of systems. For Betula, almost all systems performed well (R2 > 0.75 for 9 systems for 3-hourly data). Results for Fraxinus and Quercus were not as good for most systems, while for Poaceae (with some exceptions), the performance was weakest. For all pollen types and for most measurement systems, false positive classifications were observed outside of the main pollen season. Different algorithms applied to the same device also showed different results, highlighting the importance of this aspect of the measurement system. Overall, given the 30 % error on daily concentrations that is currently accepted for Hirst-type traps, several automatic systems are currently capable of being used operationally to provide real-time observations at high temporal resolutions. They provide distinct advantages compared to the manual Hirst-type measurements.

30 July 2022 in Aerobiologia
Verified
Journal Article
Open access
PDF file
JBJeroen Buters
Jeroen Buters
BCBernard Clot
Bernard Clot
Carmen GalanCarmen Galan
Carmen Galan
RGRegula Gehrig
Regula Gehrig
SGStefan Gilge
Stefan Gilge
BSBarbara Stjepanovic
Barbara Stjepanovic
Pollen monitoring has traditionally been carried out using manual methods first developed in the early 1950s. Although this technique has been recently standardised, it suffers from several drawbacks, notably data usually only being available with a delay of 3–9 days and usually delivered at a daily resolution. Several automatic instruments have come on to the market over the past few years, with more new devices also under development. This paper provides a comprehensive overview of all available and developing automatic instruments, how they measure, how they identify airborne pollen, what impacts measurement quality, as well as what potential there is for further advancement in the field of bioaerosol monitoring.

1 February 2014 in Atmospheric Environment
Verified
Journal Article
Closed access
MTMichel Thibaudon
Michel Thibaudon
Branko SikoparijaBranko Sikoparija
Branko Sikoparija
GOGilles Oliver
Gilles Oliver
Matt SmithMatt Smith
Matt Smith
CSCarsten Skjoth
Carsten Skjoth

8 December 2021 in Atmospheric Measurement Techniques
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Journal Article
Open access
PDF file
GLGian Lieberherr
Gian Lieberherr
KAKevin Auderset
Kevin Auderset
BCBertrand Calpini
Bertrand Calpini
BCBernard Clot
Bernard Clot
BCBenoît Crouzy
Benoît Crouzy
KVKonstantina Vasilatou
Konstantina Vasilatou
This study presents the first reference calibrations of three commercially available bioaerosol detectors. The Droplet Measurement Technologies WIBS-NEO (new version of the wideband integrated bioaerosol spectrometer), Plair Rapid-E, and Swisens Poleno were compared with a primary standard for particle number concentrations at the Federal Institute for Metrology (METAS). Polystyrene (PSL) spheres were used to assess absolute particle counts for diameters from 0.5 to 10 µm. For the three devices, counting efficiency was found to be strongly dependent on particle size. The results confirm the expected detection range for which the instruments were designed. While the WIBS-NEO achieves its highest efficiency with smaller particles, e.g. 90 % for 0.9 µm diameter, the Plair Rapid-E performs best for larger particles, with an efficiency of 58 % for particles with a diameter of 10 µm. The Swisens Poleno is also designed for larger particles but operates well from 2 µm. However, the exact counting efficiency of the Poleno could not be evaluated as the cut-off diameter range of the integrated concentrator unit was not completely covered. In further experiments, three different types of fluorescent particles were tested to investigate the fluorescent detection capabilities of the Plair Rapid-E and the Swisens Poleno. Both instruments showed good agreement with the reference data. While the challenge to produce known concentrations of larger particles above 10 µm or even fresh pollen particles remains, the approach presented in this paper provides a potential standardised validation method that can be used to assess counting efficiency and fluorescence measurements of automatic bioaerosol monitoring devices.

26 November 2019 in Biomolecules
Verified
Journal Article
Open access
PDF file
MMMirjana Mosić
Mirjana Mosić
JTJelena Trifković
Jelena Trifković
IVIrena Vovk
Irena Vovk
Uroš M GašićUroš M Gašić
Uroš M Gašić
Živoslav Lj TešićŽivoslav Lj Tešić
Živoslav Lj Tešić
DMDušanka Milojković-Opsenica
Dušanka Milojković-Opsenica
Information on compositional, nutritional and functional properties of bee-pollen, as a health-promoting food, is essential for defining its quality. Concerning the nutritional importance of phenolic compounds, the aim of this study was to determine the phenolic profile and antioxidant activity of twenty-four bee-pollen samples collected from different regions of Serbia. High-performance thin-layer chromatographic (HPTLC) fingerprinting was used for profiling of bee-pollen samples according to the botanical type. HPTLC hyphenated with image analysis and a pattern recognition technique confirmed the grouping of samples caused by the specific phenolic composition of pollens of different botanical origin. Flavonoid glycosides in bee-pollen samples were identified by applying ultra-high-performance liquid chromatography (UHPLC) coupled with linear ion trap-Orbitrap mass spectrometry (LTQ Orbitrap MS). Eight out of twenty-seven flavonol glycosides were identified in bee-pollen samples for the first time. All analyzed bee-pollen samples showed a high number of phenolic compounds which may have therapeutic potential.