A refined version of the ‘‘shape consistent’’ effective potential procedure of Christiansen, Lee, and Pitzer was used to compute averaged relativistic effective potentials (AREP) and spin-orbit operators for the atoms K through Kr. Particular attention was given to the partitioning of the core and valence space, and where appropriate more than one set of potentials is provided. These are tabulated in analytic form. Gaussian basis sets with expansion coefficients for the lowest energy state of each atom are given. The reliability of the transition metal AREPs was determined by comparing computed atomic excitation energies with accurate all-electron relativistic values. In all cases the maximum error was found to be less than 0.1 eV. The reliability of the spin-orbit operators was also considered.

Arabidopsis thaliana S-Phase Kinase-Associated Protein 2A (SKP2A) is an F-box protein that regulates the proteolysis of cell cycle transcription factors. The plant hormone auxin regulates multiple aspects of plant growth and development, including cell division. We found that auxin induces the ubiquitin-dependent degradation of SKP2A both in vivo and in vitro, suggesting that this hormone acts as a signal to trigger SKP2A proteolysis. In this article, we show that auxin binds directly and specifically to SKP2A. By TIR1-based superposition and docking analyzes, we identified an auxin binding site in SKP2A. Mutations in this binding site reduce the ability of SKP2A to bind to auxin and generate nondegradable SKP2A forms. In addition, these non-auxin binding proteins are unable to promote E2FC/DPB degradation in vivo or to induce cell division in the root meristem. Auxin binds to TIR1 to promote its interaction with the auxin/indole-3-acetic acid target proteins. Here, we show that auxin also enhanced the interaction between SKP2A and DPB. Finally, a mutation in SKP2A leads to auxin-resistant root growth, an effect that is additive with the tir1-1 phenotype. Thus, our data indicate that SKP2A is an auxin binding protein that connects auxin signaling with cell division.

The variation with the intermolecular distance of geometries, energies, and other properties dependent on the electron density ρ(r) are studied in three cyclic dimers linked by two hydrogen bonds: formic acid and formamide homodimers and the heterodimer formamide/formic acid complex. Topological features, energy densities and integrated atomic properties provided by AIM theory are calculated with ρ(r) obtained at $\mathrm{B3LYP}\text{/6-311++}\mathrm{G}\mathrm{(d,p)}$ optimized geometries for a number of intermonomer distances covering large separations, equilibrium, and short distances. The variation with these distances of properties studied allows to characterize the nature of the interaction in A–H⋯B (A=N, O and B=O) hydrogen bonds. Whereas at large distances the attraction is purely electrostatic, quantum effects associated with redistributions of $\mathrm{\rho (}{r})$ mainly around H and B atoms dominate the interaction in the neighborhood of equilibrium. Mutual penetration of the electron densities of these atoms leads to considerable reductions of their atomic volumes and associated polarization effects as well as energetic stabilization of atom A. Although the interaction in this range of intermonomer separations displays noncovalent features, when the dimers move at distances shorter than equilibrium, characteristics typical of covalent interactions begin to appear while the systems leave the planar structures presented until then. This work complements our previous study [O. Galvez, P. C. Gomez, and L. F. Pacios, J. Chem. Phys. 115, 11166 (2001)] of dimers with one single hydrogen bond.