Department of Spatial Sciences, Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcka 129, 165 00 Praha Suchdol, Czech Republic
Prof. Dr. Marco Malavasi
Department of Spatial Sciences, Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcka 129, 165 00 Praha Suchdol, Czech Republic
Aim: The spectral variability hypothesis (SVH) suggests a link between spectral variation and plant biodiversity. The underlying assumptions are that higher spectral variation in canopy reflectance (depending on scale) is caused by either (1) variation in habitats or linked vegetation types or plant communities with their specific optical community traits or (2) variation in the species themselves and their specific optical traits.Methods: The SVH was examined in several empirical remote‐sensing case studies, which often report some correlation between spectral variation and biodiversity‐related variables (mostly plant species counts); however, the strength of the observed correlations varies between studies. In contrast, studies focussing on understanding the causal relationship between (plant) species counts and spectral variation remain scarce. Here, we discuss these causal relationships and support our perspectives through simulations and experimental data.Results: We reveal that in many situations the spectral variation caused by species or functional traits is subtle in comparison to other factors such as seasonality and physiological status. Moreover, the degree of contrast in reflectance has little to do with the number but rather with the identity of the species or communities involved. Hence, spectral variability should not be expressed based on contrast but rather based on metrics expressing manifoldness. While we describe cases where a certain link between spectral variation and plant species diversity can be expected, we believe that as a scientific hypothesis (which suggests a general validity of this assumed relationship) the SVH is flawed and requires refinement.Conclusions: To this end we call for more research examining the drivers of spectral variation in vegetation canopies and their link to plant species diversity and biodiversity in general. Such research will allow critically assessing under which conditions spectral variation is a useful indicator for biodiversity monitoring and how it could be integrated into monitoring networks.
Species distribution models (SDMs) have proven valuable in filling gaps in our knowledge of species occurrences. However, despite their broad applicability, SDMs exhibit critical shortcomings due to limitations in species occurrence data. These limitations include, in particular, issues related to sample size, positional uncertainty, and sampling bias. In addition, it is widely recognised that the quality of SDMs as well as the approaches used to mitigate the impact of the aforementioned data limitations depend on species ecology. While numerous studies have evaluated the effects of these data limitations on SDM performance, a synthesis of their results is lacking. However, without a comprehensive understanding of their individual and combined effects, our ability to predict the influence of these issues on the quality of modelled species–environment associations remains largely uncertain, limiting the value of model outputs. In this paper, we review studies that have evaluated the effects of sample size, positional uncertainty, sampling bias, and species ecology on SDMs outputs. We build upon their findings to provide recommendations for the critical assessment of species data intended for use in SDMs.
1 November 2016 in Estuarine, Coastal and Shelf Science
We analyze the spatial patterns of natural dune cover patches and their plant richness, comparing coastal sites with different levels of human pressure in central Italy. We created a detailed land cover map of dune sites. The spatial pattern of natural dune cover types was characterized by computing a set of patch-based metrics. To quantify patch plant richness, we used 16 m2 vegetation plots, randomly distributed on coastal dune cover types. For each patch, the richness of the entire pool of species and of three guilds (i.e., typical dune, ruderal, and alien species) was considered. We compared different levels of human pressure on coastal dunes focusing on pattern metrics and floristic information by using the nonparametric Kruskal–Wallis test. In sites with high human pressure, we have observed a general simplification in the natural dune spatial pattern and a decline of plant richness but with a specific response for each cover type. Alien and ruderal species presented low richness in all patches. In coastal dunes, the harsh ecological conditions and the strong sea–inland gradient shape the distribution of human activities and control the number of ruderal species. The approach effectively describes fragmentation and biodiversity in dune ecosystems.
27 February 2021 in Methods in Ecology and Evolution
Ecosystem heterogeneity has been widely recognized as a key ecological indicator of several ecological functions, diversity patterns and change, metapopulation dynamics, population connectivity or gene flow. In this paper, we present a new R package— rasterdiv —to calculate heterogeneity indices based on remotely sensed data. We also provide an ecological application at the landscape scale and demonstrate its power in revealing potentially hidden heterogeneity patterns. The rasterdiv package allows calculating multiple indices, robustly rooted in Information Theory, and based on reproducible open‐source algorithms.