Jan Pacina

Dr. Jan Pacina

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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2013 in International Journal of Geographical Information Science
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JMJozef Minár
Jozef Minár
MJMarián Jenčo
Marián Jenčo
IEIan S. Evans
Ian S. Evans
MKMartin Kadlec
Martin Kadlec
JKJozef Krcho
Jozef Krcho
ABAlexandra Benová
Alexandra Benová
Third-order geomorphometric variables (based on third derivatives of the altitudinal field) have been neglected in geomorphometry, but their application to the delimitation of surface objects will lead to their increasing significance in future. New techniques of computation, presented and evaluated here, facilitate their use. This paper summarizes recent knowledge concerning definition, computation and geomorphologic interpretation of these variables. Formulae defining various third-order variables are unified based on the physical definition of slope gradient. Methods for their computation are compared from the point of view of method error and error generated by digital elevation model (DEM) inaccuracy. For exact mathematical test surfaces, the most natural and simple variant of the method of central differences (CD2) shows a method error 2–3 times smaller than the other methods used recently in geomorphometry. However, success in coping with DEM inaccuracy depends (for a given grid mesh) on the number and weighting of points from which the derivative is computed. This was tested for surfaces with varying degrees of random error. Here least squares-based methods are the most effective for mixed derivatives (especially for finer grids and less accurate DEMs), while a variant of the CD method, that repeats numerical evaluation of first derivatives (CD1), is the most successful for derivatives in cardinal directions. The CD2 method is generally the most successful for coarser grids where the method error is dominant. Utilization of third-order variables is documented from examples of terrain feature (ridge, valley and edge) extraction and from a first statistical test of the hypothesis that real segments of the land surface have a tendency to a constant value of some morphometric variable. For detection of (sharp) ridges and valleys, it is shown that the rate of change of tangential curvature is inadequate: rate of change of normal curvature is also required. A basic confirmation of the constant-value tendency is provided.

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MDMartin Dolejš
Martin Dolejš
JPJan Pacina
Jan Pacina
MVMartin Veselý
Martin Veselý
DBDominik Brétt
Dominik Brétt
Places of past conflicts and persistent objects that reflect such events often attract the attention of archaeological prospection which facilitates the construction of conflict narratives. Field prospection as a precise method for localization of aerial bombing craters (as an example of such persistent features) is a highly time- and resource-consuming task. Therefore, methods for automatic identification of such features are evolving. We present a comparison of three methods for possible automatic crater detection based on (a) extraterrestrial crater detection algorithms, (b) geomorphology-based edge extraction, and (c) image pattern recognition via a state-of-the-art convolutional neural network (CNN). All methods were preliminarily tested on a case study of eight Second World War (WWII) aerial bombing crater sites in NW Czechia via Airborne Laser Scanned LiDAR-derived digital terrain models with different spatial resolutions. We found that extraterrestrial crater detection algorithms and geomorphology-based edge extraction methods yield worse results given the standard indices of precision and recall. By comparison, the CNN method utilized for a particular task achieved satisfying results, predominantly with 0.5 m/px resolution (which is often available at the country level) of the input raster. Nevertheless, overall performance with this resolution varies significantly among the sites. Therefore, the quality and readability of the input data are crucial factors for the successful acquisition of precise ordinance location identification.

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JPJan Pacina
Jan Pacina
ZLZuzana Lenďáková
Zuzana Lenďáková
JSJiri Stojdl
Jiri Stojdl
TGTomáš Matys Grygar
Tomáš Matys Grygar
MDMartin Dolejš
Martin Dolejš
A wide variety of geographic information system tools and methods was used for pre-dam topography reconstruction and reservoir bottom surveying in two dam reservoirs in the Ohře River, Czech Republic. The pre-dam topography was reconstructed based on archival aerial imagery and old maps. The benefits and drawbacks of these methods were tested and explained with emphasis on the fact that not all processed archival data are suitable for pre-dam topography modeling. Bathymetric surveying of a reservoir bottom is presently routine, but in this study, we used a wide combination of bathymetric mapping methods (sonar, ground penetration radar, and sub-bottom profiler) and topographic survey tools (LiDAR and photogrammetry), bringing great benefits for bottom dynamic analysis and data cross-validation. The data that we gathered made it possible to evaluate the formation of the inflow deltas in the reservoirs studied and assess the sediment reworking during recent seasonal drawdowns. A typical inflow delta was formed in the deeper of the two studied reservoirs, while the summer 2019 drawdown caused the formation and incision of a temporary drawdown channel and erosive downstream transport of approximately 1/10 of the delta body thickness in approximately 1/10 of the delta transverse size. No inflow delta was formed in the shallower of the studied reservoirs, but unexpectedly extensive sediment reworking was observed in the inflow part of the reservoir. Both the studied reservoirs and the pre-dam river floodplain have accumulated historical contamination by risk elements such as As, Hg, Pb; thus, the enhanced erosion of existing sediment bodies expected in the future, owing to more frequent droughts and global climate change, will endanger the ecological quality of the water and solids outflowing from the reservoirs.

2 February 2018 in Sustainability
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JKJaroslav Kukla
Jaroslav Kukla
MHMichal Holec
Michal Holec
JTJosef Trögl
Josef Trögl
DHDiana Holcová
Diana Holcová
DHDagmar Hofmanová
Dagmar Hofmanová
RHRoman Honzík
Roman Honzík
In the Protected Landscape Area “Labské pískovce” (Czech Republic), there are many sandstone caves accessible by permission only and where climbing equipment is commonly required. The tradition of visiting the caves dates back to turn of the 19th and 20th centuries, and visitors traditionally record their visits in log-books. We have gathered attendance data from 12 caves from log-books and via survey (2-year form collection period). The attendance varied from less than 10 to ~650 visitors annually. Signs of inadequate behavior of visitors were observed, especially waste disposal and smoking in the caves. Sediment step-compression increased significantly the ratios of fungi/bacteria and gram-positive to gram-negative (G+/G−) phospholipid fatty acids (PLFA) as well as PLFA of actinobacteria and activities of sediment phosphatases, glucosidases, and peroxidases. The number of visitors was correlated positively with the G+/G− ratio and sediment nutrients but negatively with sediment moisture and the activity of peroxidases. The results indicate a significant effect of attendance on sediment microbial communities, most likely caused by the import of nutrients into caves. Hence, reconsideration of the cave attendance policy is recommended.

7 March 2019 in Water
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JČJiří Čmelík
Jiří Čmelík
TBTaťjána Brovdyová
Taťjána Brovdyová
JTJosef Trögl
Josef Trögl
MNMartin Neruda
Martin Neruda
MKMatěj Kadlečík
Matěj Kadlečík
ASAlexander S. Sirotkin
Alexander S. Sirotkin
This article presents the development of selected heavy metals contained in river sediments at selected sites along the Bílina River. It describes the situation before the large flood in 2013, the situation just after that flood, the situation approximately 1 year after the flood, and 4 years after the flood. The contents of selected heavy metals from industrial pollution originating from transport and industry located along the river flow were monitored. Since the situation in the river before the flood was also known, it was possible to assess the impact of the 2013 flood on the distribution of heavy metals in the settled sediments. The results obtained show that the heavy metal content has changed significantly. During the flood in 2013 there was an increase in the concentration of almost all the monitored elements compared to the situation before the flood and one year after the flood. This could be caused by the churning of sediments as a result of the flood. The only exception was Cd, the concentration of which did not change significantly. However, Cd is present in the sediment samples at a low concentration at the limit of quantification (LOQ), so the change may not be noticeable. In 2017, four years after the flood, an increase in the concentration of all the monitored elements was found. The highest increase in the content of the monitored elements was observed at the sites with the highest industrial pollution. Following the flood in 2014, there was a situation where no significant differences were observed in the content of metals at the individual sampling points in contrast to the values obtained in 2012, 2013, and 2017. As a result of sediment churning and re-settlement during and after the flood, the sediment became homogenized along the entire river flow. After a longer period of time that was not accompanied by floods, a significant increase in the heavy metal concentration was observed due to anthropogenic pollution. The results show that the effect of flooding is only temporal and that anthropogenic pollution is more important than the impact of floods.

31 December 2023 in Stavební obzor - Civil Engineering Journal
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Karel PavelkaKarel Pavelka
Karel Pavelka
JPJan Pacina
Jan Pacina
This paper explores the historical evolution and contemporary applications of photogrammetry and laser scanning in cultural heritage preservation, focusing on the restoration of the Shush synagogue in Iraqi Kurdistan. It traces the development of documentation techniques, highlighting photogrammetry's pivotal role and the impact of the digital revolution. The case study of Project Shush illustrates the practical use of geomatics techniques, advanced 3D modeling, and collaboration with NGOs and authorities. The methodology outlines the use of technologies like terrestrial laser scanners (BLK360, Zeb-Revo) and UAVs, emphasizing their mobility and accuracy. Results detail the project stages, showcasing the creation of a detailed 3D model and the use of Unreal Engine for visualization. The conclusion emphasizes the importance of 3D documentation in cultural heritage and celebrates the success of the Shush synagogue restoration as a testament to technological advancements in preservation. Our research has shown that the joining of different 3D object documentation technologies significantly improves the quality and speeds up the workflow. Comparison of partial point clouds in software Cloudcompare on a case study of a smaller historic building showed differences in the internal structure in centimeters, while for the external parts that were covered with vegetation the differences reached up to decimeters.