Song Yi Koo

Dr. Song Yi Koo

Natural Product Informatics Research Center, KIST Gangneung Institute of Natural Products, Korea Institute of Science and Technology (KIST), 679 Saimdang-ro, Gangneung, Gangwon-do 25451, Republic of Korea

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 May 2019 in Marine Drugs
Verified
Journal Article
Open access
PDF file
SKSong Yi Koo
Song Yi Koo
JHJi-Hyun Hwang
Ji-Hyun Hwang
SYSeung-Hoon Yang
Seung-Hoon Yang
JUJae-In Um
Jae-In Um
KHKwang Won Hong
Kwang Won Hong
Sang Min KimSang Min Kim
Sang Min Kim
Fucoxanthin (FX), a marine carotenoid found in macroalgae and microalgae, exhibits several beneficial effects to health. The anti-obesity activity of FX is well documented, but FX has not been mass-produced or applied extensively or commercially because of limited availability of raw materials and complex extraction techniques. In this study, we investigated the anti-obesity effect of standardized FX powder (Phaeodactylum extract (PE)) developed from microalga Phaeodactylum tricornutum as a commercial functional food. The effects of PE on adipogenesis inhibition in 3T3-L1 adipocytes and anti-obesity in high-fat diet (HFD)-fed C57BL/6J mice were evaluated. PE and FX dose-dependently decreased intracellular lipid contents in adipocytes without cytotoxicity. In HFD-fed obese mice, PE supplementation for six weeks decreased body weight, organ weight, and adipocyte size. In the serum parameter analysis, the PE-treated groups showed attenuation of lipid metabolism dysfunction and liver damage induced by HFD. In the liver, uncoupling protein-1 (UCP1) upregulation and peroxisome proliferator activated receptor γ (PPARγ) downregulation were detected in the PE-treated groups. Additionally, micro computed tomography revealed lower fat accumulation in PE-treated groups compared to that in the HFD group. These results indicate that PE exerts anti-obesity effects by inhibiting adipocytic lipogenesis, inducing fat mass reduction and decreasing intracellular lipid content, adipocyte size, and adipose weight.

21 September 2022 in Food Chemistry
Verified
Journal Article
Open access
SKSong Yi Koo
Song Yi Koo
KHKeum Taek Hwang
Keum Taek Hwang
SHSoonjae Hwang
Soonjae Hwang
Ki Young ChoiKi Young Choi
Ki Young Choi
YPYun JI Park
Yun JI Park
Sang Min KimSang Min Kim
Sang Min Kim
The marine carotenoid fucoxanthin (FX) has various health benefits but suffers from poor bioavailability. We hypothesize that the bioavailability of FX in microalga Phaeodactylum tricornutum extract (PE) could be improved through nanoencapsulation. Here, we developed two types of nanoparticles: one consisting of alginate and casein (A-C-PE, 246 nm diameter, 79.6% encapsulation efficiency) and the other A-C-PE coated with chitosan (CS-A-C-PE, 258 nm, 78.1%). Both types of nanoparticles incorporating PE showed controlled FX release during simulated gastrointestinal digestion, as well as 1.8-fold improvement of membrane permeability in Caco-2/TC7 cells compared to non-encapsulated PE. Pharmacokinetic behavior of two FX metabolites (fucoxanthinol and amarouciaxanthin A) in mouse plasma was monitored after oral administration. The results showed that 31.8-332.1% more FX metabolites from the nanoparticles were absorbed into plasma than those from PE. In conclusion, encapsulation of PE in both types of nanoparticles significantly promoted the bioavailability of FX.

8 September 2022 in Agronomy
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Journal Article
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YPYun JI Park
Yun JI Park
JPJai-Eok Park
Jai-Eok Park
QTQuyen To Truong
Quyen To Truong
SKSong Yi Koo
Song Yi Koo
JCJae-Hyeong Choi
Jae-Hyeong Choi
Sang Min KimSang Min Kim
Sang Min Kim
Kale is a prominent leafy vegetable because of its high content of bioactive compounds and various health benefits. Microalgae have been suggested as a biostimulator that can replace chemical fertilizers by enhancing crop yield and supporting soil carbon sequestration. In this study, the effect of Chlorella vulgaris as a plant biostimulant on the growth and secondary metabolite contents of “Red Russian” kale (Brassica napus var. Pabularia) with green leaves and purple veins has been demonstrated. Three Chlorella treatments were used: CS, C. vulgaris suspension; CB, C. vulgaris biomass; and CFS, filtered C. vulgaris-free supernatant. The plant growth rates, phytochemical contents, and individual glucosinolate and anthocyanin contents were determined. There was no significant difference under the CS and CB treatments, while CFS negatively influenced on kale growth with 37% reduction of dried weight. In contrast, metabolite production differed according to Chlorella treatments. Total contents of chlorophyll and carotenoid were increased by 1.57 and 1.41 folds by CS treatment, whereas total contents of phenol and flavonoids were enhanced by 1.30 and 1.22 folds by CFS treatment. Totally, seven glucosinolates and four anthocyanins were characterized and quantified individually. Notably, CFS treatment increased gluconasturtiin and all anthocyanins the most, 10.28-fold and 5.90-fold, respectively.

18 February 2024 in Marine Drugs
Verified
Journal Article
Open access
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QTQuyen To Truong
Quyen To Truong
YPYun JI Park
Yun JI Park
JWJessica Winarto
Jessica Winarto
PHPhuong Kim Huynh
Phuong Kim Huynh
JMJinyoung Moon
Jinyoung Moon
Sang Min KimSang Min Kim
Sang Min Kim
This study aimed to investigate the regulation of fucoxanthin (FX) biosynthesis under various nitrogen conditions to optimize FX productivity in Phaeodactylum tricornutum. Apart from light, nitrogen availability significantly affects the FX production of microalgae; however, the underlying mechanism remains unclear. In batch culture, P. tricornutum was cultivated with normal (NN, 0.882 mM sodium nitrate), limited (LN, 0.22 mM), and high (HN, 8.82 mM) initial nitrogen concentrations in f/2 medium. Microalgal growth and photosynthetic pigment production were examined, and day 5 samples were subjected to fucoxanthin–chlorophyll a/c-binding protein (FCP) proteomic and transcriptomic analyses. The result demonstrated that HN promoted FX productivity by extending the exponential growth phase for higher biomass and FX accumulation stage (P1), showing a continuous increase in FX accumulation on day 6. Augmented FX biosynthesis via the upregulation of carotenogenesis could be primarily attributed to enhanced FCP formation in the thylakoid membrane. Key proteins, such as LHC3/4, LHCF8, LHCF5, and LHCF10, and key genes, such as PtPSY, PtPDS, and PtVDE, were upregulated under nitrogen repletion. Finally, the combination of low light and HN prolonged the P1 stage to day 10, resulting in maximal FX productivity to 9.82 ± 0.56 mg/L/day, demonstrating an effective strategy for enhancing FX production in microalgae cultivation.


23 December 2024 in Toxics
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IMINTAN RIZKI MAULIASARI
INTAN RIZKI MAULIASARI
HLHee Ju Lee
Hee Ju Lee
SKSong Yi Koo
Song Yi Koo
EHEmmanuel Hitayezu
Emmanuel Hitayezu
AKAnh Nguyen Thi Kieu
Anh Nguyen Thi Kieu
KCKwang Hyun Cha
Kwang Hyun Cha
This review delves into the impact of benzo(a)pyrene (B(a)P), which is a toxic and pervasive polycyclic aromatic hydrocarbon (PAH) and known carcinogen, on the human health risk from a gut microbiome perspective. We retrieved the relevant articles on each PAH and summarized the reporting to date, with a particular focus on benzo(a)pyrene, which has been reported to have a high risk of gut microbiome-related harm. B(a)P exposure can compromise the homeostasis of the gut microbiota, leading to dysbiosis, a state of microbial imbalance. The consequences of B(a)P-induced gut dysbiosis can be far-reaching, potentially contributing to inflammation, metabolic disorders, and an increased risk of various diseases. Additionally, due to the strong coupling between B(a)P and microparticles, the toxicity of B(a)P may be further compounded by its reaction with strong gut disruptors such as micro-/nanoplastics, which have recently become a serious environmental concern. This review summarizes current research on the impact of B(a)P on the gut microbiome, highlighting the intricate relationship between environmental exposure, gut health, and human disease. Further research is necessary to elucidate the underlying mechanisms and develop effective strategies to mitigate the adverse health effects of B(a)P exposure.