The present study aims to investigate a new fractional model describing the dynamical behaviour of the tuberculosis infection. In this new formulation, we use a recently introduced fractional operator with Mittag–Leffler nonsingular kernel. To solve and simulate the proposed model, a new and efficient numerical method is developed based on the product-integration rule. Simulation results are provided and some discussions are given to verify the theoretical analysis. The results indicate that employing the nonsingular operator can extract the hidden aspects of the model under consideration while these features are invisible when we use the ordinary time-derivatives. Therefore, the non-integer calculus supplies more flexible models describing the asymptotic behaviours of the real-world phenomena and helps us to better understand their complex dynamics.
B-cell epitopes have the capability to recognize and attach to the surface of antigen receptors to stimulate the immune system against pathogens. Identification of B-cell epitopes from antigens has a great significance in several biomedical and biotechnological applications, provides support in the development of therapeutics, design and development of an epitope-based vaccine and antibody production. However, the identification of epitopes with experimental mapping approaches is a challenging job and usually requires extensive laboratory efforts. However, considerable efforts have been placed for the identification of epitopes using computational methods in the recent past but deprived of considerable achievements. In this study, we present LBCEPred, a python-based web-tool (http://lbcepred.pythonanywhere.com/), build with random forest classifier and statistical moment-based descriptors to predict the B-cell epitopes from the protein sequences. LBECPred outperforms all sequence-based available models that are currently in use for the B-cell epitopes prediction, with 0.868 accuracy value and 0.934 area under the curve. Moreover, the prediction performance of proposed models compared to other state-of-the-art models is 56.3% higher on average for Mathews Correlation Coefficient. LBCEPred is easy to use tool even for novice users and has also shown the models stability and reliability, thus we believe in its significant contribution to the research community and the area of bioinformatics.
Background: Allergens are antigens that can stimulate an atopic type I human hypersensitivity reaction by an immunoglobulin E (IgE) reaction. Some proteins are naturally allergenic than others. The challenge for toxicologists is to identify properties that allow proteins to cause allergic sensitization and allergic diseases. The identification of allergen proteins is a very critical and pivotal task. The experimental identification of protein functions is a hectic, laborious and costly task; therefore, computer scientists have proposed various methods in the field of computational biology and bioinformatics using various data science approaches. Objectives: Herein, we report a novel predictor for the identification of allergen proteins. Methods: For feature extraction, statistical moments and various position-based features have been incorporated into Chou’s pseudo amino acid composition (PseAAC), and are used for training of a neural network. Results: The predictor is validated through 10-fold cross-validation and Jackknife testing, which gave 99.43% and 99.87% accurate results. Conclusions: Thus, the proposed predictor can help in predicting the Allergen proteins in an efficient and accurate way and can provide baseline data for the discovery of new drugs and biomarkers.
This communication examines Darcy-Forchheimer 3D nanoliquid flow by a rotating disk with heat generation/absorption. Impacts of Brownian movement and thermophoretic are considered. Velocity, concentration and temperature slips at surface of rotating disk are utilized. The change from the nonlinear partial differential framework to the nonlinear ordinary differential framework is assumed into position by utilizing appropriate variables. Shooting technique is utilized to develop numerical solution of resulting framework. Graphs have been sketched just to examine that how concentration and temperature fields are affected by several pertinent flow parameters. Skin frictions and local Sherwood and Nusselt numbers are additionally plotted and analyzed. Furthermore, the concentration and temperature fields are enhanced for larger values of thermophoresis parameter.
Entropy generation plays a significant role in several complex processes, extending from cosmology to biology. The entropy generation minimization procedure can be applied for the optimization of mechanical systems including heat exchangers, elements of nuclear and thermal power plants, ventilation and air-conditioning systems. In order to present our analysis, entropy generation in a thin film flow of second grade nanofluid holding single-walled carbon nanotubes (SWCNTs) and multi-walled carbon nanotubes (MWCNTs) with a Cattaneo–Christov heat flux model is studied in this article. The flow is considered passing a linearly extending surface. A variable magnetic field with aligned angle is functioned along the extending sheet. With the aid of the homotopy analysis method (HAM), the fluid flow model is elucidated. The impressions of embedded factors on the flow are obtainable through figures and discussed in detail. It is observed that the velocity profile escalated with the increasing values of volume fraction of nanoparticles and second grade fluid parameter. The higher values of volume fraction of nanoparticles, second grade fluid parameter, non-linear heat source/sink, and thermal radiation parameter intensified the temperature profile. Surface drag force escalated with heightening values of nanoparticles volume fraction, unsteadiness, film thickness, magnetic, and second grade fluid parameters. Entropy generation increased with enhancing values of magnetic parameter, Brinkman number, and Reynolds number.