Wanxin Yang

Ms. Wanxin Yang

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 October 2023 in Methods in Ecology and Evolution
Verified
Journal Article
Open access
PWPhil Wilkes
Phil Wilkes
MDMathias Disney
Mathias Disney
JAJohn Armston
John Armston
HBHarm Bartholomeus
Harm Bartholomeus
LBLisa Patrick Bentley
Lisa Patrick Bentley
WYWanxin Yang
Wanxin Yang
Above‐ground biomass (AGB) is an important metric used to quantify the mass of carbon stored in terrestrial ecosystems. For forests, this is routinely estimated at the plot scale (typically 1 ha) using inventory measurements and allometry. In recent years, terrestrial laser scanning (TLS) has appeared as a disruptive technology that can generate a more accurate assessment of tree and plot scale AGB; however, operationalising TLS methods has had to overcome a number of challenges. One such challenge is the segmentation of individual trees from plot level point clouds that are required to estimate woody volume, this is often done manually (e.g. with interactive point cloud editing software) and can be very time consuming. Here we presentTLS2trees, an automated processing pipeline and set of Python command line tools that aims to redress this processing bottleneck.TLS2treesconsists of existing and new methods and is specifically designed to be horizontally scalable. The processing pipeline is demonstrated on 7.5 ha of TLS data captured across 10 plots of seven forest types; from open savanna to dense tropical rainforest. A total of 10,557 trees are segmented withTLS2trees: these are compared to 1281 manually segmented trees. Results indicate thatTLS2treesperforms well, particularly for larger trees (i.e. the cohort of largest trees that comprise 50% of total plot volume), where plot‐wise tree volume bias is ±0.4 m3and %RMSE is 60%. Segmentation performance decreases for smaller trees, for example where DBH ≤10 cm; a number of reasons are suggested including performance of semantic segmentation step. The volume and scale of TLS data captured in forest plots is increasing. It is suggested that to fully utilise this data for activities such as monitoring, reporting and verification or as reference data for satellite missions an automated processing pipeline, such asTLS2trees, is required. To facilitate improvements toTLS2trees, as well as modification for other laser scanning modes (e.g. mobile and UAV laser scanning),TLS2treesis a free and open‐source software.

3 June 2024 in Remote Sensing in Ecology and Conservation
Verified
Journal Article
Open access
WYWanxin Yang
Wanxin Yang
PWPhil Wilkes
Phil Wilkes
MVMatheus B. Vicari
Matheus B. Vicari
KHKate Hand
Kate Hand
Kim CaldersKim Calders
Kim Calders
MDMathias Disney
Mathias Disney
Accurate quantification of tree architecture is critical to interpreting the growth, health and functioning of trees and forests. Terrestrial laser scanning (TLS) offers millimetre‐level point cloud data, but current approaches to 3D tree reconstruction from TLS point clouds primarily focus on retrieving total volume at tree scale for aboveground biomass (AGB) estimation. Few methods have been designed specifically to provide tree architectural properties, including branch‐level morphology and topology, rather than AGB; derived topological traits have tended to be a compromise, and of secondary importance to volume. We present Treegraph, a new approach explicitly designed to retrieve the architectural traits of trees at multiple scales, from the whole tree scale down to individual branches and internodes, using TLS data with limited assumptions about tree form. It provides morphological traits such as branch length and diameter, alongside topological traits including parent–daughter connections of branches and internodes, furcation (branching) number and branch order. We compare Treegraph‐derived morphological and topological traits with manual measurements of branches from eight destructively harvested trees, yielding RMSE values of 0.60 m (5.96%) for branch length, 2.99 cm (33.45%) for branch diameter, 0.46 (19.38%) for furcation number and 0.08 m (33.16%) for internode length, respectively. In a broader application to 603 trees from tropical, temperate and urban forests, we demonstrate that the derived morphological and topological traits support testing of structure‐related metabolic scaling theories. Testing branches over 10 cm in diameter across 18 657 branching nodes shows that Treegraph‐derived branch‐level scaling exponents deviate from WBE predictions, exhibiting area‐preserving behaviour while displaying asymmetry in length and diameter of daughter branches. Available as open‐source Python software, Treegraph provides fine‐level branching network information, promoting improved insights into tree structure and function. This data‐driven approach reduces the need for empirical heuristic parameters, which has the potential for advancing large‐scale ecological studies on tree architecture.

30 August 2019 in Applied Sciences
Verified
Journal Article
Open access
PDF file
Xianglei LiuXianglei Liu
Xianglei Liu
WHwang hui
wang hui
HMHuang Ming
Huang Ming
WYWanxin Yang
Wanxin Yang
Ground-based synthetic aperture radar (GBSAR) technology has been widely used for bridge dynamic deflection measurements due to its advantages of non-contact measurements, high frequency, and high accuracy. To reduce the influence of noise in dynamic deflection measurements of bridges using GBSAR—especially for noise of the instantaneous vibrations of the instrument itself caused by passing vehicles—an improved second-order blind identification (SOBI) signal de-noising method is proposed to obtain the de-noised time-series displacement of bridges. First, the obtained time-series displacements of three adjacent monitoring points in the same time domain are selected as observation signals, and the second-order correlations among the three time-series displacements are removed using a whitening process. Second, a mixing matrix is calculated using the joint approximation diagonalization technique for covariance matrices and to further obtain three separate signal components. Finally, the three separate signal components are converted in the frequency domain using the fast Fourier transform (FFT) algorithm, and the noise signal components are identified using a spectrum analysis. A new, independent, separated signal component matrix is generated using a zeroing process for the noise signal components. This process is inversely reconstructed using a mixing matrix to recover the original amplitude of the de-noised time-series displacement of the middle monitoring point among three adjacent monitoring points. The results of both simulated and on-site experiments show that the improved SOBI method has a powerful signal de-noising ability.

8 June 2019 in Sensors
Verified
Journal Article
Open access
PDF file
Xianglei LiuXianglei Liu
Xianglei Liu
SSSu Shan
Su Shan
JMJing Ma
Jing Ma
WYWanxin Yang
Wanxin Yang
This study proposes a novel instantaneous total energy method to perform an activity analysis of ground fissures deformation, which is calculated by integrating the extreme-point symmetric mode decomposition (ESMD) method and kinetic energy based on the time-series displacement acquired by shape acceleration array (SAA) sensors. The proposed method is tested on the Xiwang Road fissure in Beijing, China. First, to fully monitor the hanging wall and footwall of the monitored ground fissure, a 4 m-long SAA in the vertical direction and an 8 m-long SAA in the horizontal direction were embedded in a ground fissure to obtain an accurate time-series displacement with an accuracy of ±1.5 mm/32 m and a displacement acquisition frequency of once an hour. Second, to improve the accuracy of the activity analysis, the ESMD method and Spearman’s rho are applied to perform signal denoising of the original time-series displacement obtained by the SAA sensors. Finally, the instantaneous total energy is obtained to analyze the activity of the monitored ground fissure. The results demonstrate that the proposed method is more reliable to reflect the activity of a monitored ground fissure compared to the time-series displacement.

11 December 2022 in bioRxiv
Verified
Preprint
Open access
PDF file
PWPhil Wilkes
Phil Wilkes
MDMathias Disney
Mathias Disney
JAJohn Armston
John Armston
HBHarm Bartholomeus
Harm Bartholomeus
LBLisa Bentley
Lisa Bentley
WYWanxin Yang
Wanxin Yang
Above Ground Biomass (AGB) is an important metric used to quantify the mass of carbon stored in terrestrial ecosystems. For forests, this is routinely estimated at the plot scale (typically ≥1 ha) using inventory measurements and allometry. In recent years, Terrestrial Laser Scanning (TLS) has appeared as a disruptive technology that can generate a more accurate assessment of tree and plot scale AGB; however, operationalising TLS methods has had to overcome a number of challenges. One such challenge is the segmentation of individual trees from plot level point clouds that are required to estimate woody volume, this is often done manually (e.g. with interactive point cloud editing software) and can be very time consuming. Here we present TLS2trees , an automated processing pipeline and set of Python command line tools that aims to redress this processing bottleneck. TLS2trees consists of existing and new methods and is specifically designed to be horizontally scalable. The processing pipeline is demonstrated across 10 plots of 7 forest types; from open savanna to dense tropical rainforest, where a total of 10,557 trees are segmented. TLS2trees segmented trees are compared to 1,281 manually segmented trees. Results indicate that TLS2trees performs well, particularly for larger trees (i.e. the cohort of largest trees that comprise 50% of total plot volume), where plot-wise tree volume bias is ±0.4 m 3 and %RMSE is ~ 60%. To facilitate improvements to the presented methods as well as modification for other laser scanning modes (e.g. mobile and UAV laser scanning), TLS2trees is a free and open-source software (FOSS).

16 February 2026 in Earth System Science Data
Verified
Journal Article
Open access
CCCecilia Chavana-Bryant
Cecilia Chavana-Bryant
PWPhil Wilkes
Phil Wilkes
WYWanxin Yang
Wanxin Yang
ABAndrew Burt
Andrew Burt
PVPeter Vines
Peter Vines
MDMathias Disney
Mathias Disney
The ForestScan project was conceived to evaluate new technologies for characterising forest structure and biomass at Forest Biomass Reference Measurement Sites (FBRMS). It is closely aligned with other international initiatives, particularly the Committee on Earth Observation Satellites (CEOS) Working Group on Calibration and Validation (WGCV) aboveground biomass (AGB) cal/val protocols, and is part of GEO-TREES, an international consortium dedicated to establishing a global network of Forest Biomass Reference Measurement Sites (FBRMS) to support EO and encourage investment in relevant field-based observations and science. ForestScan is the first demonstration of what can be achieved more broadly under GEO-TREES, which would significantly expand and enhance the use of EO-derived AGB estimates. We present data from the ForestScan project, a unique multiscale dataset of tropical forest three-dimensional (3D) structural measurements, including terrestrial laser scanning (TLS), unpiloted aerial vehicle laser scanning (UAV-LS), airborne laser scanning (ALS), and in-situ tree census and ancillary data. These data are critical for the calibration and validation of EO estimates of forest biomass, as well as providing broader insights into tropical forest structure. Data are presented for three FBRMS: FBRMS-01: Paracou, French Guiana; FBRMS-02: Lopé, Gabon; and FBRMS-03: Kabili-Sepilok, Malaysia. Field data for each site include new 3D LiDAR measurements combined with plot tree census and ancillary data, at a multi-hectare scale. Not all data types were collected at all sites, reflecting the practical challenges of field data collection. We also provide detailed data collection protocols and recommendations for TLS, UAV-LS, ALS and plot census measurements for each site, along with requirements for ancillary data to enable integration with ALS data (where possible) and upscaling to EO estimates. We outline the requirements and challenges for field data collection for each data type and discuss the practical considerations for establishing new FBRMS or upgrading existing sites to FBRMS standard, including insights into the associated costs and benefits. All datasets described in this study are openly available. The TLS, UAV-LS and ALS datasets are provided through the ForestScan Project Data Collection in the CEDA archive (https://doi.org/10.5285/88a8620229014e0ebacf0606b302112d, Chavana-Bryant et al., 2025l). Tree census and plot description data for FBRMS-01 (Paracou, French Guiana) are hosted in the CIRAD Dataverse (https://doi.org/10.18167/DVN1/94XHID, Derroire et al., 2025b). Tree census and ancillary data for FBRMS-02 (Lopé, Gabon) and FBRMS-03 (Kabili-Sepilok, Malaysia) are available via a ForestPlots.net data package (https://doi.org/10.5521/forestplots.net/2025_2, Chavana-Bryant et al., 2025k). Together, these repositories provide access to the complete set of datasets released as part of the ForestScan project.