Maria Zharkova

Dr. Maria Zharkova

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Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 April 2019 in Frontiers in Cellular and Infection Microbiology
Verified
Journal Article
Open access
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MZMaria Zharkova
Maria Zharkova
DODmitriy S. Orlov
Dmitriy S. Orlov
Olga Yu. GolubevaOlga Yu. Golubeva
Olga Yu. Golubeva
OCOleg B. Chakchir
Oleg B. Chakchir
IEIgor Eliseev
Igor Eliseev
Olga ShamovaOlga Shamova
Olga Shamova
Rapidly growing resistance of pathogenic bacteria to conventional antibiotics leads to inefficiency of traditional approaches of countering infections and determines the urgent need for a search of fundamentally new anti-infective drugs. Antimicrobial peptides (AMPs) of the innate immune system are promising candidates for a role of such novel antibiotics. However, some cytotoxicity of AMPs toward host cells limits their active implementation in medicine and forces attempts to design numerous structural analogs of the peptides with optimized properties. An alternative route for the successful AMPs introduction may be their usage in combination with conventional antibiotics. Synergistic antibacterial effects have been reported for a number of such combinations, however, the molecular mechanisms of the synergy remain poorly understood and little is known whether AMPs cytotoxicy for the host cells increases upon their application with antibiotics. Our study is directed to examination of a combined action of natural AMPs with different structure and mode of action (porcine protegrin 1, caprine bactenecin ChBac3.4, human alpha- and beta-defensins (HNP-1, HNP-4, hBD-2, hBD-3), human cathelicidin LL-37), and egg white lysozyme with varied antibiotic agents (gentamicin, ofloxacin, oxacillin, rifampicin, polymyxin B, silver nanoparticles) toward selected bacteria, including drug-sensitive and drug-resistant strains, as well as toward some mammalian cells (human erythrocytes, PBMC, neutrophils, murine peritoneal macrophages and Ehrlich ascites carcinoma cells). Using “checkerboard titrations” for fractional inhibitory concentration indexes evaluation, it was found that synergy in antibacterial action mainly occurs between highly membrane-active AMPs (e.g., protegrin 1, hBD-3) and antibiotics with intracellular targets (e.g., gentamicin, rifampcin), suggesting bioavailability increase as the main model of such interaction. In some combinations modulation of dynamics of AMP-bacterial membrane interaction in presence of the antibiotic was also shown. Cytotoxic effects of the same combinations toward normal eukaryotic cells were rarely synergistic. The obtained data approve that combined application of antimicrobial peptides with antibiotics or other antimicrobials is a promising strategy for further development of new approach for combating antibiotic-resistant bacteria by usage of AMP-based therapeutics. Revealing the conventional antibiotics that increase the activity of human endogenous AMPs against particular pathogens is also important for cure strategies elaboration.

23 June 2019 in Marine Drugs
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Journal Article
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DODmitriy Orlov
Dmitriy Orlov
Olga ShamovaOlga Shamova
Olga Shamova
IEIgor Eliseev
Igor Eliseev
MZMaria Zharkova
Maria Zharkova
OCOleg B. Chakchir
Oleg B. Chakchir
SPSabrina Pacor
Sabrina Pacor
Arenicin-1, a β-sheet antimicrobial peptide isolated from the marine polychaeta Arenicola marina coelomocytes, has a potent, broad-spectrum microbicidal activity and also shows significant toxicity towards mammalian cells. Several variants were rationally designed to elucidate the role of structural features such as cyclization, a certain symmetry of the residue arrangement, or the presence of specific residues in the sequence, in its membranolytic activity and the consequent effect on microbicidal efficacy and toxicity. The effect of variations on the structure was probed using molecular dynamics simulations, which indicated a significant stability of the β-hairpin scaffold and showed that modifying residue symmetry and β-strand arrangement affected both the twist and the kink present in the native structure. In vitro assays against a panel of Gram-negative and Gram-positive bacteria, including drug-resistant clinical isolates, showed that inversion of the residue arrangement improved the activity against Gram-negative strains but decreased it towards Gram-positive ones. Variants with increased symmetry were somewhat less active, whereas both backbone-cyclized and linear versions of the peptides, as well as variants with R→K and W→F replacement, showed antimicrobial activity comparable with that of the native peptide. All these variants permeabilized both the outer and the inner membranes of Escherichia coli, suggesting that a membranolytic mechanism of action was maintained. Our results indicate that the arenicin scaffold can support a considerable degree of variation while maintaining useful biological properties and can thus serve as a template for the elaboration of novel anti-infective agents.

8 January 2020 in Autoimmunity
Verified
Journal Article
Closed access
EUEkaterina Umnyakova
Ekaterina Umnyakova
MZMaria Zharkova
Maria Zharkova
MBMikhail N. Berlov
Mikhail N. Berlov
Olga ShamovaOlga Shamova
Olga Shamova
VKVladimir N. Kokryakov
Vladimir N. Kokryakov
Antimicrobial peptides (AMPs) were firstly discovered as cytotoxic substances that killed bacteria. Later they were described as biologically active peptides that are able not only to kill invaders but also to modulate host immunity. In particular, it is shown that human antimicrobial peptides are able to influence the activity of different innate and adaptive immunity components, thus, obviously, they also participate in autoimmune processes. In this review we discuss the nature of human AMPs and analyze their role in such autoimmune disorders like type 1 diabetes mellitus, rheumatoid arthritis, systemic lupus erythematosus, psoriasis, Crohn’s disease and sarcoidosis. These peptides were shown to have a “double-sided” influence on the autoimmune disease pathogenesis. Thus, described facts should be taken into account for the development of new pharmaceutical agents to cure patients with autoimmune disorders. These agents could derive from natural antimicrobial peptides that in some cases modulate immune response. For example, it was shown that human AMPs are able to modulate complement system dysregulation of which is known to be one of the most dangerous pathogenic factors during autoimmune processes.

1 January 2016 in Glass Physics and Chemistry
Verified
Journal Article
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Olga Yu. GolubevaOlga Yu. Golubeva
Olga Yu. Golubeva
Olga ShamovaOlga Shamova
Olga Shamova
AYA. V. Yakovlev
A. V. Yakovlev
MZMaria Zharkova
Maria Zharkova

14 January 2023 in Pharmaceutics
Verified
Journal Article
Open access
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MZMaria Zharkova
Maria Zharkova
AKAleksey S. Komlev
Aleksey S. Komlev
TFTatiana A. Filatenkova
Tatiana A. Filatenkova
MSMaria S. Sukhareva
Maria S. Sukhareva
EVElizaveta V. Vladimirova
Elizaveta V. Vladimirova
Olga ShamovaOlga Shamova
Olga Shamova
Antimicrobial peptides (AMPs) are acknowledged as a promising template for designing new antimicrobials. At the same time, existing toxicity issues and limitations in their pharmacokinetics make topical application one of the less complicated routes to put AMPs-based therapeutics into actual medical practice. Antiseptics are one of the common components for topical treatment potent against antibiotic-resistant pathogens but often with toxicity limitations of their own. Thus, the interaction of AMPs and antiseptics is an interesting topic that is also less explored than combined action of AMPs and antibiotics. Herein, we analyzed antibacterial, antibiofilm, and cytotoxic activity of combinations of both membranolytic and non-membranolytic AMPs with a number of antiseptic agents. Fractional concentration indices were used as a measure of possible effective concentration reduction achievable due to combined application. Cases of both synergistic and antagonistic interaction with certain antiseptics and surfactants were identified, and trends in the occurrence of these types of interaction were discussed. The data may be of use for AMP-based drug development and suggest that the topic requires further attention for successfully integrating AMPs-based products in the context of complex treatment. AMP/antiseptic combinations show promise for creating topical formulations with improved activity, lowered toxicity, and, presumably, decreased chances of inducing bacterial resistance. However, careful assessment is required to avoid AMP neutralization by certain antiseptic classes in either complex drug design or AMP application alongside other therapeutics/care products.

1 November 2018 in Glass Physics and Chemistry
Verified
Journal Article
Closed access
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Olga Yu. GolubevaOlga Yu. Golubeva
Olga Yu. Golubeva
NUN. Yu. Ul’YAnova
N. Yu. Ul’YAnova
MZMaria Zharkova
Maria Zharkova
Olga ShamovaOlga Shamova
Olga Shamova
The biological activity of zeolites with Rho, Betaand paulingite structures modified with silver nanoparticles and clusters of 3 and 6 wt % is studied. The antimicrobial activity is studied...