SUBARNA POKHREL

Dr. SUBARNA POKHREL

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Research Focus & Metrics

Academic Career Length

57Years (1970-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 November 2019 in Molecules
Verified
Journal Article
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ABAcharya Balkrishna
Acharya Balkrishna
SPSUBARNA POKHREL
SUBARNA POKHREL
MTMeenu Tomer
Meenu Tomer
SVSudeep Verma
Sudeep Verma
AKAjay Kumar
Ajay Kumar
AVAnurag Varshney
Anurag Varshney
Alzheimer’s disease (AD), a neurodegenerative disease, is the most common form of dementia. Inhibition of acetylcholinesterase (AChE) is a common strategy for the treatment of AD. In this study, aqueous, hydro-methanolic, and methanolic extracts of five potent herbal extracts were tested for their in vitro anti-AChE activity. Among all, the Tinospora cordifolia (Giloy) methanolic fraction performed better with an IC50 of 202.64 µg/mL. Of the HPLC analyzed components of T. cordifolia (methanolic extract), palmatine and berberine performed better (IC50 0.66 and 0.94 µg/mL, respectively) as compared to gallic acid and the tool compound “galantamine hydrobromide” (IC50 7.89 and 1.45 µg/mL, respectively). Mode of inhibition of palmatine and berberine was non-competitive, while the mode was competitive for the tool compound. Combinations of individual alkaloids palmatine and berberine resulted in a synergistic effect for AChE inhibition. Therefore, the AChE inhibition by the methanolic extract of T. cordifolia was probably due to the synergism of the isoquinoline alkaloids. Upon molecular docking, it was observed that palmatine and berberine preferred the peripheral anionic site (PAS) of AChE, with π-interactions to PAS residue Trp286, indicating that it may hinder the substrate binding by partially blocking the entrance of the gorge of the active site or the product release.

30 July 2019 in Molecules
Verified
Journal Article
Open access
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ABAcharya Balkrishna
Acharya Balkrishna
SDSubrata K Das
Subrata K Das
SPSUBARNA POKHREL
SUBARNA POKHREL
AJAlpana Joshi
Alpana Joshi
LALaxmi
Laxmi
CJC S Joshi
C S Joshi
Colchicine was extracted from Gloriosa superba seeds using the Super Critical Fluid (CO2) Extraction (SCFE) technology. The seeds were purified upto 99.82% using column chromatography. Colchicine affinity was further investigated for anticancer activity in six human cancer cell lines, i.e., A549, MCF-7, MDA-MB231, PANC-1, HCT116, and SiHa. Purified colchicine showed the least cell cytotoxicity and antiproliferation and caused no G2/M arrest at clinically acceptable concentrations. Mitotic arrest was observed in only A549 and MDA-MB231 cell lines at 60 nM concentration. Our finding indicated the possible use of colchicine at a clinically acceptable dose and provided insight into the science behind microtubule destabilization. However, more studies need to be conducted beforethese findings could be established.

1 February 2013 in Biotechnology and Bioprocess Engineering
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Journal Article
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SPSUBARNA POKHREL
SUBARNA POKHREL
Jeong Chan JooJeong Chan Joo
Jeong Chan Joo
YYYoung Je Yoo
Young Je Yoo

14 September 2021 in Combinatorial Chemistry & High Throughput Screening
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ABAcharya Balkrishna
Acharya Balkrishna
SPSUBARNA POKHREL
SUBARNA POKHREL
AVAnurag Varshney
Anurag Varshney
Background: SARS-CoV-2 has been shown to bind the host cell ACE2 receptor through its spike protein receptor binding domain (RBD), required for its entry into the host cells. Objective: We have screened phytocompounds from a medicinal herb, Tinospora cordifolia, for their capacities to interrupt the viral RBD and host ACE2 interactions. Methods: We employed molecular docking to screen phytocompounds in T. cordifolia against the ACE2-RBD complex, performed molecular dynamics (MD) simulation, and estimated the electrostatic component of binding free energy. Results: ‘Tinocordiside’ docked very well at the center of the interface of ACE2-RBD complex, and was found to be well stabilized during MD simulation. Tinocordiside incorporation significantly decreased the electrostatic component of binding free energies of the ACE2-RBD complex (23.5 and 17.10 kcal/mol in the trajectories without or with the ligand, respectively). As the basal rate constant of protein association is in the order of 5 (105 to 106 M-1S-1), there might be no big conformational change or loop reorganization, but involves only local conformational change typically observed in the diffusion-controlled association. Taken together, the increase in global flexibility of the complex clearly indicates the start of unbinding process of the complex. Conclusion: It indicates that such an interruption of electrostatic interactions between the RBD and ACE2, and the increase in global flexibility of the complex would weaken or block SARSCoV- 2 entry and its subsequent infectivity. We postulate that natural phytochemicals like Tinocordiside could be viable options for controlling SARS-CoV-2 contagion and its entry into host cells.

1 December 2012 in Process Biochemistry
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SPSUBARNA POKHREL
SUBARNA POKHREL
Jeong Chan JooJeong Chan Joo
Jeong Chan Joo
YKYong Hwan Kim
Yong Hwan Kim
YYYoung Je Yoo
Young Je Yoo

1 November 2008 in Journal of Molecular Catalysis B: Enzymatic
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Journal Article
Closed access
SKSeok Hwan Kim
Seok Hwan Kim
SPSUBARNA POKHREL
SUBARNA POKHREL
YYYoung Je Yoo
Young Je Yoo