Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record.Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2(158 cm2) to 100 km2(1,000,000,000,000 cm2).Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year.Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.Software format: .csv and .SQL.
1 January 2011 in Deep Sea Research Part II: Topical Studies in Oceanography
There are only few studies on shallow Antarctic benthic communities associated with habitats affected by intense mineral sedimentation inflow. The analysis of macrofaunal communities associated with two shallow, isolated glacial coves was performed in Admiralty Bay (King George Island) and compared with non-disturbed sites. Multivariate analyses (hierarchical classification, nMDS) clearly separated glacial cove communities (two assemblages) from the sites situated outside both basins (two assemblages). The community influenced by the streamflow of glacial discharge of meltwater situated in the area with sandy–clay–silt sediments had a very low species richness, diversity and abundance. It was dominated by eurytopic, motile deposit feeding polychaetes such as Mesospiomoorei, Tharyxcincinnatus and Leitoscoloploskerguelensis as well as the bivalve Yoldiaeightsi. The second glacial community of the area located at a grater distance from the outlet of the stream was characterized by sandy–clay–silt and clay–silt deposits and showed also a low diversity and species richness. The most abundant here were peracarid crustaceans, with the dominant opportunistic feeder Cheirimedonfemoratus. Community from the non-disturbed area with silty–clay–sand, and silty–sand sediments had higher species richness and diversity. The assemblage of fauna from the sandy bottom has values of those two indexes similar to those found in the disturbed areas.
Amphipod crustaceans were collected at all 55 stations sampled with an epibenthic sledge during two IceAGE expeditions (Icelandic marine Animals: Genetics and Ecology) in 2011 and 2013. In total, 34 amphipod families and three superfamilies were recorded in the samples. Distribution maps are presented for each taxon along with a summary of the regional taxonomy for the group. Statistical analyses based on presence/absence data revealed a pattern of family distributions that correlated with sampling depth. Clustering according to the geographic location of the stations (northernmost North Atlantic Sea and Arctic Ocean) can also be observed. IceAGE data for the Amphilochidae and Oedicerotidae were analysed on species level; in case of the Amphilochidae they were compared to the findings from a previous Icelandic benthic survey, BIOICE (Benthic Invertebrates of Icelandic waters), which also identified a high abundance of amphipod fauna.
The distribution patterns of macrozoobenthic communities as shown by the biomass of the higher taxa were investigated in Admiralty Bay. Material was collected at depths ranging from 4 to 500 m (102 quantitative samples), representing the full depth range of this basin and including areas characterized by the different levels of glacial influence. Five community groups were distinguished by multivariate analysis (clustering, MDS) based on the Bray--Curtis similarity index. In the Ezcurra Inlet, the area characterized by intensive glacial processes resulting in a high sedimentation rate, the distribution of biomass was not depth related, but was associated with the intensity of glacial disturbance along the axis of the fjord. The innermost part of this fjord, which receives strong outflows from glaciers, had a low biomass value (2.9 g/0.1 m2) and was dominated by polychaetes. The middle part of the fjord which is not so heavily disturbed had higher biomass values (46.1 g/0.1 m2) due to the dominance of bivalves. A clear depth gradient of biomass distribution was observed in bottom areas located far from glaciers, in the central basin of the bay, with three zones within the depth ranges 4–30, 40–380, and 400–500 m. The highest mean biomass values (92.5 g/0.1 m2) were found in the middle sublittoral (40–380 m) dominated by ascidians. In the shallow and deep assemblages, the biomass was lower (33.8 g/0.1 and 30.9 g/0.1 m2 respectively), most probably associated with the ice disturbance in the shallows and lower food supply in the deepest part of the shelf.