Peng Yan

Dr. Peng Yan


Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 November 2012 in PLOS ONE
Verified
Journal Article
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XZXianwen Zhang
Xianwen Zhang
JLJiaping Li
Jiaping Li
ALAiling Liu
Ailing Liu
JZJie Zou
Jie Zou
XZXiaoyun Zhou
Xiaoyun Zhou
XCXinbo Chen
Xinbo Chen
Rice at reproductive stage is more sensitive to environmental changes, and little is known about the mechanism of heat response in rice panicle. Here, using rice microarray, we provided a time course gene expression profile of rice panicle at anther developmental stage 8 after 40°C treatment for 0 min, 20 min, 60 min, 2 h, 4 h, and 8 h. The identified differentially expressed genes were mainly involved in transcriptional regulation, transport, cellular homeostasis, and stress response. The predominant transcription factor gene families responsive to heat stress were Hsf, NAC, AP2/ERF, WRKY, MYB, and C2H2. KMC analysis discovered the time-dependent gene expression pattern under heat stress. The motif co-occurrence analysis on the promoters of genes from an early up-regulated cluster showed the important roles of GCC box, HSE, ABRE, and CE3 in response to heat stress. The regulation model central to ROS combined with transcriptome and ROS quantification data in rice panicle indicated the great importance to maintain ROS balance and the existence of wide cross-talk in heat response. The present study increased our understanding of the heat response in rice panicle and provided good candidate genes for crop improvement.

15 August 2013 in Plant Cell Reports
Verified
Journal Article
Closed access
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JXJianhua Xiang
Jianhua Xiang
JRJing Ran
Jing Ran
JZJie Zou
Jie Zou
XZXiaoyun Zhou
Xiaoyun Zhou
ALAiling Liu
Ailing Liu
XCXinbo Chen
Xinbo Chen

16 November 2013 in Plant Molecular Biology Reporter
Verified
Journal Article
Closed access
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XZXiaoyun Zhou
Xiaoyun Zhou
MJMatthew A. Jenks
Matthew A. Jenks
JLJuan Liu
Juan Liu
ALAiling Liu
Ailing Liu
XZXiangwen Zhang
Xiangwen Zhang
XCXinbo Chen
Xinbo Chen

2 January 2015 in PLOS ONE
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Journal Article
Open access
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XZXiaoyun Zhou
Xiaoyun Zhou
LLLinzhi Li
Linzhi Li
JXJianhua Xiang
Jianhua Xiang
GGGuofu Gao
Guofu Gao
FXFaxi Xu
Faxi Xu
XWXiangyuan Wan
Xiangyuan Wan
Cuticular wax covers aerial organs of plants and functions as the outermost barrier against non-stomatal water loss. We reported here the functional characterization of the Glossy1(GL1)-homologous gene OsGL1-3 in rice using overexpression and RNAi transgenic rice plants. OsGL1-3 gene was ubiquitously expressed at different level in rice plants except root and its expression was up-regulated under ABA and PEG treatments. The transient expression of OsGL1-3–GFP fusion protein indicated that OsGL1-3 is mainly localized in the plasma membrane. Compared to the wild type, overexpression rice plants exhibited stunted growth, more wax crystallization on leaf surface, and significantly increased total cuticular wax load due to the prominent changes of C30–C32 aldehydes and C30 primary alcohols. While the RNAi knockdown mutant of OsGL1-3 exhibited no significant difference in plant height, but less wax crystallization and decreased total cuticular wax accumulation on leaf surface. All these evidences, together with the effects of OsGL1-3 on the expression of some wax synthesis related genes, suggest that OsGL1-3 is involved in cuticular wax biosynthesis. Overexpression of OsGL1-3 decreased chlorophyll leaching and water loss rate whereas increased tolerance to water deficit at both seedling and late-tillering stages, suggesting an important role of OsGL1-3 in drought tolerance.

7 April 2025 in Journal of Integrative Plant Biology
Verified
Journal Article
Open access
Bohan LiuBohan Liu
Bohan Liu
SMShuan Meng
Shuan Meng
JYJianchang Yang
Jianchang Yang
Jun WuJun Wu
Jun Wu
PYPeng Yan
Peng Yan
NYNenghui Ye
Nenghui Ye
Both the filling and development of grain are key processes determining agriculture production and reproductive growth in rice. The processes of grain filling and endosperm development are crucial for the accumulation of major storage compounds in rice grains. This requires extensive remobilization of carbon reserves from source to sink and the precise regulation of sucrose‐to‐starch conversion. Both the developmental sequence of the panicle and environmental signals influence the carbon flow between the leaves, leaf sheath, stem, and spikelets during grain filling. This, in turn, affects endosperm development and the production of storage compounds. In this review, we synthesize recent insight into grain development in rice, focusing on the dynamic changes in phytohormones and how their homeostasis integrates developmental and environmental cues to control grain filling in the developing panicle. We also highlight recent advances in the genetic control of carbohydrate remobilization and the transcriptional regulatory networks governing carbohydrate metabolism and grain development in rice. The asynchronous initiation and imbalance in grain filling limit the full yield potential of cereal crops. The “superior/inferior spikelets” serve as a model system for understanding the regulatory mechanisms underlying grain filling and development. Systematic research on carbohydrate flow and phytohormone crosstalk could enhance our understanding of optimizing yield production in cereal crops. Additionally, a thorough analysis of key genetic regulatory mechanisms can offer a genetic foundation and targets for precisely adjusting grain filling traits, ultimately aiding in the development of high‐yield crop varieties.

6 December 2023 in Plant Physiology
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Journal Article
Closed access
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HYHuihui Yu
Huihui Yu
Teng ZhenningTeng Zhenning
Teng Zhenning
BLBohan Liu
Bohan Liu
JLJiahan Lv
Jiahan Lv
YCYinke Chen
Yinke Chen
NYNenghui Ye
Nenghui Ye
Low temperature germination (LTG) is an important agronomic trait for direct-seeding cultivation of rice (Oryza sativa). Both OsMYB30 and OsTPP1 regulate the cold stress response in rice, but the function of OsMYB30 and OsTPP1 in regulating LTG and the underlying molecular mechanism remain unknown. Employing transcriptomics and functional studies revealed a sugar signaling pathway that regulates seed germination in response to low temperature. Expression of OsMYB30 and OsTPP1 was induced by low temperature during seed germination, and overexpressing either OsMYB30 or OsTPP1 delayed seed germination and increased sensitivity to low temperature during seed germination. Transcriptomics and qPCR revealed that expression of OsTPP1 was upregulated in OsMYB30-overexpressing lines but downregulated in OsMYB30-knockout lines. In vitro and in vivo experiments revealed that OsMYB30 bound to the promoter of OsTPP1 and regulated the abundance of OsTPP1 transcripts. Over accumulation of trehalose was found in both OsMYB30- and OsTPP1-overexpressing lines, resulting in inhibition of α-amylase 1a (OsAMY1a) gene during seed germination. Both low temperature and exogenous trehalose treatments suppressed the expression of OsAMY1a, and the osamy1a mutant was not sensitive to exogenous trehalose during seed germination. Overall, we concluded that OsMYB30 expression was induced by low temperature to activate the expression of OsTPP1 and increase trehalose content, which thus inhibited α-Amylase activity and seed germination. This study identified a phytohormone-independent pathway that integrates environmental cues with internal factors to control seed germination.