Basal stem rot (BSR) caused by hemibiotroph Ganoderma boninense is a devastating disease resulting in a major loss to the oil palm industry. Since there is no physical symptom in oil palm at the early stage of G. boninense infection, characterisation of molecular defense responses in oil palm during early interaction with the fungus is of the utmost importance. Oil palm (Elaeis guineensis) seedlings were artificially infected with G. boninense inoculums and root samples were obtained following a time-course of 0, 3, 7, and 11 days-post-inoculation (d.p.i) for RNA sequencing (RNA-seq) and identification of differentially expressed genes (DEGs). The host counter-attack was evidenced based on fungal hyphae and Ganoderma DNA observed at 3 d.p.i which became significantly reduced at 7 and 11 d.p.i. DEGs revealed upregulation of multifaceted defense related genes such as PR-protein (EgPR-1), protease inhibitor (EgBGIA), PRR protein (EgLYK3) chitinase (EgCht) and expansin (EgEXPB18) at 3 d.p.i and 7 d.p.i which dropped at 11 d.p.i. Later stage involved highly expressed transcription factors EgERF113 and EgMYC2 as potential regulators of necrotrophic defense at 11 d.p.i. The reactive oxygen species (ROS) elicitor: peroxidase (EgPER) and NADPH oxidase (EgRBOH) were upregulated and maintained throughout the treatment period. Growth and nutrient distribution were probably compromised through suppression of auxin signalling and iron uptake genes. Based on the analysis of oil palm gene expression, it was deduced that the biotrophic phase of Ganoderma had possibly occurred at the early phase (3 until 7 d.p.i) before being challenged by the fungus via switching its lifestyle into the necrotrophic phase at later stage (11 d.p.i) and finally succumbed the host. Together, the findings suggest the dynamic defense process in oil palm and potential candidates that can serve as phase-specific biomarkers at the early stages of oil palm-G. boninense interaction.

Improving the extent of adaptation and the choice of the most tolerant cultivar is the first step to mitigating the adverse effects of limited water, especially in susceptible plants such as strawberries. To address this issue, two commercial strawberry cultivars (Camarosa and Gaviota) were compared when irrigated to match 100, 75, 50, and 25% field capacity (FC) to simulate the control, slight, moderate, and severe drought stress conditions, respectively. Drought stress induced the reduction of total chlorophyll, carotenoid, relative water content, and phenolic content significantly, whereas the activity of antioxidant enzymes, electrolyte leakage, osmolyte accumulation, and oxidative markers upsurged progressively in drought severity-dependent behavior. Gaviota produced more proline, hydrogen peroxide as a marker of membrane lipid peroxidation and disposed of by higher electrolyte leakage, significantly. On the other hand, Camarosa having higher soluble carbohydrates as well as enzymatic and non-enzymatic antioxidants could be considered a drought-tolerant cultivar. Genotypic variation between these cultivars could be used in breeding projects to promote drought-tolerant strawberries in the future.

The present work was aimed at enhancing the protein production in Dunaliella salina by optimization of culture conditions. The interactive effects of medium composition on protein production were optimized using response surface methodology (RSM). A mathematical model was proposed to describe the kinetics of D. salina growth. Results showed that the mixotrophic effects were in conjunction with those of the mixture of NaCl and glucose. Based on the optimization study, protein production in D. salina could be markedly increased through glucose supplementation as low as 5 g L⁻¹. Optimal conditions were achieved at 288, 288 and 312 h with a doubling time of 1.13, 3.03 and 5.17 days for D₁, D₂ and D₃ strains, respectively. The overall protein production was enhanced by 3.4, 3.9 and 14 times in D₁, D₂ and D₃, respectively. The microplate-based approach enabled us to screen large numbers of experimental cultures in a time and cost effective manner. It also can be concluded that reducing the growth cycle through this cultivation system may expedite the analysis of transformants for production of recombinant proteins in microalgae.