Rivers are important ecosystems under continuous anthropogenic stresses. The hyporheic zone is a ubiquitous, reactive interface between the main channel and its surrounding sediments along the river network. We elaborate on the main physical, biological, and biogeochemical drivers and processes within the hyporheic zone that have been studied by multiple scientific disciplines for almost half a century. These previous efforts have shown that the hyporheic zone is a modulator for most metabolic stream processes and serves as a refuge and habitat for a diverse range of aquatic organisms. It also exerts a major control on river water quality by increasing the contact time with reactive environments, which in turn results in retention and transformation of nutrients, trace organic compounds, fine suspended particles, and microplastics, among others. The paper showcases the critical importance of hyporheic zones, both from a scientific and an applied perspective, and their role in ecosystem services to answer the question of the manuscript title. It identifies major research gaps in our understanding of hyporheic processes. In conclusion, we highlight the potential of hyporheic restoration to efficiently manage and reactivate ecosystem functions and services in river corridors.

Excess nitrogen (N) impairs inland water quality and creates hypoxia in coastal ecosystems. Agriculture is the primary source of N; agricultural management and hydrology together control aquatic ecosystem N loading. Future N loading will be determined by how agriculture and hydrology intersect with climate change, yet the interactions between changing climate and water quality remain poorly understood. Here, we show that changing precipitation patterns, resulting from climate change, interact with agricultural land use to deteriorate water quality. We focus on the 2012–2013 Midwestern U.S. drought as a “natural experiment”. The transition from drought conditions in 2012 to a wet spring in 2013 was abrupt; the media dubbed this “weather whiplash”. We use recent (2010–2015) and historical data (1950–2015) to connect weather whiplash (drought-to-flood transitions) to increases in riverine N loads and concentrations. The drought likely created highly N-enriched soils; this excess N mobilized during heavy spring rains (2013), resulting in a 34% increase (10.5 vs. 7.8 mg N L⁻¹) in the flow-weighted mean annual nitrate concentration compared to recent years. Furthermore, we show that climate change will likely intensify weather whiplash. Increased weather whiplash will, in part, increase the frequency of riverine N exceeding E.P.A. drinking water standards. Thus, our observations suggest increased climatic variation will amplify negative trends in water quality in a region already grappling with severe impairments.

Over half of global rivers and streams lack perennial flow, and understanding the distribution and drivers of their flow regimes is critical for understanding their hydrologic, biogeochemical, and ecological functions. We analyzed nonperennial flow regimes using 540 U.S. Geological Survey watersheds across the contiguous United States from 1979 to 2018. Multivariate analyses revealed regional differences in no‐flow fraction, date of first no flow, and duration of the dry‐down period, with further divergence between natural and human‐altered watersheds. Aridity was a primary driver of no‐flow metrics at the continental scale, while unique combinations of climatic, physiographic and anthropogenic drivers emerged at regional scales. Dry‐down duration showed stronger associations with nonclimate drivers compared to no‐flow fraction and timing. Although the sparse distribution of nonperennial gages limits our understanding of such streams, the watersheds examined here suggest the important role of aridity and land cover change in modulating future stream drying.