Chris Hopkinson

Dr. Chris Hopkinson

Department of Geography, University of Lethbridge, Lethbridge, AB T1K3M4, Canada
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 April 2019 in Remote Sensing
Verified
Journal Article
Open access
PDF file
Meisam AmaniMeisam Amani
Meisam Amani
SMSahel Mahdavi
Sahel Mahdavi
MAMajid Afshar
Majid Afshar
Brian BriscoBrian Brisco
Brian Brisco
Weimin HuangWeimin Huang
Weimin Huang
CHChris Hopkinson
Chris Hopkinson
Although wetlands provide valuable services to humans and the environment and cover a large portion of Canada, there is currently no Canada-wide wetland inventory based on the specifications defined by the Canadian Wetland Classification System (CWCS). The most practical approach for creating the Canadian Wetland Inventory (CWI) is to develop a remote sensing method feasible for large areas with the potential to be updated within certain time intervals to monitor dynamic wetland landscapes. Thus, this study aimed to create the first Canada-wide wetland inventory using Landsat-8 imagery and innovative image processing techniques available within Google Earth Engine (GEE). For this purpose, a large amount of field samples and approximately 30,000 Landsat-8 surface reflectance images were initially processed using several advanced algorithms within GEE. Then, the random forest (RF) algorithm was applied to classify the entire country. The final step was an original CWI map considering the five wetland classes defined by the CWCS (i.e., bog, fen, marsh, swamp, and shallow water) and providing updated and comprehensive information regarding the location and spatial extent of wetlands in Canada. The map had reasonable accuracy in terms of both visual and statistical analyses considering the large area of country that was classified (9.985 million km2). The overall classification accuracy and the average producer and user accuracies for wetland classes exclusively were 71%, 66%, and 63%, respectively. Additionally, based on the final classification map, it was estimated that 36% of Canada is covered by wetlands.

15 July 2016 in Canadian Journal of Remote Sensing
Verified
Journal Article
Open access
CHChris Hopkinson
Chris Hopkinson
LCLaura Chasmer
Laura Chasmer
CGChris Gynan
Chris Gynan
CMCraig Mahoney
Craig Mahoney
MSMichael Sitar
Michael Sitar
Airborne LiDAR is increasingly used in forest carbon, ecosystem, and resource monitoring. For practical design and manufacture reasons, the 1064 nm near-infrared (NIR) wavelength has been the most commonly adopted, and most literature in this field represents sampling characteristics in this wavelength. However, due to eye-safety and application-specific needs, other common wavelengths are 1550 nm and 532 nm. All provide canopy structure reconstructions that can be integrated or compared through space and time but the consistency or complementarity of 3D airborne LiDAR data sampled at multiple wavelengths is poorly understood. Here, we report on multispectral LiDAR missions carried out in 2013 and 2015 over a managed forest research site. The 1st used 3 independent sensors, and the 2nd used a single sensor carrying 3 lasers. The experiment revealed differences in proportions of returns at ground level, vertical foliage distributions, and gap probability across wavelengths. Canopy attenuation was greatest at 532 nm, presumably due to leaf tissue absorption. Relative to 1064 nm, foliage was undersampled at midheight percentiles at 1550 nm and 532 nm. Multisensor data demonstrated differences in foliage characterization due to combined influences of wavelength and acquisition configuration. Single-sensor multispectral data were more stable but demonstrated clear wavelength-dependent variation that could be exploited in intensity-based land cover classification without the aid of 3D derivatives. This work sets the stage for improvements in land surface classification and vertical foliage partitioning through the integration of active spectral and structural laser return information.

22 April 2020 in Remote Sensing
Verified
Journal Article
Open access
PDF file
Laura ChasmerLaura Chasmer
Laura Chasmer
CMCraig Mahoney
Craig Mahoney
Koreen MillardKoreen Millard
Koreen Millard
KNKailyn Nelson
Kailyn Nelson
Daniel L PetersDaniel L Peters
Daniel L Peters
DCDanielle Cobbaert
Danielle Cobbaert
The following review is the second part of a two part series on the use of remotely sensed data for quantifying wetland extent and inferring or measuring condition for monitoring drivers of change on wetland environments. In the first part, we introduce policy makers and non-users of remotely sensed data with an effective feasibility guide on how data can be used. In the current review, we explore the more technical aspects of remotely sensed data processing and analysis using case studies within the literature. Here we describe: (a) current technologies used for wetland assessment and monitoring; (b) the latest algorithmic developments for wetland assessment; (c) new technologies; and (d) a framework for wetland sampling in support of remotely sensed data collection. Results illustrate that high or fine spatial resolution pixels (≤10 m) are critical for identifying wetland boundaries and extent, and wetland class, form and type, but are not required for all wetland sizes. Average accuracies can be up to 11% better (on average) than medium resolution (11–30 m) data pixels when compared with field validation. Wetland size is also a critical factor such that large wetlands may be almost as accurately classified using medium-resolution data (average = 76% accuracy, stdev = 21%). Decision-tree and machine learning algorithms provide the most accurate wetland classification methods currently available, however, these also require sampling of all permutations of variability. Hydroperiod accuracy, which is dependent on instantaneous water extent for single time period datasets does not vary greatly with pixel resolution when compared with field data (average = 87%, 86%) for high and medium resolution pixels, respectively. The results of this review provide users with a guideline for optimal use of remotely sensed data and suggested field methods for boreal and global wetland studies.

16 November 2016 in Global Change Biology
Verified
Journal Article
Closed access
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Laura ChasmerLaura Chasmer
Laura Chasmer
CHChris Hopkinson
Chris Hopkinson

1 February 2025 in Methods in Ecology and Evolution
Verified
Journal Article
Open access
SPStefano Puliti
Stefano Puliti
ELEmily R. Lines
Emily R. Lines
Jana MüllerováJana Müllerová
Jana Müllerová
JFJulian Frey
Julian Frey
Zoe SchindlerZoe Schindler
Zoe Schindler
RARasmus Astrup
Rasmus Astrup
Proximally sensed laser scanning presents new opportunities for automated forest ecosystem data capture. However, a gap remains in deriving ecologically pertinent information, such as tree species, without additional ground data. Artificial intelligence approaches, particularly deep learning (DL), have shown promise towards automation. Progress has been limited by the lack of large, diverse, and, most importantly, openly available labelled single‐tree point cloud datasets. This has hindered both (1) the robustness of the DL models across varying data types (platforms and sensors) and (2) the ability to effectively track progress, thereby slowing the convergence towards best practice for species classification. To address the above limitations, we compiled the FOR‐species20K benchmark dataset, consisting of individual tree point clouds captured using proximally sensed laser scanning data from terrestrial (TLS), mobile (MLS) and drone laser scanning (ULS). Compiled collaboratively, the dataset includes data collected in forests mainly across Europe, covering Mediterranean, temperate and boreal biogeographic regions. It includes scattered tree data from other continents, totaling over 20,000 trees of 33 species and covering a wide range of tree sizes and forms. Alongside the release of FOR‐species20K, we benchmarked seven leading DL models for individual tree species classification, including both point cloud (PointNet++, MinkNet, MLP‐Mixer, DGCNNs) and multi‐view 2D‐based methods (SimpleView, DetailView, YOLOv5). 2D Image‐based models had, on average, higher overall accuracy (0.77) than 3D point cloud‐based models (0.72). Notably, the performance was consistently >0.8 across scanning platforms and sensors, offering versatility in deployment. The top‐scoring model, DetailView, demonstrated robustness to training data imbalances and effectively generalized across tree sizes. The FOR‐species20K dataset represents an important asset for developing and benchmarking DL models for individual tree species classification using proximally sensed laser scanning data. As such, it serves as a crucial foundation for future efforts to classify accurately and map tree species at various scales using laser scanning technology, as it provides the complete code base, dataset, and an initial baseline representative of the current state‐of‐the‐art of point cloud tree species classification methods.

2 December 2022 in Remote Sensing
Verified
Journal Article
Open access
PDF file
ZXZhouxin Xi
Zhouxin Xi
CHChris Hopkinson
Chris Hopkinson
Using terrestrial laser scanning (TLS) technology, forests can be digitized at the centimeter-level to enable fine-scale forest management. However, there are technical barriers to converting point clouds into individual-tree features or objects aligned with forest inventory standards due to noise, redundancy, and geometric complexity. A practical model treeiso based on the cut-pursuit graph algorithm was proposed to isolate individual-tree points from plot-level TLS scans. The treeiso followed the local-to-global segmentation scheme, which grouped points into small clusters, large segments, and final trees in a hierarchical manner. Seven tree attributes were investigated to understand the underlying determinants of isolation accuracy. Sensitivity analysis based on the PAWN index was performed using 10,000 parameter combinations to understand the treeiso’s parameter importance and model robustness. With sixteen reference TLS plot scans from various species, an average of 86% of all trees were detected. The mean intersection-over-union (mIoU) between isolated trees and reference trees was 0.82, which increased to 0.92 within the detected trees. Sensitivity analysis showed that only three parameters were needed for treeiso optimization, and it was robust against parameter variations. This new treeiso method is operationally simple and addresses the growing need for practical 3D tree segmentation tools.