Liming (L) is a common practice to mitigate soil acidification and enhance soil quality and crop productivity. However, in acidic soil, it is not clear how long-term application of lime and nitrogen (N)-based fertilizer affects soil chemical properties, the wheat and maize grain yields (GY), and N-use efficiency (NUE). Thus, to investigate the effects of N-based fertilizations without L (−L) and with L (+L) on wheat and maize GY and NUE through their effects on soil chemical properties, we analyzed a 28-year field experiment in acidic soil under a wheat-maize system in South China. The analysis was carried out between 1991 and 2010 (before L) and between 2011 and 2018 (after L). We categorized the treatments into (1) no fertilizer (C); nitrogen (N); N and phosphorus (NP); N and potassium (NK); N, P and K (NPK); and NPKC_R, NPK and crops residue (C_R) applications (NPKC_R), before L; and (2) C; N−L; N+L; NP−L; NP+L; NK−L; NK+L; NPK−L; NPK+L; NPKC_R−L and NPKC_R+L, after L. The effects of long-term fertilization resulted in lower soil pH by 15%, soil available K (AK) by 19%, P_Olsen by 6%, NO₃⁻-N by 15%, soil organic matter (SOM) by 16%, total N by 16%, and C:N ratio by 13% in −L soil than in +L soil. However, the accumulation of NH₄⁺-N was higher by 40% in −L soil than in +L soil. Wheat and maize GY, N recovery efficiency (RE_N), and N partial factor productivity (PEP_N) were more adversely affected by 8-year fertilizations in −L compared with fertilizations before L and in +L primarily because of the significantly decreased soil pH. Conversely, improvements in wheat and maize yields, RE_N, and PFP_N by 8-year fertilizations in +L were related to increasing soil pH, exchangeable base cations such as Ca²⁺, Mg²⁺, and the alleviated toxicity of Al³⁺. Overall, improvement of GY and NUE from the acidified soil in South China requires the long-term integrated use of fertilizer (NPK), retention of C_R, and the +L (i.e., NPKC_R+L).

A long-term experiment (38 years) was conducted to elucidate the effects of long-term N addition on the net N mineralization in both paddy and upland soils, based on their initial soil N status, with and in connection with soil microbial biomass and N cycling extracellular enzyme activities. Two treatments without N addition CK (No fertilizer) and K (inorganic potassium fertilizer) and two treatments with N addition (inorganic nitrogen fertilizer) and NK (inorganic nitrogen and potassium fertilizer) were placed in incubation for 90 days. Results showed that the total N and soil organic carbon (SOC) contents were higher in the treatments with N application compared to the treatments without N in both paddy and upland soils. The SOC content of paddy soil was increased relative to upland soil by 56.2%, 45.7%, 61.1% and 62.2% without N (CK, K) and with N (N and NK) treatments, respectively. Site-wise, total N concentration in paddy soil was higher by 0.06, 0.10, 0.57 and 0.60 times under the CK, K, N and NK treatments, respectively, compared with upland soil. In paddy soil, soil microbial biomass nitrogen (SMBN) was higher by 39.6%, 2.77%, 29.5% and 31.4%, and microbial biomass carbon (SMBC) was higher by 11.8%, 11.9%, 10.1% and 12.3%, respectively, in CK, K, N and NK treatment, compared with upland soil. Overall, compared to upland soil, the activities of leucine-aminopeptidase (LAP) were increased by 31%, 18%, 20% and 11%, and those of N-acetyl-b-D-glucosaminidase (NAG) were increased by 70%, 21%, 13% and 18% by CK, K, N and NK treatments, respectively, in paddy soil. A significantly linear increase was found in the NO₃⁻-N and NH₄⁺-N concentrations during the 90 days of the incubation period in both soils. NK treatment showed the highest N mineralization potential (N_o) along with mineralization rate constant, k (NMR) at the end of the incubation. SMBC, SMBN, enzyme activities, NO₃⁻-N and NH₄⁺-N concentrations and the N_o showed a highly significant (p ≤ 0.05) positive correlation. We concluded that long-term N addition accelerated the net mineralization by increasing soil microbial activities under both soils.

A long-term field experiment was carried out (since 2008) for evaluating the effects of different substitution rates of inorganic nitrogen (N) fertilizer by green manure (GM) on yield stability and N balance under double rice cropping system. Treatments included, (1) N₀ (no N fertilizer and no green manure); (2) N₁₀₀ (recommended rate of N fertilizer and no green manure); (3) N₁₀₀-M (recommended rate of N fertilizer and green manure); (4) N₈₀-M (80% of recommended N fertilizer and green manure); (5) N₆₀-M (60% of recommended N fertilizer and green manure); and (6) M (green manure without N fertilization). Results showed that, among all treatments, annual crop yield under N₈₀-M treatment was highest. Crop yield did not show significant differences between N₁₀₀-M and N₈₀-M treatments. Substitution of different N fertilizer rates by GM reduced the yield variability index. Compared to the N₀ treatment, yield variability index of early rice under N₁₀₀-M, N₈₀-M, and N₆₀-M treatments was decreased by 11%, 26%, and 36%, respectively. Compared to the N₀ treatment, yield variability index of late rice was decreased by 12%, 38%, 49%, 47%, and 24% under the N₁₀₀, N₁₀₀-M, N₈₀-M, N₆₀-M, and M treatments, respectively. During period of 2009–2013 and 2014–2018, nitrogen recovery efficiency (NRE) was highest under N₈₀-M treatment and N balance was highest under N₁₀₀ treatment. NRE of all treatments with GM was increased over the time from 2009–2013 to 2014–2018. All treatments with GM showed increasing trend of SOC over the years. Substitution of N fertilizer by GM also increased C inputs and soil C:N ratio compared to the N₁₀₀ and N₀ treatments. Boosted regression model indicated that C input, N uptake and AN were most influencing factors of crop yield. Thus, we concluded that N fertilization rates should be reduced by 20% under GM rotation to attain high yield stability of double rice cropping system through increasing NRE and C inputs.

Cultivation of green manure (GM) crops in intensive cropping systems is important for enhancing crop productivity through soil quality improvement. We investigated yield sustainability, nutrient stocks, nutrient balances and enzyme activities affected by different long-term (1982–2016) green manure rotations in acidic paddy soil in a double-rice cropping system. We selected four treatments from a long-term experiment, including (1) rice-rice-winter fallow as a control treatment (R-R-F), (2) rice-rice-milkvetch (R-R-M), (3) rice-rice-rapeseed (R-R-R), and (4) rice-rice-ryegrass (R-R-G). The results showed that different GM rotations increased grain yield and the sustainable yield index compared with those of the R-R-F treatment. Compared with those of R-R-F, the average grain yield of early rice in R-R-M, R-R-R, and R-R-G increased by 45%, 29%, and 27%, respectively and that of late rice increased by 46%, 28%, and 26%, respectively. Over the years, grain yield increased in all treatments except R-R-F. Green manure also improved the soil chemical properties (SOM and total and available N and P), except soil pH, compared to those of the control treatment. During the 1983–1990 cultivation period, the soil pH of the R-R-M treatment was lower than that of the R-R-F treatment. The addition of green manure did not mitigate the soil acidification caused by the use of inorganic fertilizers. The soil organic matter (SOM), total nitrogen (TN) and total phosphorus (TP) contents and stocks of C, N and P increased over the years. Furthermore, GM significantly increased phosphatase and urease activities and decreased the apparent N and P balances compared with those in the winter fallow treatment. Variance partitioning analysis revealed that soil properties, cropping systems, and climatic factors significantly influenced annual grain yield. Aggregated boosted tree (ABT) analysis quantified the relative influences of the different soil properties on annual grain yield and showed that the relative influences of TN content, SOM, pH, and TP content on annual crop yield were 27.8%, 25.7%, 22.9%, and 20.7%, respectively. In conclusion, GM rotation is beneficial for sustaining high crop yields by improving soil biochemical properties and reducing N and P balances in acidic soil under double- rice cropping systems.

Elevated mineral fertilization may change the composition and increase the availability of soil phosphorus (P) in subtropical paddy soils and thus affect long-term plant growth. However, an understanding of the response of soil P fractions to long-term nitrogen, phosphorus and potassium (NPK) additions remains elusive. This study aimed to explore the responses of soil P-fractions and their mobility to different long-term chemical fertilization rates under a double rice cropping system. The rates of nitrogen (N), phosphorus (P), and potassium (K) in the low NPK treatment (LNPK) were 90, 45, and 75 kg ha⁻¹ year⁻¹, respectively, and in the high NPK treatment (HNPK), they were 180, 90, and 150 kg ha⁻¹ year⁻¹, respectively. The results showed that the concentrations of soil organic matter (SOM), total P, Olsen P, total N, and mineral N were remarkably increased under HNPK by 17.46%, 162.66%, 721.16%, 104.42%, and 414.46%, respectively, compared with those under control (CT). Compared to the CT P fractions, HNPK increased the labile P fractions (i.e., NaHCO₃-Pi and NaHCO₃-Po) by 322.25% and 83.53% and the moderately labile P fractions (i.e., NaOH-Pi, NaOH-Po and HCl. dil. Pi) by 163.54%, 183.78%, and 3167.25% respectively, while the non-labile P was decreased by the HNPK addition. P uptake and grain yield were increased by LNPK and HNPK by 10.02% and 35.20%, respectively, compared with CT. P use efficiency indices were also higher under HNPK than under LNPK. There was a strong positive relationship between grain yield and P use efficiency (R² = 0.97). A redundancy analysis (RDA) showed a strong correlation between soil chemical properties and the labile and moderately labile P pools. Structural equation modeling (SEM) revealed that SOM, mineral N, and available P strongly control the labile P pool. In conclusion, NPK additions under the paddy soils significantly influences the soil P fractions. The soil P dynamics and the mechanisms governing the interactions between plants and soil nutrients are clearly explained in this study.

The excessive use of chemical phosphorus (P) fertilizer can lower grain yield and P use efficiency (PUE) by aggravating soil acidity. Substituting organic manure for chemical fertilizer can alleviate the problem, although the long-term effect of organic manure incorporation is unknown. We conceptualized that substituting organic manure for chemical fertilizer may result in higher crop yields and PUE. Therefore, the impact of long-term fertilizer treatments: (i) CK (control), (ii) PK (phosphorus and potassium fertilizer), (iii) NP (nitrogen and P fertilizer), (iv) NK fertilizer, (v) NPK fertilizer, and (vi) NPKM (30% NPK fertilizer plus 70% manure) on rice yield, PUE, P uptake, and apparent balance (APB) was investigated. The results showed that rice yield under different fertilizer treatments ranged from 6.2 to 11.8 t ha⁻¹ (1984–1995), 7.9 to 12.7 t ha⁻¹ (1996–2007), and 6.6 to 12.8 t ha⁻¹ (2008–2018). The rice yield under NPKM was greatly improved compared to other treatments, except with that of NPK (1984–1995). Soil organic carbon (SOC), available P and phosphorus activation coefficient (PAC) under NPKM were significantly higher than other treatments during 1984–2018. Soil pH (1984–2018) was greatly higher under CK and NPKM than under other treatments. Soil total P under PK, NP, NPK, and NPKM was significantly higher than under CK and NK (1984–2018). Compared to other treatments, P uptake was significantly higher under NPKM, except with that of NPK (1984–1995 and 2008–2018). The average PUE (1984–2018) was 10.7, 20.2, 36.1, and 44.2 kg kg⁻¹ under PK, NP, NPK, and NPKM, respectively. The APB under NPKM was significantly lower as compared to PK, NP, and NPK treatments. Therefore, we conclude that in addition to improving soil organic carbon, cations inputs from organic manure can be a factor for the increase in soil pH, making organic manure substitution for chemical fertilizer a more efficient strategy for increasing PUE and crop yield.