Huseyin Cagatay Yalcin

Prof. Huseyin Cagatay Yalcin

Qatar University, Doha, Ad Dawḩah, Qatar
orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 September 2018 in BioMed Research International
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Journal Article
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Zain Z ZakariaZain Z Zakaria
Zain Z Zakaria
FBFatiha Benslimane
Fatiha Benslimane
Gheyath NasrallahGheyath Nasrallah
Gheyath Nasrallah
SSSamar Shurbaji
Samar Shurbaji
NYNadin Younes
Nadin Younes
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin
Over the last decade, the zebrafish (Danio rerio) has emerged as a model organism for cardiovascular research. Zebrafish have several advantages over mammalian models. For instance, the experimental cost of using zebrafish is comparatively low; the embryos are transparent, develop externally, and have high fecundity making them suitable for large-scale genetic screening. More recently, zebrafish embryos have been used for the screening of a variety of toxic agents, particularly for cardiotoxicity testing. Zebrafish has been shown to exhibit physiological responses that are similar to mammals after exposure to medicinal drugs including xenobiotics, hormones, cancer drugs, and also environmental pollutants, including pesticides and heavy metals. In this review, we provided a summary for recent studies that have used zebrafish to investigate the molecular mechanisms of drug-induced cardiotoxicity. More specifically, we focused on the techniques that were exploited by us and others for cardiovascular toxicity assessment and described several microscopic imaging and analysis protocols that are being used for the estimation of a variety of cardiac hemodynamic parameters.

23 January 2023 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
OMOnur HEALTH & SCIENCE Mutlu
Onur HEALTH & SCIENCE Mutlu
HSHuseyin Enes Salman
Huseyin Enes Salman
HAHassan Al-Thani
Hassan Al-Thani
Ayman El-MenyarAyman El-Menyar
Ayman El-Menyar
UQUvais Ahmed Qidwai
Uvais Ahmed Qidwai
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin

31 May 2019 in Frontiers in Bioengineering and Biotechnology
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HSHuseyin Enes Salman
Huseyin Enes Salman
BRBurcu Ramazanli
Burcu Ramazanli
MYMehmet Metin Yavuz
Mehmet Metin Yavuz
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin
Abdominal aortic aneurysm (AAA) is the dilatation of the aorta beyond 50% of the normal vessel diameter. It is reported that 4–8% of men and 0.5–1% of women above 50 years of age bear an AAA and it accounts for ~15,000 deaths per year in the United States alone. If left untreated, AAA might gradually expand until rupture; the most catastrophic complication of the aneurysmal disease that is accompanied by a striking overall mortality of 80%. The precise mechanisms leading to AAA rupture remains unclear. Therefore, characterization of disturbed hemodynamics within AAAs will help to understand the mechanobiological development of the condition which will contribute to novel therapies for the condition. Due to geometrical complexities, it is challenging to directly quantify disturbed flows for AAAs clinically. Two other approaches for this investigation are computational modeling and experimental flow measurement. In computational modeling, the problem is first defined mathematically, and the solution is approximated with numerical techniques to get characteristics of flow. In experimental flow measurement, once the setup providing physiological flow pattern in a phantom geometry is constructed, velocity measurement system such as particle image velocimetry (PIV) enables characterization of the flow. We witness increasing number of applications of these complimentary approaches for AAA investigations in recent years. In this paper, we outline the details of computational modeling procedures and experimental settings and summarize important findings from recent studies, which will help researchers for AAA investigations and rupture mechanics.

5 July 2024 in Biomimetics
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BÇBilal Çinici
Bilal Çinici
SYSule Yaba
Sule Yaba
MKMustafa Kurt
Mustafa Kurt
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin
Liviu DutaLiviu Duta
Liviu Duta
Oguzhan GunduzOguzhan Gunduz
Oguzhan Gunduz
The aim of this study is to provide an overview of the current state-of-the-art in the fabrication of bioceramic scaffolds for bone tissue engineering, with an emphasis on the use of three-dimensional (3D) technologies coupled with generative design principles. The field of modern medicine has witnessed remarkable advancements and continuous innovation in recent decades, driven by a relentless desire to improve patient outcomes and quality of life. Central to this progress is the field of tissue engineering, which holds immense promise for regenerative medicine applications. Scaffolds are integral to tissue engineering and serve as 3D frameworks that support cell attachment, proliferation, and differentiation. A wide array of materials has been explored for the fabrication of scaffolds, including bioceramics (i.e., hydroxyapatite, beta-tricalcium phosphate, bioglasses) and bioceramic–polymer composites, each offering unique properties and functionalities tailored to specific applications. Several fabrication methods, such as thermal-induced phase separation, electrospinning, freeze-drying, gas foaming, particle leaching/solvent casting, fused deposition modeling, 3D printing, stereolithography and selective laser sintering, will be introduced and thoroughly analyzed and discussed from the point of view of their unique characteristics, which have proven invaluable for obtaining bioceramic scaffolds. Moreover, by highlighting the important role of generative design in scaffold optimization, this review seeks to pave the way for the development of innovative strategies and personalized solutions to address significant gaps in the current literature, mainly related to complex bone defects in bone tissue engineering.

1 September 2020 in Micron
Verified
Journal Article
Closed access
FBFatiha Benslimane
Fatiha Benslimane
Zain Z ZakariaZain Z Zakaria
Zain Z Zakaria
SSSamar Shurbaji
Samar Shurbaji
MAMahmoud Al-Ruweidi
Mahmoud Al-Ruweidi
MAMashael Ali H.I. Al-Badr
Mashael Ali H.I. Al-Badr
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin

Verified
Journal Article
Open access
PDF file
HSHuseyin Enes Salman
Huseyin Enes Salman
Huseyin Cagatay YalcinHuseyin Cagatay Yalcin
Huseyin Cagatay Yalcin
The heart is the first functional organ in a developing embryo. Cardiac development continues throughout developmental stages while the heart goes through a serious of drastic morphological changes. Previous animal experiments as well as clinical observations showed that disturbed hemodynamics interfere with the development of the heart and leads to the formation of a variety of defects in heart valves, heart chambers, and blood vessels, suggesting that hemodynamics is a governing factor for cardiogenesis, and disturbed hemodynamics is an important source of congenital heart defects. Therefore, there is an interest to image and quantify the flowing blood through a developing heart. Flow measurement in embryonic fetal heart can be performed using advanced techniques such as magnetic resonance imaging (MRI) or echocardiography. Computational fluid dynamics (CFD) modeling is another approach especially useful when the other imaging modalities are not available and in-depth flow assessment is needed. The approach is based on numerically solving relevant physical equations to approximate the flow hemodynamics and tissue behavior. This approach is becoming widely adapted to simulate cardiac flows during the embryonic development. While there are few studies for human fetal cardiac flows, many groups used zebrafish and chicken embryos as useful models for elucidating normal and diseased cardiogenesis. In this paper, we explain the major steps to generate CFD models for simulating cardiac hemodynamics in vivo and summarize the latest findings on chicken and zebrafish embryos as well as human fetal hearts.