Mohamed Arselene Ayari

Dr. Mohamed Arselene Ayari

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2020 in IEEE Access
Verified
Journal Article
Open access
Tawsifur RahmanTawsifur Rahman
Tawsifur Rahman
AKAmith Khandakar
Amith Khandakar
MKMuhammad Abdul Kadir
Muhammad Abdul Kadir
KIKhandaker Reajul Islam
Khandaker Reajul Islam
KIKhandakar F. Islam
Khandakar F. Islam
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
Tuberculosis (TB) is a chronic lung disease that occurs due to bacterial infection and is one of the top 10 leading causes of death. Accurate and early detection of TB is very important, otherwise, it could be life-threatening. In this work, we have detected TB reliably from the chest X-ray images using image pre-processing, data augmentation, image segmentation, and deep-learning classification techniques. Several public databases were used to create a database of 3500 TB infected and 3500 normal chest X-ray images for this study. Nine different deep CNNs (ResNet18, ResNet50, ResNet101, ChexNet, InceptionV3, Vgg19, DenseNet201, SqueezeNet, and MobileNet) were used for transfer learning from their pre-trained initial weights and were trained, validated and tested for classifying TB and non-TB normal cases. Three different experiments were carried out in this work: segmentation of X-ray images using two different U-net models, classification using X-ray images and that using segmented lung images. The accuracy, precision, sensitivity, F1-score and specificity of best performing model, ChexNet in the detection of tuberculosis using X-ray images were 96.47%, 96.62%, 96.47%, 96.47%, and 96.51% respectively. However, classification using segmented lung images outperformed that with whole X-ray images; the accuracy, precision, sensitivity, F1-score and specificity of DenseNet201 were 98.6%, 98.57%, 98.56%, 98.56%, and 98.54% respectively for the segmented lung images. The paper also used a visualization technique to confirm that CNN learns dominantly from the segmented lung regions that resulted in higher detection accuracy. The proposed method with state-of-the-art performance can be useful in the computer-aided faster diagnosis of tuberculosis.

20 May 2021 in Agriengineering
Verified
Journal Article
Open access
PDF file
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
Tawsifur RahmanTawsifur Rahman
Tawsifur Rahman
AKAmith Khandakar
Amith Khandakar
MAMohamed Arselene Ayari
Mohamed Arselene Ayari
AKAftab Khan
Aftab Khan
SASawal Hamid Md Ali
Sawal Hamid Md Ali
Plants are a major source of food for the world population. Plant diseases contribute to production loss, which can be tackled with continuous monitoring. Manual plant disease monitoring is both laborious and error-prone. Early detection of plant diseases using computer vision and artificial intelligence (AI) can help to reduce the adverse effects of diseases and also overcome the shortcomings of continuous human monitoring. In this work, we propose the use of a deep learning architecture based on a recent convolutional neural network called EfficientNet on 18,161 plain and segmented tomato leaf images to classify tomato diseases. The performance of two segmentation models i.e., U-net and Modified U-net, for the segmentation of leaves is reported. The comparative performance of the models for binary classification (healthy and unhealthy leaves), six-class classification (healthy and various groups of diseased leaves), and ten-class classification (healthy and various types of unhealthy leaves) are also reported. The modified U-net segmentation model showed accuracy, IoU, and Dice score of 98.66%, 98.5%, and 98.73%, respectively, for the segmentation of leaf images. EfficientNet-B7 showed superior performance for the binary classification and six-class classification using segmented images with an accuracy of 99.95% and 99.12%, respectively. Finally, EfficientNet-B4 achieved an accuracy of 99.89% for ten-class classification using segmented images. It can be concluded that all the architectures performed better in classifying the diseases when trained with deeper networks on segmented images. The performance of each of the experimental studies reported in this work outperforms the existing literature.

30 May 2022 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
SGSidra Gul
Sidra Gul
MKMuhammad Salman Khan
Muhammad Salman Khan
ABAsima Bibi
Asima Bibi
AKAmith Khandakar
Amith Khandakar
MAMohamed Arselene Ayari
Mohamed Arselene Ayari
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury

20 February 2022 in Sustainable Production and Consumption
Verified
Journal Article
Closed access
MAMuna Al-Obadi
Muna Al-Obadi
HAHiba Ayad
Hiba Ayad
Shaligram PokharelShaligram Pokharel
Shaligram Pokharel
MAMohamed Arselene Ayari
Mohamed Arselene Ayari

15 November 2022 in Bioengineering
Verified
Journal Article
Open access
PDF file
NINabil Ibtehaz
Nabil Ibtehaz
Sakib MahmudSakib Mahmud
Sakib Mahmud
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
AKAmith Khandakar
Amith Khandakar
MKMuhammad Salman Khan
Muhammad Salman Khan
MRM. Sohel Rahman
M. Sohel Rahman
Cardiovascular diseases are one of the most severe causes of mortality, annually taking a heavy toll on lives worldwide. Continuous monitoring of blood pressure seems to be the most viable option, but this demands an invasive process, introducing several layers of complexities and reliability concerns due to non-invasive techniques not being accurate. This motivates us to develop a method to estimate the continuous arterial blood pressure (ABP) waveform through a non-invasive approach using Photoplethysmogram (PPG) signals. We explore the advantage of deep learning, as it would free us from sticking to ideally shaped PPG signals only by making handcrafted feature computation irrelevant, which is a shortcoming of the existing approaches. Thus, we present PPG2ABP, a two-stage cascaded deep learning-based method that manages to estimate the continuous ABP waveform from the input PPG signal with a mean absolute error of 4.604 mmHg, preserving the shape, magnitude, and phase in unison. However, the more astounding success of PPG2ABP turns out to be that the computed values of Diastolic Blood Pressure (DBP), Mean Arterial Pressure (MAP), and Systolic Blood Pressure (SBP) from the estimated ABP waveform outperform the existing works under several metrics (mean absolute error of 3.449 ± 6.147 mmHg, 2.310 ± 4.437 mmHg, and 5.727 ± 9.162 mmHg, respectively), despite that PPG2ABP is not explicitly trained to do so. Notably, both for DBP and MAP, we achieve Grade A in the BHS (British Hypertension Society) Standard and satisfy the AAMI (Association for the Advancement of Medical Instrumentation) standard.

17 May 2021 in Diagnostics
Verified
Journal Article
Open access
PDF file
YQYazan Qiblawey
Yazan Qiblawey
ATAnas Tahir
Anas Tahir
Muhammad E. H. ChowdhuryMuhammad E. H. Chowdhury
Muhammad E. H. Chowdhury
AKAmith Khandakar
Amith Khandakar
Serkan KiranyazSerkan Kiranyaz
Serkan Kiranyaz
MAMohamed Arselene Ayari
Mohamed Arselene Ayari
Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. In this study, a cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images. An extensive set of experiments were performed using Encoder–Decoder Convolutional Neural Networks (ED-CNNs), UNet, and Feature Pyramid Network (FPN), with different backbone (encoder) structures using the variants of DenseNet and ResNet. The conducted experiments for lung region segmentation showed a Dice Similarity Coefficient (DSC) of 97.19% and Intersection over Union (IoU) of 95.10% using U-Net model with the DenseNet 161 encoder. Furthermore, the proposed system achieved an elegant performance for COVID-19 infection segmentation with a DSC of 94.13% and IoU of 91.85% using the FPN with DenseNet201 encoder. The proposed system can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. Moreover, the proposed system achieved high COVID-19 detection performance with 99.64% sensitivity and 98.72% specificity. Finally, the system was able to discriminate between different severity levels of COVID-19 infection over a dataset of 1110 subjects with sensitivity values of 98.3%, 71.2%, 77.8%, and 100% for mild, moderate, severe, and critical, respectively.