The utilization of heterosis has resulted in significant breakthroughs in rice breeding. However, the development of hybrid japonica has been slow in comparison with that of hybrid indica. The present review explores the history and current status of hybrid japonica breeding. With the creation of japonica cytoplasmic male sterility and photo-thermo-sensitive genic male sterile lines, both three-line and two-line systems of hybrid rice have been created, and a series of hybrid japonica rice varieties have been developed and cultivated widely. At the same time, some progress has been made in genetic research of molecular mechanism for heterosis and QTL mapping for traits such as fertility, stigma exposure and flower time. In addition, genomics and transcriptome have been widely used in the research of hybrid rice, which provides a strong support for its development. Although the research on hybrid japonica has made many advances, there are still some restrictive problems. Based on the research and production of hybrid japonica rice, the prospect and development strategies of hybrid japonica rice are analyzed.

A comprehensive understanding of rice cultivation techniques and organic amendments affecting soil quality, enzyme activities and bacterial community structure is crucial. We investigated two planting methods (direct seeding and transplanting) of paddy rice (Oryza sativa) and organic amendments with rice straw and biochar on crop yield and soil biological and physicochemical properties. Rhizosphere bacterial communities at the maturity stage of rice growth were characterized through high-throughput 16S rRNA sequencing. Soil biochemical properties and enzyme activity levels were analyzed. Grain yield of paddy rice with transplanting increased 10.6% more than that with direct seeding. The application of rice straw increased grain yield by 7.1 and 8.2%, more than with biochar and the control, respectively. Compared to biochar and the control, the application of rice straw significantly increased sucrase, cellulase, protease, organic carbon, available phosphorus, nitrate, and ammonium. The application of biochar increased microbial biomass nitrogen and carbon, urease, pH, available nitrogen, and available potassium compared to the application of rice straw and the control. Principal coordinate analysis and dissimilarity distances confirmed significant differences among the microbial communities associated with planting methods and organic amendments. Bacteroidetes, Nitrospirae, Firmicutes, and Gemmatimonadetes abundance increased with rice straw relative to biochar and the control. The biochar addition was associated with significant increases in Chloroflexi, Patescibacteria, Proteobacteria, and Actinobacteria abundance. Pearson’s correlation analyzes showed that Chloroflexi, Bacteroidetes and Nitrospirae abundance was positively correlated with grain yield. The relative abundance of these bacteria in soil may be beneficial for improving grain yield. These results suggest that planting methods and organic amendments impact soil biochemical characteristics, enzyme activity levels, and microbial community composition.

Dry direct seeding rice (DSR) is an emerging production system because of increasing labor and water scarcity in rice cultivation. The limited availability of rice cultivars suitable for dry direct seeding hampers the widespread adoption of this cultivation method in Northeast China. This study aimed to investigate grain production and plant characteristics associated with dry direct seeding rice. We conducted a field experiment on 79 japonica rice cultivars in Shenyang City, Liaoning Province, Northeast China, in 2020 and 2021. This study found that the grain yield of the tested rice cultivars ranged from 5.75–11.00 t ha⁻¹, with a growth duration lasting between 144–161 days across the cultivars. These cultivars were then categorized into high yielding (HY), medium yielding (MY), and low yielding (LY) based on daily yield by using Ward’s hierarchical clustering method. The higher grain yield for HY compared to MY and LY was attributed to more spikelets per unit area. The HY alleviated the conflict between higher panicle density and larger panicle size by improving the seedling emergence rate and productive stem rate. It also significantly increased shoot biomass at maturity. The HY reduced the period between seeding and beginning of heading (BBCH 51) and the proportion of dry matter partitioned to the leaf at the heading stage. However, it also increased the accumulation of dry matter in the grain and the proportion of dry matter partitioned to the grain at maturity. Furthermore, the HY markedly increased the harvest index and grain-leaf ratio, which are beneficial to coordinate the source–sink relationship. A quadratic function predicted that 98 days is the optimum growth duration before heading (BBCH 51) for achieving maximum yield. In conclusion, for dry direct seeding rice, it is appropriate to select high-yielding japonica inbred rice cultivars with shorter growth duration before heading (about 93–102 day), higher panicle number (about 450–500 × 10⁴ ha^–1), more spikelet number per panicle (about 110–130), higher seedling emergence rate (about 70–75%), higher productive stem rate (about 60–70%), and greater harvest index (about 50–55%).

The research on rice lodging resistance holds immeasurable value for achieving high yield, stable production, and superior quality of rice. To investigate the effects of mechanical properties and physicochemical characteristics of Japonica hybrid rice on its lodging resistance ability under natural field cultivation conditions, LY1052, LY9906, and GY1, which were mainly popularized in northern China, were selected as the experimental subjects, and NL313, Japonica hybrid rice prone to lodging, was taken as the control (NL313).The max bending force, breaking moment, bending section coefficient, single stem weight mass moment, bending strength, Young’s elastic modulus, inertia moment, and other mechanical indexes were measured by the bending test and tensile test, and the correlations between mechanical indexes, physicochemical indexes, and lodging index were studied. There was an extremely significant difference in the lodging index of experimental subjects and control (NL313) (p < 0.05). Therefore, it was concluded that the lower plant height and lighter panicle were not the stronger lodging resistance under appropriate cultivation conditions. Optimization of rice plant-type structure can achieve the unity of high culm and high yield. The lodging resistance of rice could be improved by shortening the internode length, increasing the tissue thickness and vascular bundle area, and increasing the content of cellulose and potassium in the stem. It was also found that the lodging resistance of rice plants was positively correlated with the maximum stem bending force, breaking moment, bending section coefficient, bending strength, and Young’s elastic modulus (p < 0.01) and negatively correlated with single stem weight mass moment and inertia moment (p < 0.01). It is feasible to select them as reference indexes of the lodging resistance of rice. The experimental results not only help to enrich the theoretical system of rice lodging resistance research but also provide an essential reference and basis for formulating scientific cultivation and management measures and breeding lodging-resistant rice varieties in practical production, which is of great significance for ensuring global food security and promoting sustainable agricultural development.

Heterosis is an interesting topic for both breeders and biologists due to its practical importance and scientific significance. Cultivated rice (Oryza sativa L.) consists of two subspecies, indica and japonica, and hybrid rice is the predominant form of indica rice in China. However, the molecular mechanism underlying heterosis in japonica remains unclear. The present study determined the genome sequence and conducted quantitative trait locus (QTL) analysis using backcross recombinant inbred lines (BILs) and BILF₁ lines to uncover the heterosis-related loci for rice yield increase under a japonica genetic background. The BIL population was derived from an admixture variety Habataki and japonica variety Sasanishiki cross to improve the genetic diversity but maintain the genetic background close to japonica. The results showed that heterosis in F₁ mainly involved grain number per panicle. The BILF₁s showed an increase in grain number per panicle but a decrease in plant height compared with the BILs. Genetic analysis then identified eight QTLs for heterosis in the BILF₁s; four QTLs were detected exclusively in the BILF₁ population only, presenting a mode of dominance or super-dominance in the heterozygotes. An additional four loci overlapped with QTLs detected in the BIL population, and we found that Grains Height Date 7 (Ghd7) was correlated in days to heading in both BILs and BILF₁s. The admixture genetic background of Habataki was also determined by subspecies-specific single nucleotide polymorphisms (SNPs). This investigation highlights the importance of high-throughput sequencing to elucidate the molecular mechanism of heterosis and provides useful germplasms for the application of heterosis in japonica rice production.

A comprehensive understanding of rice straw (RS) and biochar (BC) addition affecting soil quality, enzyme activities, bacterial community structure and grain yield is crucial. The objective of this study was to examine the dynamics of the soil microbial community impacted by the application of rice straw and biochar, and to understand the relationship between the microbial communities, soil enzymes, nutrients and grain yield of paddies. We conducted a field experiment with organic amendments under the direct seeding of paddies. The bacterial community structure in the rhizosphere was characterized using high-throughput 16S rRNA sequencing. The results showed that RS amendment increased grain yields by 8.5 and 9.9% more than with BC and the control without organic amendment (CK), respectively (p < 0.05). The abundance of bacteria associated with nitrate reduction in RS was higher than that in BC and CK, which further showed the significance of the RS-treated soil bacteria in rice nutrient utilization. A cladogram plotted using linear discriminant analysis effect size showed that Proteobacteria (Alphaproteobacteria), Acidobacteria, Firmicutes, Verrucomicrobia and Epsilonbacteraeota in the RS-treated soil increased in comparison with CK. Pearson’s correlation analysis showed that enzymes activities (cellulase activity and protease activity), soil nutrition content (soil hydrolyzable nitrogen), and bacterial phyla (Nitrospinae) were positively correlated with grain yield, suggesting that the RS-treated soil improved enzyme activities, soil nutrition content, and bacterial abundance, which in turn increased grain yield. The results indicated that RS-treated bacterial communities combined with soil enzymatic activities strengthen the transformation of nutrients, suggesting that the interactions play an important role in enhancing the grain yield of paddy rice. These results provide new insights and a theoretical basis for studying the changes in soil microbial communities with the application of RS and BC in Northeastern China.