Ender Yildirim

Dr. Ender Yildirim

orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2012 in Sensors and Actuators A: Physical
Verified
Journal Article
Closed access
EYEnder Yildirim
Ender Yildirim
MAM.A. Sahir Arıkan
M.A. Sahir Arıkan
HKHaluk Külah
Haluk Külah

1 September 2018 in Sensors and Actuators B: Chemical
Verified
Journal Article
Closed access
BGBelma Gjergjizi
Belma Gjergjizi
FÇFerah Çoğun
Ferah Çoğun
EYEnder Yildirim
Ender Yildirim
MEMerve Eryılmaz
Merve Eryılmaz
YSYeşim Selbes
Yeşim Selbes
UTUgur Tamer
Ugur Tamer

10 March 2017 in Materials and Manufacturing Processes
Verified
Journal Article
Closed access
FÇFerah Çoğun
Ferah Çoğun
EYEnder Yildirim
Ender Yildirim
MAM. A. Sahir Arikan
M. A. Sahir Arikan

17 June 2014 in Lab on a Chip
Verified
Journal Article
Closed access
PDF file
EYEnder Yildirim
Ender Yildirim
STSebastiaan J. Trietsch
Sebastiaan J. Trietsch
JJJos Joore
Jos Joore
ABAlbert van Den Berg
Albert van Den Berg
THThomas Hankemeier
Thomas Hankemeier
PVPaul Vulto
Paul Vulto
A microfluidic passive valving platform is introduced that has full control over the stability of each valve. The concept is based on phaseguides, which are small ridges at the bottom of a channel acting as pinning barriers. It is shown that the angle between the phaseguide and the channel sidewall is a measure of the stability of the phaseguide. The relationship between the phaseguide–wall angle and the stability is characterized numerically, analytically and experimentally. Liquid routing is enabled by using multiple phaseguide with different stability values. This is demonstrated by filling complex chamber matrices. As an ultimate demonstration of control, a 400-chamber network is used as a pixel array. It is the first time that differential stability is demonstrated in the realm of passive valving. It ultimately enables microfluidic devices for massive data generation in a low-cost disposable format.

17 September 2022 in Biosensors
Verified
Journal Article
Open access
PDF file
ÜDÜzeyir Dogan
Üzeyir Dogan
FSFerah Sucularli
Ferah Sucularli
EYEnder Yildirim
Ender Yildirim
DCDemet Cetin
Demet Cetin
ZSZekiye Suludere
Zekiye Suludere
UTUgur Tamer
Ugur Tamer
Pathogen detection is still a challenging issue for public health, especially in food products. A selective preconcentration step is also necessary if the target pathogen concentration is very low or if the sample volume is limited in the analysis. Plate counting (24–48 h) methods should be replaced by novel biosensor systems as an alternative reliable pathogen detection technique. The usage of a capillary-driven microfluidic chip is an alternative method for pathogen detection, with the combination of surface-enhanced Raman scattering (SERS) measurements. Here, we constructed microchambers with capillary microchannels to provide nanoparticle–pathogen transportation from one chamber to the other. Escherichia coli (E. coli) was selected as a model pathogen and specific antibody-modified magnetic nanoparticles (MNPs) as a capture probe in a complex milk matrix. MNPs that captured E. coli were transferred in a capillary-driven microfluidic chip consisting of four chambers, and 4-aminothiophenol (4-ATP)-labelled gold nanorods (Au NRs) were used as the Raman probe in the capillary-driven microfluidic chip. The MNPs provided immunomagnetic (IMS) separation and preconcentration of analytes from the sample matrix and then, 4-ATP-labelled Au NRs provided an SERS response by forming sandwich immunoassay structures in the last chamber of the capillary-driven microfluidic chip. The developed SERS-based method could detect 101–107 cfu/mL of E. coli with the total analysis time of less than 60 min. Selectivity of the developed method was also tested by using Salmonella enteritidis (S. enteritidis) and Staphylococcus aureus (S. aureus) as analytes, and very weak signals were observed.

25 April 2014 in Lab on a Chip
Verified
Journal Article
Open access
PDF file
CPChayakom Phurimsak
Chayakom Phurimsak
EYEnder Yildirim
Ender Yildirim
MTMark Tarn
Mark Tarn
STSebastiaan J. Trietsch
Sebastiaan J. Trietsch
THThomas Hankemeier
Thomas Hankemeier
PVPaul Vulto
Paul Vulto
We have developed a magnetic particle-based assay platform in which functionalised magnetic particles are transferred sequentially through laminated volumes of reagents and washing buffers. Lamination of aqueous liquids is achieved via the use of phaseguide technology; microstructures that control the advancing air–liquid interface of solutions as they enter a microfluidic chamber. This allows manual filling of the device, eliminating the need for external pumping systems, and preparation of the system requires only a few minutes. Here, we apply the platform to two on-chip strategies: (i) a one-step streptavidin–biotin binding assay, and (ii) a two-step C-reactive protein immunoassay. With these, we demonstrate how condensing multiple reaction and washing processes into a single step significantly reduces procedural times, with both assay procedures requiring less than 8 seconds.