Nan Shan

Dr. Nan Shan

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 February 2020 in Scientia Horticulturae
Verified
Journal Article
Closed access
ZGZengyu Gan
Zengyu Gan
NSNan Shan
Nan Shan
LFLiuying Fei
Liuying Fei
Chunpeng WanChunpeng Wan
Chunpeng Wan
JCJinyin Chen
Jinyin Chen

8 September 2018 in The Plant Journal
Verified
Journal Article
Open access
PDF file
XSXiaolei Sui
Xiaolei Sui
JNJing Nie
Jing Nie
XLXIN LI
XIN LI
MSMichael J. Scanlon
Michael J. Scanlon
Cankui ZhangCankui Zhang
Cankui Zhang
ZZZhenxian Zhang
Zhenxian Zhang
Summary: The phloem of the Cucurbitaceae has long been a subject of interest due to its complex nature and the economic importance of the family. As in a limited number of other families, cucurbit phloem is bicollateral, i.e. with sieve tubes on both sides of the xylem. To date little is known about the specialized functions of the internal phloem (IP) and external phloem (EP). Here, a combination of microscopy, fluorescent dye transport analysis, micro‐computed tomography, laser capture microdissection and RNA‐sequencing (RNA‐Seq) were used to study the functions of IP and EP in the vascular bundles (VBs) of cucumber fruit. There is one type of VB in the peduncle, but four in the fruit: peripheral (PeVB), main (MVB), carpel (CVB) and placental (PlVB). The VBs are bicollateral, except for the CVB and PlVB. Phloem mobile tracers and 14C applied to leaves are transported primarily in the EP, and to a lesser extent in the IP. RNA‐Seq data indicate preferential gene transcription in the IP related to differentiation/development, hormone transport, RNA or protein modification/processing/transport, and nitrogen compound metabolism and transport. The EP preferentially expresses genes for stimulus/stress, defense, ion transport and secondary metabolite biosynthesis. The MVB phloem is preferentially involved in photoassimilate transport, unloading and long‐distance signaling, while the PeVB plays a more substantial role in morphogenesis and/or development and defense response. CVB and PlVB transcripts are biased toward development of reproductive organs. These findings provide an integrated view of the differentiated structure and function of the vascular tissue in cucumber fruit.

1 August 2021 in Plant Science
Verified
Journal Article
Closed access
ZGZengyu Gan
Zengyu Gan
XYXin Yuan
Xin Yuan
NSNan Shan
Nan Shan
Chunpeng WanChunpeng Wan
Chunpeng Wan
CCChuying Chen
Chuying Chen
JCJinyin Chen
Jinyin Chen

5 March 2020 in Foods
Verified
Journal Article
Open access
PDF file
NSNan Shan
Nan Shan
ZGZengyu Gan
Zengyu Gan
JNJing Nie
Jing Nie
HLHuan Liu
Huan Liu
ZWZhenyu Wang
Zhenyu Wang
XSXiaolei Sui
Xiaolei Sui
Bagging is widely practiced to produce high quality and unblemished fruit; however, little is currently known about the effect of bagging on flavor and nutritional quality of cucumber fruits. Here we determined the influence of bagging on fruit quality of cucumber (Cucumis sativus L.) using three genotypes from different geographic groups. Exocarp chlorophyll and carotenoid levels were significantly decreased by bagging, accompanied by color change. Ascorbate content in bagged fruits decreased to some extent, while contents of soluble sugars, starch, and cellulose were comparable with those of control fruits. Compositions related to fruit flavor quality could be enhanced largely through bagging treatment, with elevation of the relative proportion of C6 aldehyde, as well as (E,Z)-2,6-nonadienal/(E)-2-nonenal ratio, and linoleic/α-linolenic acid ratio. Lipoxygenase and hydroperoxide lyase, two key enzymes in the production of volatiles, displayed distinctive transcript expression patterns and trends in changes of enzymatic activity in the bagged fruits of different genotypes. Overall, this study assesses the information on changing characteristics of fruit volatile composition and nutritional quality among different cucumber genotypes after bagging treatment. Results of this study would contribute to providing reference for mechanism study and cultivation conditions to improve cucumber fruit flavor to a considerable degree.

18 February 2021 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
JNJing Nie
Jing Nie
NSNan Shan
Nan Shan
HLHuan Liu
Huan Liu
XYXuehui Yao
Xuehui Yao
ZWZiwei Wang
Ziwei Wang
XSXiaolei Sui
Xiaolei Sui
Significance: Auxin is a key phytohormone influencing multiple aspects of plant development, including meristem maintenance, primordia initiation, floral organogenesis, and vascular differentiation. Local auxin biosynthesis and polar auxin transport are essential to establish and maintain auxin gradients that ensure proper plant development. Here, we demonstrate that CsDFB1, a member of the plant cystatin superfamily, which was previously implicated in defense responses, plays a critical role in regulating local auxin distribution and thus influences floral organogenesis in cucumber. Genetic and biochemical assays suggest that CsDFB1 affects local auxin distribution by acting as an attenuator that interacts with CsPHB and modulates CsPHB-mediated transcriptional control of CsYUC2 and CsPIN1 . Our results shed light on the fine tuning of local auxin distribution in plants.

6 November 2019 in Plants
Verified
Journal Article
Open access
PDF file
ZGZengyu Gan
Zengyu Gan
FLfei liuying
fei liuying
NSNan Shan
Nan Shan
YFYongqi Fu
Yongqi Fu
JCJinyin Chen
Jinyin Chen
In plants, the Gretchen GH3 (GH3) protein is involved in free auxin (IAA) and amino acid conjugation, thus controlling auxin homeostasis. To date, many GH3 gene families have been identified from different plant species. However, the GH3 gene family in kiwifruit (Actinidia chinensis) has not been reported. In this study, 12 AcGH3 genes were identified, phylogenetic analysis of AtGH3 (Arabidopsis), SlGH3 (Solanum lycopersicum), and AcGH3 provided insights into various orthologous relationships among these proteins, which were categorized into three groups. Expression analysis of AcGH3 genes at different postharvest stages suggested limited or no role for most of the AcGH3 genes at the initiation of fruit ripening. AcGH3.1 was the only gene exhibiting ripening-associated expression. Further study showed that the expression of AcGH3.1 gene was induced by NAA (1-naphthylacetic acid, auxin analogue) and inhibited by 1-MCP (1-methylcyclopropene, ethylene receptor inhibitor), respectively. AcGH3.1 gene silencing inhibited gene expression and delayed fruit softening in kiwifruit. The results indicate that AcGH3.1 may play an important role in the softening process of fruits. Analysis of the AcGH3.1 promoter revealed the presence of many cis-elements related to hormones, light, and drought. The determination of GUS (β-Galactosidase) enzyme activity revealed that promoter activity increased strikingly upon abscisic acid (ABA), ethylene, or NAA treatment, and significantly decreased with salicylic acid (SA) treatment. The present study could help in the identification of GH3 genes and revelation of AcGH3.1 gene function during postharvest stages, which pave the way for further functional verification of the AcGH3.1 gene.