Deniz Dalkara

Dr. Deniz Dalkara


Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 June 2013 in Science Translational Medicine
Verified
Journal Article
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DDDeniz Dalkara
Deniz Dalkara
LBLeah C. Byrne
Leah C. Byrne
RKRyan R. Klimczak
Ryan R. Klimczak
MVMeike Visel
Meike Visel
LYLu Yin
Lu Yin
DSDavid Schaffer
David Schaffer
Injection of a new gene therapy vector into the easily accessible vitreous transduced the entire retina and rescued disease phenotypes.

24 May 2021 in Nature Medicine
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Journal Article
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JSJosé-Alain Sahel
José-Alain Sahel
EBElise Boulanger-Scemama
Elise Boulanger-Scemama
CPChloé Pagot
Chloé Pagot
AAAngelo Arleo
Angelo Arleo
FGFrancesco Galluppi
Francesco Galluppi
BRBotond Roska
Botond Roska

1 May 2015 in Cell
Verified
Journal Article
Closed access
NANajate Aït-Ali
Najate Aït-Ali
RFRam Fridlich
Ram Fridlich
GMGéraldine Millet-Puel
Géraldine Millet-Puel
ECEmmanuelle Clérin
Emmanuelle Clérin
FDFrançois Delalande
François Delalande
Thierry LéveillardThierry Léveillard
Thierry Léveillard

1 December 2009 in Molecular Therapy
Verified
Journal Article
Open access
DDDeniz Dalkara
Deniz Dalkara
KKKathleen D Kolstad
Kathleen D Kolstad
NCNatalia Caporale
Natalia Caporale
MVMeike Visel
Meike Visel
RKRyan R Klimczak
Ryan R Klimczak
JFJohn G Flannery
John G Flannery
Adeno-associated viral gene therapy has shown great promise in treating retinal disorders, with three promising clinical trials in progress. Numerous adeno-associated virus (AAV) serotypes can infect various cells of the retina when administered subretinally, but the retinal detachment accompanying this injection induces changes that negatively impact the microenvironment and survival of retinal neurons. Intravitreal administration could circumvent this problem, but only AAV2 can infect retinal cells from the vitreous, and transduction is limited to the inner retina. We therefore sought to investigate and reduce barriers to transduction from the vitreous. We fluorescently labeled several AAV serotype capsids and followed their retinal distribution after intravitreal injection. AAV2, 8, and 9 accumulate at the vitreoretinal junction. AAV1 and 5 show no accumulation, indicating a lack of appropriate receptors at the inner limiting membrane (ILM). Importantly, mild digestion of the ILM with a nonspecific protease enabled substantially enhanced transduction of multiple retinal cell types from the vitreous, with AAV5 mediating particularly remarkable expression in all retinal layers. This protease treatment has no effect on retinal function as shown by electroretinogram (ERG) and visual cortex cell population responses. These findings may help avoid limitations, risks, and damage associated with subretinal injections currently necessary for clinical gene therapy.

7 December 2016 in Science Translational Medicine
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Journal Article
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HSHendrik P. N. Scholl
Hendrik P. N. Scholl
RSRupert W. Strauss
Rupert W. Strauss
MSMandeep S. Singh
Mandeep S. Singh
DDDeniz Dalkara
Deniz Dalkara
BRBotond Roska
Botond Roska
JSJosé-Alain Sahel
José-Alain Sahel
This Review discusses current and emerging therapies for treating inherited retinal degeneration.

1 April 2011 in Investigative Ophthalmology & Visual Science
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Journal Article
Open access
PDF file
LYLu Yin
Lu Yin
KGKenneth Greenberg
Kenneth Greenberg
JHJennifer J. Hunter
Jennifer J. Hunter
DDDeniz Dalkara
Deniz Dalkara
KKKathleen D. Kolstad
Kathleen D. Kolstad
WMWilliam H. Merigan
William H. Merigan
Purpose.: Adeno-associated virus serotype 2 (AAV2) has been shown to be effective in transducing inner retinal neurons after intravitreal injection in several species. However, results in nonprimates may not be predictive of transduction in the human inner retina, because of differences in eye size and the specialized morphology of the high-acuity human fovea. This was a study of inner retina transduction in the macaque, a primate with ocular characteristics most similar to that of humans. Methods.: In vivo imaging and histology were used to examine GFP expression in the macaque inner retina after intravitreal injection of AAV vectors containing five distinct promoters. Results.: AAV2 produced pronounced GFP expression in inner retinal cells of the fovea, no expression in the central retina beyond the fovea, and variable expression in the peripheral retina. AAV2 vector incorporating the neuronal promoter human connexin 36 (hCx36) transduced ganglion cells within a dense annulus around the fovea center, whereas AAV2 containing the ubiquitous promoter hybrid cytomegalovirus (CMV) enhancer/chicken-β-actin (CBA) transduced both Müller and ganglion cells in a dense circular disc centered on the fovea. With three shorter promoters—human synapsin (hSYN) and the shortened CBA and hCx36 promoters (smCBA and hCx36sh)—AAV2 produced visible transduction, as seen in fundus images, only when the retina was altered by ganglion cell loss or enzymatic vitreolysis. Conclusions.: The results in the macaque suggest that intravitreal injection of AAV2 would produce high levels of gene expression at the human fovea, important in retinal gene therapy, but not in the central retina beyond the fovea.