Tonle Sap Lake (TSL) is a highly productive system and hosts a high fish diversity and is of paramount importance for sustaining protein supply for over 15 million Cambodians. Nevertheless, the ecology and factors influencing the spatial distribution of many fishes within the lake remain poorly understood. Using commercial fishing lot catch data from 1994/1995 to 1999/2000, fishing seasons and environmental data (land cover and bioclimatic variables), we describe spatial distribution of the eight most commercially important fish species, and investigate the effects of environmental factors on their distributions in the TSL. We found a strong variability in fish biomass across areas and between species. Specifically, Channa micropeltes was most abundant in the southern and northern sections of the TSL. Channa striata and Trichopodus microlepis were more common in the northern part of the TSL. Cyclocheilos enoplos, Barbonymus gonionotus, Pangasianodon hypophthalmus, and Gymnostomus spp. were abundant in the southern areas of the TSL while Phalacronotus spp. were abundant in few areas in both the north and the south. Flooded forest positively explained the variation in the biomass of P. hypophthalmus, C. striata, C. enopolos, and Phalacronotus spp. Likewise, the lake’s open water positively affects the biomass of P. hypophthalmus, C. enopolos, and Phalacronotus spp., while the agricultural field negatively impacts Gymnostomus spp. biomass distribution. We also found that some areas consistently hosted high fish biomass (e.g., lot 2, Kampong Thom; lot 6, Pursat; lot 2, Battambang, etc.). We, therefore, suggest that fisheries management and conservation planning focus on those areas, considering those areas significance as core fish habitat and important for catching fish.

To improve our knowledge of the migration pathway of a highly threatened fish species along the Mekong River, strontium isotope ratios (⁸⁷Sr/⁸⁶Sr) and 18 trace element concentrations were measured in the water and in the otoliths of an anadromous catfish, Pangasius krempfi, to infer its natal origin and potential migration pathways. Water was sampled at 18 locations along the mainstream, tributaries and distributaries of the Mekong River. To check for accuracy and precision, measurements of the ⁸⁷Sr/⁸⁶Sr ratios and trace element concentrations were then compared in two laboratories that use different analytical methods. Differences in trace element concentrations between locations were not significant and could not, therefore, be used to discriminate between migration pathways. However, the Mekong mainstream, tributaries and distributaries could all be discriminated using Sr isotopes. The ⁸⁷Sr/⁸⁶Sr profiles recorded in P. krempfi otoliths showed that there were three contingents with obligate freshwater hatching and variable spawning sites along the Mekong mainstream, from Phnom Penh (Cambodia) to Nong Khai (Thailand) or further. After hatching, the fish migrated more or less rapidly to the Mekong Delta and then settled for most of their lifetime in brackish water. Spawning habitats and migration routes may be threatened by habitat shifts and the increasing number of hydropower dams along the river, especially the contingents born above Khone Falls (Laos). The conservation of P. krempfi, as well as other migratory fish in the Mekong River, requires agreements, common actions and management by all countries along the Mekong River. This study highlighted the importance of using both Sr/Ca and ⁸⁷Sr/⁸⁶Sr ratios to understand life history of anadromous fishes as the ⁸⁷Sr/⁸⁶Sr ratio in the water was shown to be less effective than the Sr/Ca ratio in identifying movements between different saline areas.

Inland fisheries management in Cambodia has undergone two major policy reforms over the last two decades. These reforms led to the abolishment of a century-old commercial fishing lot system in 2012 and the establishment of new fish sanctuary and community fishing areas. However, the status of fisheries and fish assemblages following the reforms is not well understood. Here, we investigated the temporal changes in fish catch weight and fish assemblage structure for the period 1995–2000 before fishing lot abolishment (BLA) and for the period 2012–2015 after the removal of all fishing lots (after lot abolishment-ALA) using time-series fish catch data recorded from the Tonle Sap Lake (TSL), one of the world largest inland fisheries. We found (i) mean catch trends vary seasonally, with stable catch trends during the BLA and decreasing catch trends during the ALA and (ii) significant shifts in fish assemblage composition, notably a shift from large-bodied, migratory, and/or predatory species during the BLA toward more short-distance migratory and/or floodplain, small-bodied species during the ALA. Fishing lot abolishment coincided with substantial changes to floodplain habitats and increases in fishing pressure, threatening TSL fish stocks. Flow alterations caused by dams and climate change may exacerbate the problem. Therefore, to realize the fisheries reform objectives, it is imperative to strengthen the fisheries’ governance and management system, including effective law enforcement, institutional strengthening, improved planning, cooperation, and coordination as well as clearly defined roles and responsibilities among concerned stakeholders at all levels.

Although the Tonle Sap Lake is the largest natural inland lake in Southeast Asia, little is known about the spatio-temporal patterns of its composition and yields. The present paper aimed to investigate the temporal change of yields of the most dominant fish species and to evaluate the spatio-temporal changes in the fish community and the indicator species of assemblages. Fish catch data were collected from thirty-three fishing lots around the lake during the open season from October to May each year between 1994 and 2000. The fish yields were dominated by few commercial fishes: Channa micropeltes, Pangasianodon hypophthalmus, Channa striata, Cyclocheilichthys enoplos, Henicorhynchus spp., Barbonymus gonionotus, Micronema spp. and Trichopodus microlepis. The standard linear regression coefficients of the fish yields versus year were negative for all these commercial species except T. microlepis. Moreover, the total fish yields of the lake were temporally declined (standard coefficient = −2.410, adjusted r² = 0.272). Nonmetric multidimensional scaling of the fish assemblage data showed a clear opposition between northern assemblage and southern assemblage along the first axis, and the temporal pattern of the samples from 1994 to 1999 was explained by the second axis. The fish species assemblage from earlier years (1994 and 1995) was characterised by the abundance of all functional groups of black-white-grey fish species, but more recent years (1996–1999) were linked to white and grey functional groups, which was explained by a decrease in many black fishes.

Migratory fishes of the Mekong Basin are facing challenges from human-induced stressors. Quantifying the patterns of fish’s early life stages provides important information on spawning seasons, spawning and nursery habitats, reproductive strategies, migration and dispersal patterns, and stock status. However, the ecology of the Mekong larval fishes, including patterns and drivers of larval fish dispersal, is not well understood. Here, we investigate the temporal variability of drifting larval and juvenile fish assemblages in the Cambodian Mekong River and identify their environmental drivers using long-term (10 year) daily fish larval/juvenile data collections. We found that, in the Mekong main channel, the larval and juvenile assemblages were dominated by longitudinal migrants from the families Cyprinidae and Pangasiidae. Peak abundance and richness were found to occur in July and August, respectively. We detected a significant decline in larval and juvenile abundance and richness over the study period. Cross-wavelet analysis revealed that water levels always lead larval abundance, but lag richness. In addition, cross-correlation analysis observed that peak abundance and richness occurred eight weeks and one week, respectively, before the peak water level. We also discovered that species abundance and richness had a strongly positive relationship with maximum water levels. Variation in fish larval and juvenile abundance and richness was also related to total phosphorus, nitrate, alkalinity, and conductivity. Maximum water levels and the key water quality parameters (e.g., phosphorus, nitrate, alkalinity, and conductivity) significantly influence larval and juvenile fish abundance and richness patterns. Therefore, safeguarding natural seasonal flows, especially maximum flows associated with the peak flood pulse, as well as maintaining good water quality, are key to the reproductive success of many migratory fishes and effective dispersal of offspring to the lower floodplain for nursing, rearing, and growth. Clean and unregulated rivers support productive and diverse fisheries.

Tonle Sap lake-river floodplain ecosystem (TSE) is one of the world’s most productive freshwater systems. Changes in hydrology, climate, population density, and land use influence water quality in this system. We investigated long term water quality dynamics (22 years) in space and time and identified potential changes in nutrient limitation based on nutrient ratios of inorganic nitrogen and phosphorus. Water quality was assessed at five sites highlighting the dynamics in wet and dry seasons. Predictors of water quality included watershed land use, climate, population, and water level. Most water quality parameters varied across TSE, except pH and nitrate that remained constant at all sites. In the last decade, there is a change in the chemical nutrient ratio suggesting that nitrogen may be the primary limiting nutrient across the system. Water quality was strongly affected by development in the watershed i.e., flooded forest loss, climatic variation, population growth, and change in water level. Seasonal variations of water quality constituents were driven by precipitation and hydrology, notably the Mekong’s distinct seasonal flood pulse.