Alex Spaeth

Mr. Alex Spaeth

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
15 November 2024 in Nature Neuroscience
Verified
Journal Article
Closed access
PDF file
JAJohn P. Andrews
John P. Andrews
JGJinghui Geng
Jinghui Geng
KVKateryna Voitiuk
Kateryna Voitiuk
MEMatthew A. T. Elliott
Matthew A. T. Elliott
DSDavid Shin
David Shin
TNTomasz Jan Nowakowski
Tomasz Jan Nowakowski

24 November 2025 in Nature Neuroscience
Verified
Journal Article
Closed access
PDF file
TMTjitse Van der Molen
Tjitse Van der Molen
ASAlex Spaeth
Alex Spaeth
MCMattia Chini
Mattia Chini
SHSebastian Hernandez
Sebastian Hernandez
GKGregory A. Kaurala
Gregory A. Kaurala
TSTal Sharf
Tal Sharf

21 October 2020 in PLOS ONE
Verified
Journal Article
Open access
PDF file
ASAlex Spaeth
Alex Spaeth
MTMaryam Tebyani
Maryam Tebyani
DHDavid Haussler
David Haussler
MTMircea Teodorescu
Mircea Teodorescu
We propose a modular architecture for neuromorphic closed-loop control based on bistable relaxation oscillator modules consisting of three spiking neurons each. Like its biological prototypes, this basic component is robust to parameter variation but can be modulated by external inputs. By combining these modules, we can construct a neural state machine capable of generating the cyclic or repetitive behaviors necessary for legged locomotion. A concrete case study for the approach is provided by a modular robot constructed from flexible plastic volumetric pixels, in which we produce a forward crawling gait entrained to the natural frequency of the robot by a minimal system of twelve neurons organized into four modules.

2 February 2020 in Life
Verified
Journal Article
Open access
PDF file
ASAlex Spaeth
Alex Spaeth
MHMason Hargrave
Mason Hargrave
Implicit in the RNA world hypothesis is that prebiotic RNA synthesis, despite occurring in an environment without biochemical catalysts, produced the long RNA polymers which are essential to the formation of life. In order to investigate the prebiotic formation of long RNA polymers, we consider a general solution of functionally identical monomer units that are capable of bonding to form linear polymers by a step-growth process. Under the assumptions that (1) the solution is well-mixed and (2) bonding/unbonding rates are independent of polymerization state, the concentration of each length of polymer follows the geometric Flory-Schulz distribution. We consider the rate dynamics that produce this equilibrium; connect the rate dynamics, Gibbs free energy of bond formation, and the bonding probability; solve the dynamics in closed form for the representative special case of a Flory-Schulz initial condition; and demonstrate the effects of imposing a maximum polymer length. Afterwards, we derive a lower bound on the error introduced by truncation and compare this lower bound to the actual error found in our simulation. Finally, we suggest methods to connect these theoretical predictions to experimental results.

1 May 2020
Verified
Conference Paper
Closed access
ASAlex Spaeth
Alex Spaeth
MTMaryam Tebyani
Maryam Tebyani
DHDavid Haussler
David Haussler
MTMircea Teodorescu
Mircea Teodorescu
We propose a minimal yet highly biomimetic hierarchical controller based on a neuromorphic spiking central pattern generator (CPG) consisting of twelve simulated neurons modulated by sensory feedback. The robotic application of this controller is a flexible modular robot which uses DC linear actuators to morph its structure and achieve a crawling gait. It was shown in previous work that different gaits can be achieved by altering the number and physical location of structural modules. The proposed controller enables a modular style of controller design as well. Additional behaviors, or adaption of the controller to a different flexible robotic configuration, can be achieved by additional independent “neural modules” consisting of spiking neurons.

30 December 2023 in bioRxiv
Verified
Preprint
Open access
PDF file
TMTjitse Van der Molen
Tjitse Van der Molen
ASAlex Spaeth
Alex Spaeth
MCMattia Chini
Mattia Chini
JBJulian Bartram
Julian Bartram
ADAditya Dendukuri
Aditya Dendukuri
TSTal Sharf
Tal Sharf
Neuronal firing sequences are thought to be the basic building blocks of neural coding and information broadcasting within the brain. However, when sequences emerge during neurodevelopment remains unknown. We demonstrate that structured firing sequences are present in spontaneous activity of human and murine brain organoids and ex vivo neonatal brain slices from the murine somatosensory cortex. We observed a balance between temporally rigid and flexible firing patterns that are emergent phenomena in human and murine brain organoids and early postnatal murine somatosensory cortex, but not in primary dissociated cortical cultures. Our findings suggest that temporal sequences do not arise in an experience-dependent manner, but are rather constrained by an innate preconfigured architecture established during neurogenesis. These findings highlight the potential for brain organoids to further explore how exogenous inputs can be used to refine neuronal circuits and enable new studies into the genetic mechanisms that govern assembly of functional circuitry during early human brain development.