Aquaculture production has increased tremendously during the last decades, and new techniques have been developed, e.g., recirculating aquaculture systems (RAS). In RAS, the majority of water volume is circulated via mechanical and biological filters and reused in the tanks. However, the prevention and treatment of diseases in these systems are challenging, as the pathogens spread throughout the system, and the addition of chemicals and antibiotics disrupts the microbiome of the biofilters. The increasing antibiotic resistance has made phage therapy a relevant alternative for antibiotics in food production. Indeed, as host-specific and self-replicating agent they might be optimal for targeted pathogen eradication in RAS. We tested the survival and spread of Flavobacterium columnare -infecting phage FCL-2 in recirculating aquaculture fish farm with rainbow trout (Oncorhynchus mykiss) in a fully controlled study. After a single addition, phage persisted in water samples collected from tank, fixed bed, moving bed, and aeration unit up to 14 days, and in the water of rearing tanks, rainbow trout mucus, and bioreactor carrier media from the fixed and moving bed biofilters for 21 days. Furthermore, phage adsorbed preferentially to moving bed carrier media, which contained biofilm attached and from which higher phage numbers were recovered. This study shows phages as a potent strategy for maintaining biosecurity in RAS systems.

Fishmeal (FM) was substituted with soybean meal (Glycine max) (SBM) and bambaranut meal (Voandzeia subterranea) (BNM) in 10 experimental African catfish, Clarias gariepinus, diets. Feed formulation was designed using mixture model. The inclusion level of the three protein ingredients varied between 0% and 60%. Remaining 40% comprised of basal ingredients kept constant for all 10 feeds. African catfish of average initial weight 35.2 ± 0.9 g were fed with one of the treatment diets for 28 days. The protein:lipid ratios of the diets (range 1.5–3.4:1) were used in evaluating the feed utilization and growth of the fish. We found that catfish performances were mainly depending on ingredients and not the ratio itself. The protein:lipid ratios in the diets made of plant ingredients were high but SGR was low. Specific growth rate (SGR) increased with the increase of feed FM content, being ca. 5% day−1 with 60% FM diet but ca. 2% day−1 at both 60% BNM and 60% SBM diets. SGR was similar (3.5% day−1) with diets of 30% BNM or SBM inclusion with 30% FM. Feed conversion ratio increased from below 0.6 of the 60% FM diet up to 1.5 (60% SBM) and 1.7 (60% BNM). Protein efficiency ratio decreased linearly with increasing FM substitution, but protein productive value (PPV) was similar for catfish fed 60% FM diet and its 50% substitution with BNM or SBM. These results suggest that protein:lipid ratio cannot be used in assessing nutritional performance if the source of feed ingredient vary widely. However, these results suggest that BNM can partly substitute FM and completely replace SBM in the diets of African catfish.

Geosmin (GSM) and 2-methylisoborneol (MIB)-induced off-flavors can cause serious problems in a recirculating aquaculture system (RAS), such as delayed harvest and increased production costs, but also damage producers’ reputation. Traditionally, off-flavors have been removed by depuration before harvesting. Rainbow trout (Oncorhynchus mykiss) and European whitefish (Coregonus lavaretus) are commercially valuable species produced for consumers, both being suitable for rearing in RAS. In this study, European whitefish and rainbow trout were raised from juvenile up to 240 g (European whitefish) and 660 g (rainbow trout) to monitor the long-term accumulation of off-flavors. The concentrations in fillet of rainbow trout reached 3.6 ng·g⁻¹ (MIB) and 5.6 ng∙g⁻¹¹ (GSM) with lipid content of 22.5%, while for European whitefish up to 3.2 ng·g⁻¹ (MIB) and 3.9 ng·g⁻¹ (GSM) were found with 14.8% in lipid content. Concentrations up to 58 ng·L⁻¹ (MIB) and 49 ng·L⁻¹ (GSM) were found in the circulating water. Based on the results, the accumulation of MIB proceeds at similar pace for both species. In the case of GSM, the accumulation started similarly for both species but proceeded more quickly for rainbow trout after 140 days of the experiment, with a statistically significant difference (p < 0.05).

In recirculating aquaculture systems (RAS), off-flavors can accumulate in fish muscle tissue. They are problematic for consumer acceptance and the reputation of farmed fish products. Although off-flavors are not toxic at low concentrations, they often give fish muscle earthy, muddy, or other unwanted flavors. Traditionally, the study of off-flavors in fish focused on muddy and earthy off-flavors caused by geosmin (GSM) and 2-methylisoborneol (MIB), but other unwanted flavors and compounds have also been identified. In this study, the selected off-flavors were chemically quantified in fish from a RAS-rearing rainbow trout (Oncorhynchus mykiss) and in different stages of depuration. A group of trained panelists with experience in sensory evaluation was specifically trained in analyzing rainbow trout samples. The panelists evaluated the fish with a sensory profile of 29 sensory attributes (12 odor, 5 taste, and 12 flavor properties). Overall, the concentrations of all the studied off-flavor compounds decreased, some to below the limit of detection and others (e.g., octanal, octanoic acid, phenylacetaldehyde, and acetoin) to a certain low level. Moldy, earthy, and musty odors and flavors especially decreased during depuration compared to fish in RAS. This study shows the consistency of the chemical analysis and sensory profiling. It also provides important information about the effects of the depuration period in RAS and on the chemical and sensorial quality of rainbow trout.