Xinyu Fu

Dr. Xinyu Fu


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
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YXYuan Xu
Yuan Xu
XFXinyu Fu
Xinyu Fu
Abiotic stresses rewire plant central metabolism to maintain metabolic and energy homeostasis. Metabolites involved in the plant central metabolic network serve as a hub for regulating carbon and energy metabolism under various stress conditions. In this review, we introduce recent metabolomics techniques used to investigate the dynamics of metabolic responses to abiotic stresses and analyze the trend of publications in this field. We provide an updated overview of the changing patterns in central metabolic pathways related to the metabolic responses to common stresses, including flooding, drought, cold, heat, and salinity. We extensively review the common and unique metabolic changes in central metabolism in response to major abiotic stresses. Finally, we discuss the challenges and some emerging insights in the future application of metabolomics to study plant responses to abiotic stresses.

1 March 2020 in Plants
Verified
Journal Article
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BWBerkley Walker
Berkley Walker
DKDavid M. Kramer
David M. Kramer
NFNicholas Fisher
Nicholas Fisher
XFXinyu Fu
Xinyu Fu
Given their ability to harness chemical energy from the sun and generate the organic compounds necessary for life, photosynthetic organisms have the unique capacity to act simultaneously as their own power and manufacturing plant. This dual capacity presents many unique challenges, chiefly that energy supply must be perfectly balanced with energy demand to prevent photodamage and allow for optimal growth. From this perspective, we discuss the energy balancing network using recent studies and a quantitative framework for calculating metabolic ATP and NAD(P)H demand using measured leaf gas exchange and assumptions of metabolic demand. We focus on exploring how the energy balancing network itself is structured to allow safe and flexible energy supply. We discuss when the energy balancing network appears to operate optimally and when it favors high capacity instead. We also present the hypothesis that the energy balancing network itself can adapt over longer time scales to a given metabolic demand and how metabolism itself may participate in this energy balancing.

13 August 2022 in Journal of Experimental Botany
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Journal Article
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XFXinyu Fu
Xinyu Fu
BWBerkley Walker
Berkley Walker
Photorespiration is a dynamic process that is intimately linked to photosynthetic carbon assimilation. There is a growing interest in understanding carbon assimilation during dynamic conditions, but the role of photorespiration under such conditions is unclear. In this review, we discuss recent work relevant to the function of photorespiration under dynamic conditions, with a special focus on light transients. This work reveals that photorespiration is a fundamental component of the light induction of assimilation where variable diffusive processes limit CO2 exchange with the atmosphere. Additionally, metabolic interactions between photorespiration and the C3 cycle may help balance fluxes under dynamic light conditions. We further discuss how the energy demands of photorespiration present special challenges to energy balancing during dynamic conditions. We finish the review with an overview of why regulation of photorespiration may be important under dynamic conditions to maintain appropriate fluxes through metabolic pathways related to photorespiration such as nitrogen and one-carbon metabolism.

20 September 2023 in Plant Physiology
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Journal Article
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YXYuan Xu
Yuan Xu
AKAbubakarr A Koroma
Abubakarr A Koroma
SWSean E Weise
Sean E Weise
XFXinyu Fu
Xinyu Fu
TSThomas Sharkey
Thomas Sharkey
YSYair Shachar-Hill
Yair Shachar-Hill
Daylength, a seasonal and latitudinal variable, exerts a substantial impact on plant growth. However, the relationship between daylength and growth is nonproportional, suggesting the existence of adaptive mechanisms. Thus, our study aimed to comprehensively investigate the adaptive strategies employed by plants in response to daylength variation. We grew false flax (Camelina sativa) plants, a model oilseed crop, under long-day (LD) and short-day (SD) conditions and used growth measurements, gas exchange measurements, and isotopic labeling techniques, including 13C, 14C, and 2H2O, to determine responses to different daylengths. Our findings revealed that daylength influences various growth parameters, photosynthetic physiology, carbon partitioning, metabolic fluxes, and metabolite levels. SD plants employed diverse mechanisms to compensate for reduced CO2 fixation in the shorter photoperiod. These mechanisms included enhanced photosynthetic rates and reduced respiration in the light (RL), leading to increased shoot investment. Additionally, SD plants exhibited reduced rates of the glucose 6-phosphate (G6P) shunt and greater partitioning of sugars into starch, thereby sustaining carbon availability during the longer night. Isotopic labeling results further demonstrated substantial alterations in the partitioning of amino acids and TCA cycle intermediates between rapidly and slowly turning over pools. Overall, the results point to multiple developmental, physiological, and metabolic ways in which plants adapt to different daylengths to maintain growth.

24 December 2019 in Plant Physiology
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Journal Article
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XFXinyu Fu
Xinyu Fu
HYHannah Yang
Hannah Yang
FPFebriana Pangestu
Febriana Pangestu
Basil J NikolauBasil J Nikolau
Basil J Nikolau
Plastidic and peroxisomal acetate-activating enzymes prevent the hyperaccumulation of acetate that otherwise causes defects in vegetative and reproductive growt

24 February 2020 in Plant Physiology
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Journal Article
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XFXinyu Fu
Xinyu Fu
XGXin Guan
Xin Guan
RGRachel Garlock
Rachel Garlock
Basil J NikolauBasil J Nikolau
Basil J Nikolau
Three partially redundant acyl carrier protein isoforms support mitochondrial fatty acid biosynthesis.