Benedykt Wladyka

Dr. Benedykt Wladyka

Department of Analytical Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30387 Kraków, Poland
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Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 May 2010 in Toxins
Verified
Journal Article
Open access
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MBMichal Bukowski
Michal Bukowski
BWBenedykt Wladyka
Benedykt Wladyka
GDGrzegorz Dubin
Grzegorz Dubin
Staphylococcus aureus is an important pathogen of humans and livestock. It causes a diverse array of diseases, ranging from relatively harmless localized skin infections to life-threatening systemic conditions. Among multiple virulence factors, staphylococci secrete several exotoxins directly associated with particular disease symptoms. These include toxic shock syndrome toxin 1 (TSST-1), enterotoxins, and exfoliative toxins (ETs). The latter are particularly interesting as the sole agents responsible for staphylococcal scalded skin syndrome (SSSS), a disease predominantly affecting infants and characterized by the loss of superficial skin layers, dehydration, and secondary infections. The molecular basis of the clinical symptoms of SSSS is well understood. ETs are serine proteases with high substrate specificity, which selectively recognize and hydrolyze desmosomal proteins in the skin. The fascinating road leading to the discovery of ETs as the agents responsible for SSSS and the characterization of the molecular mechanism of their action, including recent advances in the field, are reviewed in this article.

26 April 2013 in Chemical Research in Toxicology
Verified
Journal Article
Closed access
DDDariusz Dziga
Dariusz Dziga
MWMarcin Wasylewski
Marcin Wasylewski
BWBenedykt Wladyka
Benedykt Wladyka
SNSonja Nybom
Sonja Nybom
Jussi MeriluotoJussi Meriluoto
Jussi Meriluoto

27 August 2024 in Molecules
Verified
Journal Article
Open access
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AZAliaksandr Zhydzetski
Aliaksandr Zhydzetski
ZGZuzanna Beata Głowacka-Grzyb
Zuzanna Beata Głowacka-Grzyb
MBMichal Bukowski
Michal Bukowski
TŻTomasz Żądło
Tomasz Żądło
EBEmilia Bonar
Emilia Bonar
BWBenedykt Wladyka
Benedykt Wladyka
The cell wall is an indispensable element of bacterial cells and a long-known target of many antibiotics. Penicillin, the first discovered beta-lactam antibiotic inhibiting the synthesis of cell walls, was successfully used to cure many bacterial infections. Unfortunately, pathogens eventually developed resistance to it. This started an arms race, and while novel beta-lactams, either natural or (semi)synthetic, were discovered, soon upon their application, bacteria were developing resistance. Currently, we are facing the threat of losing the race since more and more multidrug-resistant (MDR) pathogens are emerging. Therefore, there is an urgent need for developing novel approaches to combat MDR bacteria. The cell wall is a reasonable candidate for a target as it differentiates not only bacterial and human cells but also has a specific composition unique to various groups of bacteria. This ensures the safety and specificity of novel antibacterial agents that target this structure. Due to the shortage of low-molecular-weight candidates for novel antibiotics, attention was focused on peptides and proteins that possess antibacterial activity. Here, we describe proteinaceous agents of various origins that target bacterial cell wall, including bacteriocins and phage and bacterial lysins, as alternatives to classic antibiotic candidates for antimicrobial drugs. Moreover, advancements in protein chemistry and engineering currently allow for the production of stable, specific, and effective drugs. Finally, we introduce the concept of selective targeting of dangerous pathogens, exemplified by staphylococci, by agents specifically disrupting their cell walls.

15 November 2010 in Cell Cycle
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Journal Article
Closed access
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MZMichal Zdzalik
Michal Zdzalik
KPKatarzyna Pustelny
Katarzyna Pustelny
SKSylwia Kedracka-Krok
Sylwia Kedracka-Krok
KHKrzysztof Huben
Krzysztof Huben
APAleksandra Pecak
Aleksandra Pecak
GDGrzegorz Dubin
Grzegorz Dubin
The negative regulation of p53, a major human tumor suppressor, by Mdm2 and Mdmx is crucial for the survival of a cell, whereas its aberrant function is a common feature of cancer. Both Mdm proteins act through the spatial occlusion of the p53 transactivation (TA) domain and by the ubiquitination of p53, resulting in its degradation. Two p53 homologues, p63 and p73, have been described in humans. Unlike p53, these proteins regulate developmental processes rather than genome stability. Both p63 and p73 contain TA domains homologous to that of p53, but relatively little is known about their regulation by Mdm2 or Mdmx. Here, we present a detailed characterization of the interaction of Mdm2 and Mdmx with the TA domains of p63 and p73. Earlier reports of Mdm2 and Mdmx interactions with p73 are substantiated by the detailed quantitative characterization reported in this study. Most importantly, earlier contradictions concerning the presumed interaction of the Mdm proteins with p63 are convincingly resolved and for the first time, the affinities of these interactions are determined. Finally, the contribution of these findings to our understanding of the physiological role of these interactions is discussed.

1 April 2012 in Toxicon
Verified
Journal Article
Closed access
DDDariusz Dziga
Dariusz Dziga
BWBenedykt Wladyka
Benedykt Wladyka
GZGabriela Zielińska
Gabriela Zielińska
Jussi MeriluotoJussi Meriluoto
Jussi Meriluoto
MWMarcin Wasylewski
Marcin Wasylewski

22 January 2013 in Expert Opinion on Therapeutic Patents
Verified
Journal Article
Closed access
KZKrzysztof Zak
Krzysztof Zak
APAleksandra Pecak
Aleksandra Pecak
BRBarbara Rys
Barbara Rys
BWBenedykt Wladyka
Benedykt Wladyka
ADAlexander Dömling
Alexander Dömling
GDGrzegorz Dubin
Grzegorz Dubin
Introduction: One of the hallmarks of cancer cells is the inactivation of the p53 pathway either due to mutations in the p53 gene or over-expression of negative regulators, Mdm2 and/or MdmX. Pharmacological disruption of the Mdm2/X–p53 interaction to restore p53 activity is an attractive concept, aiming at a targeted and non-toxic cancer treatment. Areas covered: The introduction covers the biological role of p53 pathway and its regulation by Mdm2 and MdmX in normal and cancer cells and the current repertoire and development status of inhibitors of the Mdm2/X–p53 interaction for the treatment of cancer. The main part of the article covers patents and patent applications describing small molecule inhibitors of the Mdm2/X–p53 interaction published from 2011 until 2012. Expert opinion: The area of small molecule Mdm2/X–p53 interaction inhibitor development is progressing fast. Several Phase I clinical studies and preclinical programs are now in progress, however, the clinical proof concept has yet to be demonstrated. Multiple available compounds inhibit Mdm2–p53 interaction with nanomolar affinities, but MdmX is still missing such potent binders. Since research points to a complementary mode of Mdm2 and MdmX action, the future compound classes will possibly want to include dual actions versus Mdm2 and MdmX.