Federico Papa

Dr. Federico Papa

Institute for Systems Analysis and Computer Science “A. Ruberti”, National Research Council, 00185 Rome, Italy
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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 May 2016 in PLOS ONE
Verified
Journal Article
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ABAlessandro Bertuzzi
Alessandro Bertuzzi
FCFederica Conte
Federica Conte
GMGeltrude Mingrone
Geltrude Mingrone
Federico PapaFederico Papa
Federico Papa
SSSerenella Salinari
Serenella Salinari
CSCarmela Sinisgalli
Carmela Sinisgalli
Insulin resistance is the common denominator of several diseases including type 2 diabetes and cancer, and investigating the mechanisms responsible for insulin signaling impairment is of primary importance. A mathematical model of the insulin signaling network (ISN) is proposed and used to investigate the dose-response curves of components of this network. Experimental data of C2C12 myoblasts with phosphatase and tensin homologue (PTEN) suppressed and data of L6 myotubes with induced insulin resistance have been analyzed by the model. We focused particularly on single and double Akt phosphorylation and pointed out insulin signaling changes related to insulin resistance. Moreover, a new characterization of the upstream signaling of the mammalian target of rapamycin complex 2 (mTORC2) is presented. As it is widely recognized that ISN proteins have a crucial role also in cell proliferation and death, the ISN model was linked to a cell population model and applied to data of a cell line of acute myeloid leukemia treated with a mammalian target of rapamycin inhibitor with antitumor activity. The analysis revealed simple relationships among the concentrations of ISN proteins and the parameters of the cell population model that characterize cell cycle progression and cell death.

14 July 2020 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
Paolo Di GiamberardinoPaolo Di Giamberardino
Paolo Di Giamberardino
Daniela IacovielloDaniela Iacoviello
Daniela Iacoviello
Federico PapaFederico Papa
Federico Papa
CSCarmela Sinisgalli
Carmela Sinisgalli
The present work deals with an Ordinary Differential Equation (ODE) model specifically designed to describe the COVID-19 evolution in Italy. The model is particularised on the basis of National data about the infection status of the Italian population to obtain numerical solutions that effectively reproduce the real data. Our epidemic model is a classical SEIR model that incorporates two compartments of infected subpopulations, representing diagnosed and undiagnosed individuals respectively, and an additional quarantine compartment. Possible control actions representing social, political, and medical interventions are also included. The numerical results of the proposed model identification by least square fitting are analysed and commented with special emphasis on the estimation of the number of asymptomatic infective individuals. Our fitting results are in good agreement with the epidemiological data. Short and long-term predictions on the evolution of the disease are also given.

1 January 2018 in Mathematical Biosciences and Engineering
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Journal Article
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FCFilippo Cacace
Filippo Cacace
VCValerio Cusimano
Valerio Cusimano
AGAlfredo Germani
Alfredo Germani
Pasquale PalumboPasquale Palumbo
Pasquale Palumbo
Federico PapaFederico Papa
Federico Papa
A tumor growth model accounting for angiogenic stimulation and inhibition is here considered, and a closed-loop control law is presented with the aim of tumor volume reduction by means of anti-angiogenic administration. To this end the output-feedback linearization theory is exploited, with the feedback designed on the basis of a state observer for nonlinear systems. Measurements are supposed to be acquired at discrete sampling times, and a novel theoretical development in the area of time-delay systems is applied in order to derive a continuous-time observer in spite of the presence of sampled measurements. The overall control scheme allows to set independently the control and the observer parameters thanks to the structural properties of the tumor growth model. Simulations are carried out in order to mimic a real experimental framework on mice. These results seem extremely promising: they provide very good performances according to the measurements sampling interval suggested by the experimental literature, and show a noticeable level of robustness against the observer initial estimate, as well as against the uncertainties affecting the model parameters.

3 September 2021 in Nonlinear Dynamics
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Journal Article
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Paolo Di GiamberardinoPaolo Di Giamberardino
Paolo Di Giamberardino
Daniela IacovielloDaniela Iacoviello
Daniela Iacoviello
Federico PapaFederico Papa
Federico Papa
CSCarmela Sinisgalli
Carmela Sinisgalli
An epidemic multi-group model formed by interconnected SEIR-like structures is formulated and used for data fitting to gain insight into the COVID-19 dynamics and into the role of non-pharmaceutical control actions implemented to limit the infection spread since its outbreak in Italy. The single submodels provide a rather accurate description of the COVID-19 evolution in each subpopulation by an extended SEIR model including the class of asymptomatic infectives, which is recognized as a determinant for disease diffusion. The multi-group structure is specifically designed to investigate the effects of the inter-regional mobility restored at the end of the first strong lockdown in Italy (June 3, 2020). In its time-invariant version, the model is shown to enjoy some analytical stability properties which provide significant insights on the efficacy of the implemented control measurements. In order to highlight the impact of human mobility on the disease evolution in Italy between the first and second wave onset, the model is applied to fit real epidemiological data of three geographical macro-areas in the period March–October 2020, including the mass departure for summer holidays. The simulation results are in good agreement with the data, so that the model can represent a useful tool for predicting the effects of the combination of containment measures in triggering future pandemic scenarios. Particularly, the simulation shows that, although the unrestricted mobility alone appears to be insufficient to trigger the second wave, the human transfers were crucial to make uniform the spatial distribution of the infection throughout the country and, combined with the restart of the production, trade, and education activities, determined a time advance of the contagion increase since September 2020.

29 August 2014 in Journal of Mathematical Biology
Verified
Journal Article
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CBC. Bruni
C. Bruni
FCFederica Conte
Federica Conte
Federico PapaFederico Papa
Federico Papa
CSCarmela Sinisgalli
Carmela Sinisgalli

1 February 2023 in Journal of Theoretical Biology
Verified
Journal Article
Open access
Federico PapaFederico Papa
Federico Papa
ABAlessandro Borri
Alessandro Borri
Pasquale PalumboPasquale Palumbo
Pasquale Palumbo
In this work we address the problem of tumour growth control by properly exploiting a low-dimensional model that grounds on the Chemical Reaction Network (CRN) formalism. Originally conceived to work both in deterministic and stochastic frameworks, it is shown that, except for the case of very low number of tumour cells, the deterministic approach is appropriate to characterize the system behaviour, especially for control planning purposes. Two alternative control approaches are here investigated. One trivially assumes a constant infusion of external drug administration, the other is designed according to a state-feedback control scheme, with complete or partial knowledge of the state. Pros and cons of both control laws are investigated, showing that the tumour size at the beginning of the therapy plays a role of paramount importance for fixed infusion therapies, whilst only state-feedback laws can eradicate arbitrarily large tumours.