Alejandro Mora Rubio

Mr. Alejandro Mora Rubio


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 December 2021 in Machine Learning with Applications
Verified
Journal Article
Open access
DADaniel Arias-Garzón
Daniel Arias-Garzón
JAJesús Alejandro Alzate-Grisales
Jesús Alejandro Alzate-Grisales
SOSimon Orozco-Arias
Simon Orozco-Arias
HAHarold Brayan Arteaga-Arteaga
Harold Brayan Arteaga-Arteaga
MBMario Alejandro Bravo-Ortiz
Mario Alejandro Bravo-Ortiz
RTReinel Tabares-Soto
Reinel Tabares-Soto
COVID-19 global pandemic affects health care and lifestyle worldwide, and its early detection is critical to control cases’ spreading and mortality. The actual leader diagnosis test is the Reverse transcription Polymerase chain reaction (RT-PCR), result times and cost of these tests are high, so other fast and accesible diagnostic tools are needed. Inspired by recent research that correlates the presence of COVID-19 to findings in Chest X-ray images, this papers’ approach uses existing deep learning models (VGG19 and U-Net) to process these images and classify them as positive or negative for COVID-19. The proposed system involves a preprocessing stage with lung segmentation, removing the surroundings which does not offer relevant information for the task and may produce biased results; after this initial stage comes the classification model trained under the transfer learning scheme; and finally, results analysis and interpretation via heat maps visualization. The best models achieved a detection accuracy of COVID-19 around 97%.

24 August 2023 in PeerJ Computer Science
Verified
Journal Article
Open access
PDF file
ARAlejandro Mora Rubio
Alejandro Mora Rubio
MBMario Alejandro Bravo-Ortíz
Mario Alejandro Bravo-Ortíz
SASebastián Quiñones Arredondo
Sebastián Quiñones Arredondo
JTJose Manuel Saborit Torres
Jose Manuel Saborit Torres
GRGonzalo A. Ruz
Gonzalo A. Ruz
RTReinel Tabares-Soto
Reinel Tabares-Soto
Alzheimer’s disease (AD) is a progressive type of dementia characterized by loss of memory and other cognitive abilities, including speech. Since AD is a progressive disease, detection in the early stages is essential for the appropriate care of the patient throughout its development, going from asymptomatic to a stage known as mild cognitive impairment (MCI), and then progressing to dementia and severe dementia; is worth mentioning that everyone suffers from cognitive impairment to some degree as we age, but the relevant task here is to identify which people are most likely to develop AD. Along with cognitive tests, evaluation of the brain morphology is the primary tool for AD diagnosis, where atrophy and loss of volume of the frontotemporal lobe are common features in patients who suffer from the disease. Regarding medical imaging techniques, magnetic resonance imaging (MRI) scans are one of the methods used by specialists to assess brain morphology. Recently, with the rise of deep learning (DL) and its successful implementation in medical imaging applications, it is of growing interest in the research community to develop computer-aided diagnosis systems that can help physicians to detect this disease, especially in the early stages where macroscopic changes are not so easily identified. This article presents a DL-based approach to classifying MRI scans in the different stages of AD, using a curated set of images from Alzheimer’s Disease Neuroimaging Initiative and Open Access Series of Imaging Studies databases. Our methodology involves image pre-processing using FreeSurfer, spatial data-augmentation operations, such as rotation, flip, and random zoom during training, and state-of-the-art 3D convolutional neural networks such as EfficientNet, DenseNet, and a custom siamese network, as well as the relatively new approach of vision transformer architecture. With this approach, the best detection percentage among all four architectures was around 89% for AD vs. Control, 80% for Late MCI vs. Control, 66% for MCI vs. Control, and 67% for Early MCI vs. Control.

29 November 2021 in PeerJ Computer Science
Verified
Journal Article
Open access
PDF file
HAHarold Brayan Arteaga-Arteaga
Harold Brayan Arteaga-Arteaga
ARAlejandro Mora Rubio
Alejandro Mora Rubio
FFFrank Florez
Frank Florez
NMNicolas Murcia-Orjuela
Nicolas Murcia-Orjuela
CDCristhian Eduardo Diaz-Ortega
Cristhian Eduardo Diaz-Ortega
RTReinel Tabares-Soto
Reinel Tabares-Soto
Recent advances in artificial intelligence with traditional machine learning algorithms and deep learning architectures solve complex classification problems. This work presents the performance of different artificial intelligence models to classify two-phase flow patterns, showing the best alternatives for this specific classification problem using two-phase flow regimes (liquid and gas) in pipes. Flow patterns are affected by physical variables such as superficial velocity, viscosity, density, and superficial tension. They also depend on the construction characteristics of the pipe, such as the angle of inclination and the diameter. We selected 12 databases (9,029 samples) to train and test machine learning models, considering these variables that influence the flow patterns. The primary dataset is Shoham (1982), containing 5,675 samples with six different flow patterns. An extensive set of metrics validated the results obtained. The most relevant characteristics for training the models using Shoham (1982) dataset are gas and liquid superficial velocities, angle of inclination, and diameter. Regarding the algorithms, the Extra Trees model classifies the flow patterns with the highest degree of fidelity, achieving an accuracy of 98.8%.

31 August 2021 in PeerJ Computer Science
Verified
Journal Article
Open access
PDF file
Reinel SotoReinel Soto
Reinel Soto
HAHarold Brayan Arteaga-Arteaga
Harold Brayan Arteaga-Arteaga
ARAlejandro Mora Rubio
Alejandro Mora Rubio
MBMario Alejandro Bravo-Ortíz
Mario Alejandro Bravo-Ortíz
DADaniel Arias-Garzón
Daniel Arias-Garzón
RRRaúl Ramos-Pollán
Raúl Ramos-Pollán
In recent years, the traditional approach to spatial image steganalysis has shifted to deep learning (DL) techniques, which have improved the detection accuracy while combining feature extraction and classification in a single model, usually a convolutional neural network (CNN). The main contribution from researchers in this area is new architectures that further improve detection accuracy. Nevertheless, the preprocessing and partition of the database influence the overall performance of the CNN. This paper presents the results achieved by novel steganalysis networks (Xu-Net, Ye-Net, Yedroudj-Net, SR-Net, Zhu-Net, and GBRAS-Net) using different combinations of image and filter normalization ranges, various database splits, different activation functions for the preprocessing stage, as well as an analysis on the activation maps and how to report accuracy. These results demonstrate how sensible steganalysis systems are to changes in any stage of the process, and how important it is for researchers in this field to register and report their work thoroughly. We also propose a set of recommendations for the design of experiments in steganalysis with DL.

23 October 2023 in IEEE Access
Verified
Journal Article
Open access
JAJesus Alejandro Alzate-Grisales
Jesus Alejandro Alzate-Grisales
ARAlejandro Mora Rubio
Alejandro Mora Rubio
FGFrancisco García García
Francisco García García
Reinel SotoReinel Soto
Reinel Soto
MIMaria de la Iglesia-Vaya
Maria de la Iglesia-Vaya
Prostate cancer (PCa) is one of the leading causes of cancer-related mortality among men worldwide. Accurate and efficient segmentation of clinically significant prostate cancer (csPCa) regions from magnetic resonance imaging (MRI) plays a crucial role in diagnosis, treatment planning, and monitoring of the disease, however, this is a challenging task even for the specialized clinicians. This study presents SAM-UNETR, a novel model for segmenting csPCa regions from MRI images. SAM-UNETR combines a transformer-encoder from the Segment Anything Model (SAM), a versatile segmentation model trained on 11 million images, with a residual-convolution decoder inspired by UNETR. The model uses multiple image modalities and applies prostate zone segmentation, normalization, and data augmentation as preprocessing steps. The performance of SAM-UNETR is compared with three other models using the same strategy and preprocessing. The results show that SAM-UNETR achieves superior reliability and accuracy in csPCa segmentation, especially when using transfer learning for the image encoder. This demonstrates the adaptability of large-scale models for different tasks. SAM-UNETR attains a Dice Score of 0.467 and an AUROC of 0.77 for csPCa prediction.

17 September 2024 in Neural Computing and Applications
Verified
Journal Article
Closed access
PDF file
MBMario Alejandro Bravo-Ortiz
Mario Alejandro Bravo-Ortiz
SHSergio Alejandro Holguin-Garcia
Sergio Alejandro Holguin-Garcia
SQSebastián Quiñones-Arredondo
Sebastián Quiñones-Arredondo
ARAlejandro Mora Rubio
Alejandro Mora Rubio
EGErnesto Guevara-Navarro
Ernesto Guevara-Navarro
Reinel SotoReinel Soto
Reinel Soto