Large bodies of water represent major obstacles for the migration of soaring birds because thermal updrafts are absent or weak over water. Soaring birds are known to time their water crossings with favourable weather conditions and there are records of birds falling into the water and drowning in large numbers. However, it is still unclear how environmental factors, individual traits and trajectory choices affect their water crossing performance, this being important to understand the fitness consequences of water barriers for this group of birds. We addressed this problem using the black kiteMilvus migransas model species at a major migration bottleneck, the Strait of Gibraltar. We recorded high‐resolution GPS and triaxial accelerometer data for 73 birds while crossing the Strait of Gibraltar, allowing the determination of sea crossing duration, length, altitude, speed and tortuosity, the flapping behaviour of birds and their failed crossing attempts. These parameters were modelled against wind speed and direction, time of the day, solar irradiance (proxy of thermal uplift), starting altitude and distance to Morocco, and age and sex of birds. We found that sea crossing performance of black kites is driven by their age, the wind conditions, the starting altitude and distance to Morocco. Young birds made longer sea crossings and reached lower altitude above the sea than adults. Crosswinds promoted longer sea crossings, with birds reaching lower altitudes and with higher flapping effort. Birds starting at lower altitudes were more likely to quit or made higher flapping effort to complete the crossing. The location where birds started the sea crossings impacted crossing distance and duration. We present evidence that explains why migrating soaring birds accumulate at sea passages during adverse weather conditions. Strong crosswinds during sea crossings force birds to extended flap‐powered flight at low altitude, which may increase their chances of falling in the water. We also showed that juvenile birds assume more risks than adults. Finally, the way in which birds start the sea crossing is crucial for their success, particularly the starting altitude, which dictates how far birds can reach with reduced flapping effort.

Understanding how soaring birds use updrafts at small spatial scales is important to identify ecological constraints of movement, and may help to prevent conflicts between wind-energy development and the conservation of wildlife. We combined high-frequency GPS animal tracking and fine-spatial-scale uplift modelling to establish a link between flight behaviour of soaring birds and the distribution of updrafts. We caught 21 black kites (Milvus migrans) and GPS-tracked them while flying over the Tarifa region, on the Spanish side of the Strait of Gibraltar. This region has a diverse topography and land cover, favouring a heterogeneous updraft spatial distribution. Bird tracks were segmented and classified into flight modes from motion parameters. Thermal and orographic uplift velocities were modelled from publically available remote-sensing and meteorological data. We found that birds perform circular soaring in areas of higher predicted thermal uplift and linear soaring in areas of higher predicted orographic uplift velocity. We show that updraft maps produced from publically available data can be used to predict where soaring birds will concentrate their flight paths and how they will behave in flight. We recommend the use of this methodological approach to improve environmental impact assessments of new wind-energy installations.