Plants coevolved with their antioxidant defense systems, which detoxify and adjust levels of reactive oxygen species (ROS) under multiple plant stresses. We performed whole-genome identification of ascorbate peroxidase (APX) and catalase (CAT) families in cultivated and wild soybeans. In cultivated and wild soybean genomes, we identified 11 and 10 APX genes, respectively, whereas the numbers of identified CAT genes were four in each species. Comparative phylogenetic analysis revealed more homology among cultivated and wild soybeans relative to other legumes. Exon/intron structure, motif and synteny blocks are conserved in cultivated and wild species. According to the Ka/Ks value, purifying selection is a major force for evolution of these gene families in wild soybean; however, the APX gene family was evolved by both positive and purifying selection in cultivated soybean. Segmental duplication was a major factor involved in the expansion of APX and CAT genes. Expression patterns revealed that APX and CAT genes are differentially expressed across fourteen different soybean tissues under water deficit (WD), heat stress (HS) and combined drought plus heat stress (WD + HS). Altogether, the current study provides broad insights into these gene families in soybeans. Our results indicate that APX and CAT gene families modulate multiple stress response in soybeans.

Survival of living organisms depends on the availability of water resources required for agriculture. In the current scenario of limited water resources, it is our priority to maximise the yield potential of crops with a minimum supply of available water. In this study, we evaluated seven cultivated varieties of Gossypium hirsutum (FH-114, FH-152, FH-326, FH-492, FH-942, VH-327 and FH-NOOR) for their tolerance, yield potential and fibre quality under water shortages. We also studied the effect of drought stress on osmoregulation, chlorophyll content, antioxidant (peroxidase and catalase) activity, lipid peroxidation and secondary metabolite accumulation in the varieties under study. It was revealed that three varieties (FH-114, FH-152 and VH-327) exhibited a lower stress susceptibility index and more tolerance to drought stress. All the varieties demonstrated enhanced proline and malondialdehyde content, but no significant change in chlorophyll content was observed under limited water supply. Antioxidant activity offered by catalase and phenolic content was enhanced in FH-492 whilst peroxidase activity increased in FH-114 and FH-326. Phenolic content was highest in FH-942 and decreased significantly in the remaining varieties. Ginning outturn of the cotton varieties increased in VH-327 (19.8%) and FH-326 (3.7%), was not affected in FH-114 and FH-492 and was reduced in FH-152, FH-942 and FH-NOOR. All cotton varieties tested showed an increase in micronaire thickness when exposed to drought stress as early as the seedling stage. This study highlights the evaluation and screening of cotton varieties for their response to drought stress in terms of yield and fibre quality when exposed to water shortages during plant development and can help in devising irrigation plans.

| The upland cotton ( G. hirsutum L.) is utmost natural fiber used in textile industry. Awareness about genetic diversity is very essential for fruitful genetic improvement approaches. Correlation, principal component analysis (PCA) and cluster analyses were performed to estimate genetic diversity in 25 cotton genotypes. Correlation analysis revealed that days to first square, flower and boll opening were positively associated with seed cotton yield. Staple length and CLCuV % were negatively associated with fiber fineness and yield respectively. In principal component analysis, four out of 14 principal components were selected with Eigen value ˃ 1. The four principal components contributed 79.9% towards variability. In PC-I, there was maximum positive factor loading of earliness traits, fiber fineness and negative factor loading of sympodia per plant and seed cotton yield. In PC-II, there was maximum positive factor loading of bolls per plant and GOT % while negative factor loading for CLCuV % and fiber length. A biplot between PC-I and PC-II showed that major contribution towards variability of fiber fineness and earliness traits among the studied genotypes. In cluster analysis, 25 genotypes were allocated in four clusters. Cluster-I was the largest by having 10 genotypes while clusters-III and IV each having six genotypes, and cluster-II was the smallest having three genotypes.

The current study demonstrates the practical application of optical seed priming technology to improve cotton seed germination, plant growth, crop yield, and fiber quality. The hypothesis of this study is that seed irradiation with different colors of light can improve germination and cotton productivity in different environments. In the priming of cotton seeds, a wider range of the light spectrum was used, ranging from ultraviolet (UV) to red wavelengths. Various light sources such as blue LED, red LED, diode laser, UV-B, and UV-C were studied, along with different exposure times and energy densities. The exposure time ranged from 1.0 to 36.0 minutes, while the energy density doses varied from 88 to 7550 mJ cm^-2, depending on the light source. In laboratory conditions, the investigation on the impact of optical seed priming on germination showed a maximum improvement of up to 180% compared to the control group. Among the different light sources and energy densities, blue LED light was found to be the most effective for enhancing cotton seed germination across different varieties. To validate the findings from the laboratory, large-scale field trials were conducted in two different environments in Pakistan, namely Tandojam and Faisalabad. The field trials demonstrated significant improvements in germination and yield, with increases of up to 37% and 74% over the control group, respectively. Once again, blue LED light emerged as the best light source for optical seed priming at the farm level. These field trials provided encouraging results, indicating the potential of the eco-friendly optical seed priming technique. The study suggests that optical seed priming can be a commercially viable technology for improving cotton seed germination, plant growth, crop yield, and fiber quality. By utilizing this technique, growers and researchers in developing countries can address the challenge of poor cotton germination and potentially enhance their agricultural productivity.