Guillermo Bordanaba

Dr. Guillermo Bordanaba

CIC bioGUNE
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 June 2021 in Nature Protocols
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Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
FRFelix Royo
Felix Royo
SKSergei G. Kruglik
Sergei G. Kruglik
JFJuan M Falcon-Perez
Juan M Falcon-Perez

1 November 2020 in Metabolic Engineering
Verified
Journal Article
Open access
NCNico J Claassens
Nico J Claassens
Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
CCCharles A.R. Cotton
Charles A.R. Cotton
AMAlberto De Maria
Alberto De Maria
MFMax Finger-Bou
Max Finger-Bou
ABArren Bar-Even
Arren Bar-Even
Formate can be directly produced from CO2 and renewable electricity, making it a promising microbial feedstock for sustainable bioproduction. Cupriavidus necator is one of the few biotechnologically-relevant hosts that can grow on formate, but it uses the Calvin cycle, the high ATP cost of which limits biomass and product yields. Here, we redesign C. necator metabolism for formate assimilation via the synthetic, highly ATP-efficient reductive glycine pathway. First, we demonstrate that the upper pathway segment supports glycine biosynthesis from formate. Next, we explore the endogenous route for glycine assimilation and discover a wasteful oxidation-dependent pathway. By integrating glycine biosynthesis and assimilation we are able to replace C. necator's Calvin cycle with the synthetic pathway and achieve formatotrophic growth. We then engineer more efficient glycine metabolism and use short-term evolution to optimize pathway activity. The final growth yield we achieve (2.6 gCDW/mole-formate) nearly matches that of the WT strain using the Calvin Cycle (2.9 gCDW/mole-formate). We expect that further rational and evolutionary optimization will result in a superior formatotrophic C. necator strain, paving the way towards realizing the formate bio-economy.

15 January 2021 in Cancers
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Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
IRATXE MADARIETAIRATXE MADARIETA
IRATXE MADARIETA
BOBeatriz Olalde-Graells
Beatriz Olalde-Graells
JFJuan M Falcon-Perez
Juan M Falcon-Perez
FRFelix Royo
Felix Royo
The improvement of culturing techniques to model the environment and physiological conditions surrounding tumors has also been applied to the study of extracellular vesicles (EVs) in cancer research. EVs role is not only limited to cell-to-cell communication in tumor physiology, they are also a promising source of biomarkers, and a tool to deliver drugs and induce antitumoral activity. In the present review, we have addressed the improvements achieved by using 3D culture models to evaluate the role of EVs in tumor progression and the potential applications of EVs in diagnostics and therapeutics. The most employed assays are gel-based spheroids, often utilized to examine the cell invasion rate and angiogenesis markers upon EVs treatment. To study EVs as drug carriers, a more complex multicellular cultures and organoids from cancer stem cell populations have been developed. Such strategies provide a closer response to in vivo physiology observed responses. They are also the best models to understand the complex interactions between different populations of cells and the extracellular matrix, in which tumor-derived EVs modify epithelial or mesenchymal cells to become protumor agents. Finally, the growth of cells in 3D bioreactor-like systems is appointed as the best approach to industrial EVs production, a necessary step toward clinical translation of EVs-based therapy.

20 September 2021 in Industrial & Engineering Chemistry Research
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Journal Article
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NMNazila Masoud
Nazila Masoud
Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
THTomas van Haasterecht
Tomas van Haasterecht
JBJohannes Hendrik Bitter
Johannes Hendrik Bitter
Direct CO2 capture from air is of prime importance to mitigate the negative effects of global warming. Potassium carbonate (K2CO3) is a promising sorbent for the capture of CO2 from air. K2CO3 chemisorbs CO2 from air in the presence of water (the so-called carbonation reaction), even in very low concentrations (410 ppm). To make efficient use of K2CO3, it is dispersed on a support. Carbon-based supports are promising because of their high hydrothermal stability. Carbons have different structural and chemical properties; however, these can be tuned during preparation. Little is known about the relation between carbon properties and their performance, after K2CO3 deposition. We investigated the role of support surface composition on the performance of carbon-supported K2CO3. By using carbons with different numbers of surface oxygen groups, that is, different polarities, we show that K2CO3 supported on an apolar carbon results in a higher capacity CO2 capture. We propose that a polar support attracts polar H2O molecules on the K2CO3 sorbent, resulting in a low carbonation. In contrast, an apolar support lowers the local H2O concentration on the sorbent and favorably attracts apolar CO2 molecules, hence promoting carbonation.

12 December 2020 in Plant Biotechnology Journal
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TATrine Andersen
Trine Andersen
BLBriardo Llorente
Briardo Llorente
Luca MorelliLuca Morelli
Luca Morelli
STSalvador Torres‐Montilla
Salvador Torres‐Montilla
Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
MRManuel Rodriguez-Concepcion
Manuel Rodriguez-Concepcion
Summary: Carotenoids are lipophilic plastidial isoprenoids highly valued as nutrients and natural pigments. A correct balance of chlorophylls and carotenoids is required for photosynthesis and therefore highly regulated, making carotenoid enrichment of green tissues challenging. Here we show that leaf carotenoid levels can be boosted through engineering their biosynthesis outside the chloroplast. Transient expression experiments in Nicotiana benthamiana leaves indicated that high extraplastidial production of carotenoids requires an enhanced supply of their isoprenoid precursors in the cytosol, which was achieved using a deregulated form of the main rate‐determining enzyme of the mevalonic acid (MVA) pathway. Constructs encoding bacterial enzymes were used to convert these MVA‐derived precursors into carotenoid biosynthetic intermediates that do not normally accumulate in leaves, such as phytoene and lycopene. Cytosolic versions of these enzymes produced extraplastidial carotenoids at levels similar to those of total endogenous (i.e. chloroplast) carotenoids. Strategies to enhance the development of endomembrane structures and lipid bodies as potential extraplastidial carotenoid storage systems were not successful to further increase carotenoid contents. Phytoene was found to be more bioaccessible when accumulated outside plastids, whereas lycopene formed cytosolic crystalloids very similar to those found in the chromoplasts of ripe tomatoes. This extraplastidial production of phytoene and lycopene led to an increased antioxidant capacity of leaves. Finally, we demonstrate that our system can be adapted for the biofortification of leafy vegetables such as lettuce.

9 May 2024 in Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
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Journal Article
Open access
Guillermo BordanabaGuillermo Bordanaba
Guillermo Bordanaba
FRFélix Royo
Félix Royo
OAOihane E. Albóniga
Oihane E. Albóniga
ACAled Clayton
Aled Clayton
JFJuan Manuel Falcón-Pérez
Juan Manuel Falcón-Pérez
JWJason Webber
Jason Webber
The prostate gland is a complex and heterogeneous organ composed of epithelium and stroma. Whilst many studies into prostate cancer focus on epithelium, the stroma is known to play a key role in disease with the emergence of a cancer-associated fibroblasts (CAF) phenotype associated upon disease progression. In this work, we studied the metabolic rewiring of stromal fibroblasts following differentiation to a cancer-associated, myofibroblast-like, phenotype. We determined that CAFs were metabolically more active compared to normal fibroblasts. This corresponded with a heightened lipogenic metabolism, as both reservoir species and building block compounds. Interestingly, lipid metabolism affects mitochondria functioning yet the mechanisms of lipid-mediated functions are unclear. Data showing oxidised fatty acids and glutathione system are elevated in CAFs, compared to normal fibroblasts, strengthens the hypothesis that increased metabolic activity is related to mitochondrial activity. This manuscript describes mechanisms responsible for the altered metabolic flux and shows that prostate cancer-derived extracellular vesicles can increase basal respiration in normal fibroblasts, mirroring that of the disease-like phenotype. This indicates that extracellular vesicles derived from prostate cancer cells may drive an altered oxygen-dependent metabolism associated to mitochondria in CAFs.