Ikram Ullah

Dr. Ikram Ullah

Horticulture, Northwest A&F University, Yangling, China
orcid
Researcher focused on gene editing technologies and regulato...

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 June 2020 in Plants
Verified
Journal Article
Open access
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ZBZeeshan Ali Buttar
Zeeshan Ali Buttar
SWSheng Nan Wu
Sheng Nan Wu
Marino B. ArnaoMarino B. Arnao
Marino B. Arnao
CWChaojie Wang
Chaojie Wang
IUIkram Ullah
Ikram Ullah
CWChengshe Wang
Chengshe Wang
Melatonin (N-acetyl-5-methoxytryptamine) is a pleiotropic signaling molecule that plays a crucial role in the regulation of various environmental stresses, including heat stress (HS). In this study, a 100 μM melatonin (MT) pretreatment followed by exposure to heat stress for different time periods was found to efficiently reduce oxidative stress by preventing the over-accumulation of hydrogen peroxide (H2O2), lowering the lipid peroxidation content (malondialdehyde (MDA) content), and increasing proline (Pro) biosynthesis. Moreover, the activities of antioxidant enzymes, such as superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD), were increased substantially in MT-pretreated wheat seedlings. The presence of MT significantly improved the heat tolerance of wheat seedlings by modulating their antioxidant defense system, activating the ascorbate–glutathione (AsA–GSH) cycle comprising ascorbate peroxidase (APX), and increasing glutathione reductase (GR) activities. It also held the photosynthetic machinery stable by increasing the chlorophyll content. Enhancement in the endogenous MT contents was also observed in the MT+HS-treated plants. Furthermore, the expression of reactive oxygen species (ROS)-related genes TaSOD, TaPOD, and TaCAT, and anti-stress responsive genes, such as TaMYB80, TaWRKY26, and TaWRKY39, was also induced in MT-treated seedlings. Due to these notable changes, an improvement in stress resistance was observed in MT-treated seedlings compared with control. Taken together, our findings suggest that MT can play a key role in boosting the stress tolerance of plants by modulating the antioxidant defense system and regulating the transcription of stress-responsive genes.

1 December 2025 in Agriculture
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Journal Article
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AHAMEER HAMZA
AMEER HAMZA
DKDanutė Karčauskienė
Danutė Karčauskienė
IMIeva Mockeviciene
Ieva Mockeviciene
RRRegina Repšienė
Regina Repšienė
MTMukkram Ali Tahir
Mukkram Ali Tahir
IUIkram Ullah
Ikram Ullah
Soil aggregate stability is a key indicator of soil health and is fundamental to soil processes such as water infiltration, nutrient cycling, carbon sequestration, erosion control, and ecosystem functionality. However, research concerning the impact of natural and anthropogenic factors on SAS across different climates, soil types, and management practices is lacking. This review synthesizes current understanding of physical, chemical, and biological mechanisms that govern the aggregate formation and stability and brings to light how the natural and anthropogenic drivers influence these processes. It highlights how clay mineralogy, root systems, microbial diversity, soil organic matter, and management practices shape the structure and turnover of aggregates essential for agricultural productivity. Key drivers of aggregate formation, categorized into natural (such as texture, clay mineral interaction, biota, and climate) and anthropogenic (such as tillage, land use changes, organic amendments) factors, have been critically evaluated. This review provides an insightful framework for soil management that may help enhance soil aggregation and promote sustainable agriculture and food security, especially under climate change.

5 June 2019 in FEBS Open Bio
Verified
Journal Article
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YPYanan Pu
Yanan Pu
LHLingyun Hou
Lingyun Hou
YGYingqi Guo
Yingqi Guo
IUIkram Ullah
Ikram Ullah
YYYongping Yang
Yongping Yang
YYYanling Yue
Yanling Yue
Callose is a β‐1,3‐glucan commonly found in higher plants that plays an important role in regulating plant pollen development. It is synthesized by glucan synthase‐like (GSL) and is degraded by the enzyme endo‐1,3‐β‐glucosidase. However, genome‐wide analyses of callose GSL and endo‐1,3‐β‐glucosidase enzymes in fertile and sterile flower buds of Chinese cabbage have not yet been reported. Here, we show that delayed callose degradation at the tetrad stage may be the main cause of microspore abortion in Chinese cabbage with nuclear sterility near‐isogenic line ‘10L03’. Fifteen callose GSLs and 77 endo‐1,3‐β‐glucosidase enzymes were identified in Chinese cabbage. Phylogenetic, gene structural and chromosomal analyses revealed that the expansion occurred due to three polyploidization events of these two gene families. Expression pattern analysis showed that the GSL and endo‐1,3‐β‐glucosidase enzymes are involved in the development of various tissues and that the genes functionally diverged during long‐term evolution. Relative gene expression analysis of Chinese cabbage flowers at different developmental stages showed that high expression of the synthetic enzyme BraA01g041620 and low expression of AtA6‐homologous genes (BraA04g008040, BraA07g009320, BraA01g030220 and BraA03g040850) and two other genes (BraA10g020080 and BraA05g038340) for degrading enzymes in the meiosis and tetrad stages may cause nuclear sterility in the near‐isogenic line ‘10L03’. Overall, our data provide an important foundation for comprehending the potential roles of the callose GSL and endo‐1,3‐β‐glucosidase enzymes in regulating pollen development in Chinese cabbage.

25 October 2022 in Horticulturae
Verified
Journal Article
Open access
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IUIkram Ullah
Ikram Ullah
WYWenbin Yuan
Wenbin Yuan
Muhammad UzairMuhammad Uzair
Muhammad Uzair
SLSisi Li
Sisi Li
ORObaid Ur Rehman
Obaid Ur Rehman
HWHong-zhi Wu
Hong-zhi Wu
Rose (Rosa chinensis Jacq.) is an important economic ornamental crop and its yield is affected by different biotic and abiotic stresses. Among the biotic stresses, the gray mold disease caused by Botrytis cinerea is a serious threat to rose production. The basic helix-loop-helix (bHLH) is a large transcription factor family involved in several vital plant physiological processes, including growth, development, and stress response. However, no substantial reports exist on bHLH genes in rose. Here, the genome-wide identification, characterization, and expression analysis of the rose bHLH (RcbHLH) genes was carried out. In total, 100 RcbHLHs were identified in the rose genome and mapped onto different rose chromosomes. The gene duplication analysis revealed both tandem and segmental duplications in RcbHLHs. The RcbHLHs among other plant bHLHs were divided into 21 sub-groups on the phylogenetic tree. Additionally, prediction of the different cis-regulatory elements and the gene ontology of the identified RcbHLHs indicated their possible functions in rose plants. The expression analysis of selected RcbHLHs genes in two contrasting rose varieties (A29 = Black Baccara and XS = Sweet Avalanche) under B. cinerea infection provided insights into the involvement of RcbHLHs in rose–B. cinerea interactions. Moreover, this study provided details on the bHLH family genes in rose and their potential roles in rose defense against B. cinerea infection.

10 October 2025 in Scientia Horticulturae
Verified
Journal Article
Open access
IUIkram Ullah
Ikram Ullah
IUIhteram Ullah
Ihteram Ullah
HZHuafeng Zhang
Huafeng Zhang
MKManzoor R. Khan
Manzoor R. Khan
AMAbdul Mateen
Abdul Mateen
RCRugang Chen
Rugang Chen

26 April 2023 in BMC Genomics
Verified
Journal Article
Open access
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Satyabrata NandaSatyabrata Nanda
Satyabrata Nanda
PRPriyadarshini Rout
Priyadarshini Rout
IUIkram Ullah
Ikram Ullah
SNSwapna Rani Nag
Swapna Rani Nag
VRVelagala Veerraghava Reddy
Velagala Veerraghava Reddy
HWHong-zhi Wu
Hong-zhi Wu
Background: The plant cysteine-rich receptor-like kinases (CRKs) are a large family having multiple roles, including defense responses under both biotic and abiotic stress. However, the CRK family in cucumbers (Cucumis sativus L.) has been explored to a limited extent. In this study, a genome-wide characterization of the CRK family has been performed to investigate the structural and functional attributes of the cucumber CRKs under cold and fungal pathogen stress. Results: A total of 15 C. sativus CRKs (CsCRKs) have been characterized in the cucumber genome. Chromosome mapping of the CsCRKs revealed that 15 genes are distributed in cucumber chromosomes. Additionally, the gene duplication analysis of the CsCRKs yielded information on their divergence and expansion in cucumbers. Phylogenetic analysis divided the CsCRKs into two clades along with other plant CRKs. Functional predictions of the CsCRKs suggested their role in signaling and defense response in cucumbers. The expression analysis of the CsCRKs by using transcriptome data and via qRT-PCR indicated their involvement in both biotic and abiotic stress responses. Under the cucumber neck rot pathogen, Sclerotium rolfsii infection, multiple CsCRKs exhibited induced expressions at early, late, and both stages. Finally, the protein interaction network prediction results identified some key possible interacting partners of the CsCRKs in regulating cucumber physiological processes. Conclusions: The results of this study identified and characterized the CRK gene family in cucumbers. Functional predictions and validation via expression analysis confirmed the involvement of the CsCRKs in cucumber defense response, especially against S. rolfsii. Moreover, current findings provide better insights into the cucumber CRKs and their involvement in defense responses.