39023 Hugo Jhoncon

Dr. 39023 Hugo Jhoncon

Universidad Nacional de Educación Enrique Guzmán y Valle

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 January 2022 in Genes
Verified
Journal Article
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CSCarla Saldaña
Carla Saldaña
Pedro Manuel Rodriguez-GradosPedro Manuel Rodriguez-Grados
Pedro Manuel Rodriguez-Grados
JCJulio César Chávez-Galarza
Julio César Chávez-Galarza
SFSheferson Feijoo
Sheferson Feijoo
Juan Carlos Guerrero-AbadJuan Carlos Guerrero-Abad
Juan Carlos Guerrero-Abad
Carlos ArbizuCarlos Arbizu
Carlos Arbizu
Capirona (Calycophyllum spruceanum Benth.) belongs to subfamily Ixoroideae, one of the major lineages in the Rubiaceae family, and is an important timber tree. It originated in the Amazon Basin and has widespread distribution in Bolivia, Peru, Colombia, and Brazil. In this study, we obtained the first complete chloroplast (cp) genome of capirona from the department of Madre de Dios located in the Peruvian Amazon. High-quality genomic DNA was used to construct libraries. Pair-end clean reads were obtained by PE 150 library and the Illumina HiSeq 2500 platform. The complete cp genome of C. spruceanum has a 154,480 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (84,813 bp) and a small single-copy (SSC) region (18,101 bp), separated by two inverted repeat (IR) regions (25,783 bp). The annotation of C. spruceanum cp genome predicted 87 protein-coding genes (CDS), 8 ribosomal RNA (rRNA) genes, 37 transfer RNA (tRNA) genes, and one pseudogene. A total of 41 simple sequence repeats (SSR) of this cp genome were divided into mononucleotides (29), dinucleotides (5), trinucleotides (3), and tetranucleotides (4). Most of these repeats were distributed in the noncoding regions. Whole chloroplast genome comparison with the other six Ixoroideae species revealed that the small single copy and large single copy regions showed more divergence than inverted regions. Finally, phylogenetic analyses resolved that C. spruceanum is a sister species to Emmenopterys henryi and confirms its position within the subfamily Ixoroideae. This study reports for the first time the genome organization, gene content, and structural features of the chloroplast genome of C. spruceanum, providing valuable information for genetic and evolutionary studies in the genus Calycophyllum and beyond.

1 September 2022 in Data
Verified
Journal Article
Open access
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CSCarla Saldaña
Carla Saldaña
JCJulio César Chávez-Galarza
Julio César Chávez-Galarza
GCGermán De la Cruz
Germán De la Cruz
3J39023 Hugo Jhoncon
39023 Hugo Jhoncon
Juan Carlos Guerrero-AbadJuan Carlos Guerrero-Abad
Juan Carlos Guerrero-Abad
Carlos ArbizuCarlos Arbizu
Carlos Arbizu
Sweet cucumber (Solanum muricatum) sect. Basarthrum is a neglected horticultural crop native to the Andean region. It is naturally distributed very close to other two Solanum crops of high importance, potatoes, and tomatoes. To date, molecular tools for this crop remain undetermined. In this study, the complete sweet cucumber chloroplast (cp) genome was obtained and compared with seven Solanaceae species. The cp genome of S. muricatum was 155,681 bp in length and included a large single copy (LSC) region of 86,182 bp and a small single-copy (SSC) region of 18,360 bp, separated by a pair of inverted repeats (IR) regions of 25,568 bp. The cp genome possessed 87 protein-coding genes (CDS), 37 transfer RNA (tRNA) genes, eight ribosomal RNA (rRNA) genes, and one pseudogene. Furthermore, 48 perfect microsatellites were identified. These repeats were mainly located in the noncoding regions. Whole cp genome comparative analysis revealed that the SSC and LSC regions showed more divergence than IR regions. Similar to previous studies, our phylogenetic analysis showed that S. muricatum is a sister species to members of sections Petota + Lycopersicum + Etuberosum. We expect that this first sweet cucumber chloroplast genome will provide potential molecular markers and genomic resources to shed light on the genetic diversity and population studies of S. muricatum, which will allow us to identify varieties and ecotypes. Finally, the features and the structural differentiation will provide us with information about the genes of interest, generating tools for the most precise selection of the best individuals of sweet cucumber, in less time and with fewer resources.

17 May 2022 in Preprints.org
Verified
Preprint
Open access
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CSCarla Saldaña
Carla Saldaña
JCJulio César Chávez-Galarza
Julio César Chávez-Galarza
GCGermán De la Cruz
Germán De la Cruz
3J39023 Hugo Jhoncon
39023 Hugo Jhoncon
Juan Carlos Guerrero-AbadJuan Carlos Guerrero-Abad
Juan Carlos Guerrero-Abad
Carlos ArbizuCarlos Arbizu
Carlos Arbizu
Sweet cucumber (Solanum muricatum) sect. Basarthrum, is a neglected horticultural crop native of the Andean region. It is naturally distributed very close to potatoes (Solanum sect. Petota) and tomatoes (Solanum sect. Lycopersicon), two groups of high economic importance. To date, molecular tools for this crop are still undetermined. We here obtained the first complete chloroplast (cp) genome of sweet cucumber and compared with seven Solanaceae species. Pair-end clean reads were obtained by PE 150 library and the Illumina HiSeq 2500 platform. The complete cp genome of S. muricatum had a 155,681 bp with typical quadripartite structure, containing a large single copy (LSC) region (86,182 bp) and a small single-copy (SSC) region (18,360 bp), separated by two inverted repeat (IR) regions (25,568 bp). The annotation of chloroplast genome predicted 88 protein-coding genes (CDS), 8 ribosomal RNA (rRNA) genes, 37 transfer RNA (tRNA) genes, and one pseudogene. A total of 48 perfect microsatellites were identified, divided in mononucleotide repeats (32), followed by tetranucleotide (6) and dinucleotides (5). SSRs with trinucleotides repeats (3), pentanucleotide (1) and hexanucleotide (1) repeats motifs in these genomes were identified in lower quantity. Most of these repeats were distributed in the noncoding regions. Whole chloroplast genome comparison with the other seven Solanaceae species revealed that the small and large single copy regions showed more divergence than inverted regions. Finally, phylogenetic analysis resolved that S. muricatum is a sister species to members of sections Petota + Lycopersicum + Etuberosum. This study reports for the first time the genome organization, gene content, and structural features of the cp genome of S. muricatum. Also, this study may provide the basis for evaluating genetic diversity within Solanum, and will be useful to examine the evolutionary processes in sweet cucumber landraces.

1 January 2022 in Chilean journal of agricultural & animal sciences
Verified
Journal Article
Closed access
CSCarla Saldaña
Carla Saldaña
JCJohan D. Cancan
Johan D. Cancan
ESEvelin Judith Salazar
Evelin Judith Salazar
SVSheyla Yanett Chumbimune Vivanco
Sheyla Yanett Chumbimune Vivanco
3J39023 Hugo Jhoncon
39023 Hugo Jhoncon
Carlos ArbizuCarlos Arbizu
Carlos Arbizu
Ulcumano, which is native to South America, is an important conifer in Peru. Molecular studies are scarce, limiting modern breeding and appropriate conservation activities. Currently, molecular markers are widely employed to explore genetic structure and diversity parameters of plant species in a fast and precise manner. The objective of this study was to analyze the genetic diversity and population structure of ulcumano in Peru by using DNA-based molecular markers. Nine Randomly Amplified Polymorphic DNA (RAPD) markers were used, while 95 individuals of ulcumano were sampled from three departments of Peru. A total of 265 DNA fragments were manually scored, but 247 of them were kept after removing the non-polymorphic markers. Genetic distances were calculated using R software based on Provesti´s coefficient. A dendrogram was obtained using the UPGMA clustering algorithm, showing no clear clustering. The principal coordinate analysis agreed with two population structure analyses, demonstrating that ulcumano is contained within two clusters, (i) Junín + Pasco, and (ii) Cajamarca, while very few individuals are intermixed. Genetic diversity parameters were estimated considering the two groups (populations) identified by STRUCTURE software. Nei's genetic diversity estimate varied between 0.22 and 0.28, while Shannon index ranged from 3.43 to 4.16. Population divergence (Fst) between the two clusters revealed low genetic differentiation (0.064). AMOVA analysis revealed that 87.31 and 12.69% of the total genetic variation were found within populations and between individuals, respectively. To the best of our knowledge, this is the first molecular study in ulcumano in Peru, and provides valuable information for the genetic improvement and sustainable management of this conifer in the country.

3 July 2023 in Qantu Yachay
Verified
Journal Article
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SHSinforosa Lourdes Poma Henostroza
Sinforosa Lourdes Poma Henostroza
PBPaula Alejandrina Sánchez Baquerizo
Paula Alejandrina Sánchez Baquerizo
RCRobert Sandro Suárez Calixto
Robert Sandro Suárez Calixto
3J39023 Hugo Jhoncon
39023 Hugo Jhoncon
RCRosario María Isidro Cámac
Rosario María Isidro Cámac
LELeyla Shiwan Condore Espinoza
Leyla Shiwan Condore Espinoza
La anemia ferropénica es un flagelo que asola al mundo y en especial a los niños de edad preescolar. El Perú no es ajeno a dicho problema, por ello el presente estudio se orienta a indagar sobre la educación alimentaria, el consumo de galletas hidrolizadas de atún y anemia en niños menores de 5 años, en el asentamiento humano San Genaro - Chorrillos. La metodología que utilizó la investigación se deposita en el enfoque cuantitativo y desde el diseño descriptivo. Optar por lo mencionado anteriormente, facilitó la comprensión del fenómeno de estudio a partir de sus características. Los instrumentos que se utilizaron fue el hemograma para el diagnóstico de la anemia, las galletas enriquecidas con hidrolizado de atún se analizaron sus características químicas, físicas, microbiológicas y la evaluación sensorial. Respecto a la medición de la variable educación alimentaria se utilizó el instrumento de Esteban-Figuerola et al. (2020). Para el análisis y reporte de los resultados se empleó el Excel. El estudio concluyó con la evaluación sensorial de las galletas infiriendo que la adición del hidrolizado de pescado mejora el producto, con la finalidad de combatir la anemia.

29 August 2024 in Revista de Investigaciones Altoandinas - Journal of High Andean Research
Verified
Journal Article
Open access
DZDiana Sifuentes Zorrila
Diana Sifuentes Zorrila
EAEdison Palomares Anselmo
Edison Palomares Anselmo
LLLuis Primitivo Vargas Luna
Luis Primitivo Vargas Luna
Sergio Eduardo Contreras-LizaSergio Eduardo Contreras-Liza
Sergio Eduardo Contreras-Liza
ETEdwin Macavilca Ticlayauri
Edwin Macavilca Ticlayauri
3J39023 Hugo Jhoncon
39023 Hugo Jhoncon
The quality of potatoes for processing depends on varietal, environmental and crop management factors, and the consumption of potato products has increased.The objective of the research was to determine the effect of calcareous amendments on the production and frying quality of potatoes potato cv. Bicentenaria under high Andean conditions. The research was carried out in the rural community of Canín at Checras district (Lima) altitude of 3880 masl. The climate of the locality is humid and cold, with an annual rainfall of 800 mm and acid soils (pH 5.0) of sandy-clay texture. Five liming treatments and a control without liming were applied to the soil (agricultural lime 500 kg ha-1 and carbonatite 500, 1000, 1500 and 2000 kg ha-1). Agronomic and biochemical characteristics of the tuber were evaluated and sensory analysis was performed for potato frying. Data were analyzed statistically and the Scott-Knott test was used to compare treatment means. Liming with carbonatite 1500 kg ha-1 statistically outperformed the other treatments in tuber weight and was similar to the control; treatment with carbonatite 1000 kg ha-1 had a greater effect on mean tuber weight. The treatments with agricultural lime or carbonatite significantly reduced (p <0.05) the glucose content in the tuber with respect to the control. Sensory tests were significant for liming treatments for chip color. Soil liming influenced some agronomic characteristics and biochemical parameters of the tuber, as well as the sensory evaluation of potato chips.