At present, learning-based citrus blossom recognition models based on deep learning are highly complicated and have a large number of parameters. In order to estimate citrus flower quantities in natural orchards, this study proposes a lightweight citrus flower recognition model based on improved YOLOv4. In order to compress the backbone network, we utilize MobileNetv3 as a feature extractor, combined with deep separable convolution for further acceleration. The Cutout data enhancement method is also introduced to simulate citrus in nature for data enhancement. The test results show that the improved model has an mAP of 84.84%, 22% smaller than that of YOLOv4, and approximately two times faster. Compared with the Faster R-CNN, the improved citrus flower rate statistical model proposed in this study has the advantages of less memory usage and fast detection speed under the premise of ensuring a certain accuracy. Therefore, our solution can be used as a reference for the edge detection of citrus flowering.