Although P. pastoris is widely used for the secretory production of pharmaceutical proteins, its successful applications in the secretory production of industrial enzymes are limited. The α-mating factor pre-pro leader is the most widely used secretion signal in P. pastoris , but numerous industrial enzymes cannot be secreted using it.

Chayote (Sechium edule) produces edible tubers with high starch content after 1 year of growth but the mechanism of chayote tuberization remains unknown. ‘Tuershao’, a chayote cultivar lacking edible fruits but showing higher tuber yield than traditional chayote cultivars, was used to study tuber formation through integrative analysis of the metabolome and transcriptome profiles at three tuber-growth stages. Starch biosynthesis- and galactose metabolism-related genes and metabolites were significantly upregulated during tuber bulking, whereas genes encoding sugars will eventually be exported transporter (SWEET) and sugar transporter (SUT) were highly expressed during tuber formation. Auxin precursor (indole-3-acetamide) and ethylene precursor, 1-aminocyclopropane-1-carboxylic acid, were upregulated, suggesting that both hormones play pivotal roles in tuber development and maturation. Our data revealed a similar tuber-formation signaling pathway in chayote as in potatoes, including complexes BEL1/KNOX and SP6A/14-3-3/FDL. Down-regulation of the BEL1/KNOX complex and upregulation of 14-3-3 protein implied that these two complexes might have distinct functions in tuber formation. Finally, gene expression and microscopic analysis indicated active cell division during the initial stages of tuber formation. Altogether, the integration of transcriptome and metabolome analyses unraveled an overall molecular network of chayote tuberization that might facilitate its utilization.

In recent times, the excessive accumulation of nitrate has been one of the main reasons for the secondary salinization of greenhouse soils. Light plays a key role in a plant’s growth, development, and response to stress. A low-red to far-red (R:FR) light ratio could enhance plant salinity tolerance, but the mechanism at a molecular level is unclear. Thus, we analyzed the transcriptome responses of tomato seedlings to calcium nitrate stress under either a low R:FR ratio (0.7) or normal light conditions. Under calcium nitrate stress, a low R:FR ratio enhanced both the antioxidant defense system and the rapid physiological accumulation of proline in tomato leaves, which promoted plant adaptability. Using weighted gene co-expression network analysis (WGCNA), three modules including 368 differentially expressed genes (DEGs) were determined to be significantly associated with these plant traits. Functional annotations showed that the responses of these DEGs to a low R:FR ratio under excessive nitrate stress were enriched in the areas of hormone signal transduction, amino acid biosynthesis, sulfide metabolism, and oxidoreductase activity. Furthermore, we identified important novel hub genes encoding certain proteins, including FBNs, SULTRs, and GATA-like transcription factor, which may play a vital role in low R:FR light-induced salt responses. These findings offer a new perspective on the mechanisms and environmental implications behind low R:FR ratio light-modulated tomato saline tolerance.

The MADS-box gene plays an important role in plant growth and development. As an important vegetable of Cucurbitaceae, chayote has great edible and medicinal value. So far, there is little molecular research on chayote, and there are no reports on the MADS-box transcription factor of chayote. In this study, the MADS-box gene family of chayote was analyzed for the first time, and a total of 70 MADS-box genes were identified, including 14 type I and 56 type II MICK MADS genes. They were randomly distributed on 13 chromosomes except for chromosome 11. The light response element, hormone response element and abiotic stress response element were found in the promoter region of 70 MADS genes, indicating that the MADS gene can regulate the growth and development of chayote, resist abiotic stress, and participate in hormone response; GO and KEGG enrichment analysis also found that SeMADS genes were mainly enriched in biological regulation and signal regulation, which further proved the important role of MADS-box gene in plant growth and development. The results of collinearity showed that segmental duplication was the main driving force of MADS gene expansion in chayote. RNA-seq showed that the expression levels of SeMADS06, SeMADS13, SeMADS26, SeMADS28, SeMADS36 and SeMADS37 gradually increased with the growth of chayote, indicating that these genes may be related to the development of root tubers of ‘Tuershao’. The gene expression patterns showed that 12 SeMADS genes were specifically expressed in the male flower in ‘Tuershao’ and chayote. In addition, SeMADS03 and SeMADS52 may be involved in regulating the maturation of male flowers of ‘Tuershao’ and chayote. SeMADS21 may be the crucial gene in the development stage of the female flower of ‘Tuershao’. This study laid a theoretical foundation for the further study of the function of the MADS gene in chayote in the future.

Elevated [CO₂] enhances light interception and carboxylation efficiency in plants. The combined effects of [CO₂] and photosynthetic photon flux density (PPFD) on stomatal morphology, leaf anatomy, and photosynthetic capacity in tomato seedlings remain unclear. This study subjected tomato seedlings (Solanum lycopersicum Mill. cv. Jingpeng No.1) to two [CO₂] (ambient [a[CO₂], 400 µmol·mol⁻¹] and enriched [e[CO₂], 800 µmol·mol⁻¹]) and three PPFD levels (L; low[Ll: 200 µmol·m⁻²·s⁻¹], moderate[Lm: 300 µmol·m⁻²·s⁻¹], and high[Lh: 400 µmol·m⁻²·s⁻¹]) to assess their interactive impacts. Results showed that e[CO₂] and increased PPFD synergistically improved relative growth rate and net assimilation rate while reducing specific leaf area and leaf area ratio. Notably, e[CO₂] decreased stomatal aperture (−13.81%) and density (−27.76%), whereas elevated PPFD promoted stomatal morphological adjustments. Additionally, Leaf thickness increased by 72.98% under e[CO₂], with Lm and Lh enhancing this by 10.79% and 41.50% compared to Ll. Furthermore, photosynthetic performance under e[CO₂] was further evidenced by improved chlorophyll fluorescence parameters (excluding non-photochemical quenching). While both e[CO₂] and increased PPFD Photosynthetic performance under e[CO₂] was further evidenced by improved chlorophyll fluorescence parameters (excluding non-photochemical quenching). Moreover, e[CO₂]-Lh treatment maximized total dry mass and seedling health index. Correlation analysis indicated that synergistic optimization of stomatal traits and leaf structure under a combination of e[CO₂] and increased PPFD enhanced light harvesting and CO₂ diffusion, thereby promoting carbon assimilation. These findings highlight e[CO₂]-Lh as an optimal strategy for tomato seedling growth, providing empirical guidance for precision CO₂ fertilization and light management in controlled cultivation.

Impatiens walleriana is of great ornamental value, but it may suffer growth inhibition when it is exposed to sub-low temperatures for a long time. Although there are many studies on the positive effect of arbuscular mycorrhizal fungi (AMF) on cold tolerance, whether AMF could alleviate the sub-low temperature injury of Impatiens walleriana is unknown. In this experiment, two kinds of Impatiens walleriana were inoculated with AMF and treated with sub-low temperature to evaluate the physiological and biochemical characteristics of Impatiens walleriana seedlings. The results showed that the plant height of ‘Super Elf (Rose red)’ under stress and inoculated with 50 g and 100 g AMF compared to sub-low temperature treatment increased by 4.94% and 19.01%, and the plant height of ‘Super Elf (red)’ under stress and inoculated with 50 g and 100 g AMF increased by 3.11% and 17.03%, respectively. Compared to sub-low temperature treatment, the stem diameter of ‘Super Elf (Rose red)’ under stress and inoculated with 50 g and 100g AMF increased by 47.17% and 50.94%, respectively. The same mitigation effect was observed in ‘Super Elf (red)’. Compared with sub-low temperature treatment, Fv’/Fm’, Y(II) and qP of ‘Super Elf (Rose red)’ inoculated with 50 g AMF significantly increased by 75.76%, 52.17%, and 43.48%, while NPQ significantly decreased by 2.96 times, whereas the corresponding values for ‘Super Elf (Rose red)’ inoculated with 100 g AMF increased by 87.88%, 82.61%, and 65.22%, while NPQ significantly increased by 1.47 times. Compared with sub-low temperature treatment, Fv’/Fm’, Y(II) and qP of ‘Super Elf (red)’ inoculated with 50 g AMF significantly increased by 53.49%, 28.95%, and 29.31%, while NPQ significantly decreased by 0.84 times, whereas the corresponding values for ‘Super Elf (red)’ inoculated with 100 g AMF increased by 53.49%, 23.68%, and 22.41%, while NPQ significantly increased by 3.48 times. Meanwhile, ‘Super Elf (Rose red)’ and ‘Super Elf (red)’ vaccination with AMF reduced the levels of O₂⁻ and H₂O₂ accumulation in leaves at sub-low temperatures and mitigated the extent of damage to cell membrane lipid peroxidation. Therefore, AMF inoculation can improve the tolerance of plants to sub-low temperatures.