Andres Marino Alvarez

Dr. Andres Marino Alvarez

Universidad Nacional de Colombia
orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 April 2023 in Sensors
Verified
Journal Article
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YCYeison Nolberto Cardona-Alvarez
Yeison Nolberto Cardona-Alvarez
AAAndres Marino Alvarez
Andres Marino Alvarez
DCDavid Cárdenas-Peña
David Cárdenas-Peña
GCGermán Albeiro Castaño-Duque
Germán Albeiro Castaño-Duque
GCGerman Castellanos-Dominguez
German Castellanos-Dominguez
An Open Brain–Computer Interface (OpenBCI) provides unparalleled freedom and flexibility through open-source hardware and firmware at a low-cost implementation. It exploits robust hardware platforms and powerful software development kits to create customized drivers with advanced capabilities. Still, several restrictions may significantly reduce the performance of OpenBCI. These limitations include the need for more effective communication between computers and peripheral devices and more flexibility for fast settings under specific protocols for neurophysiological data. This paper describes a flexible and scalable OpenBCI framework for electroencephalographic (EEG) data experiments using the Cyton acquisition board with updated drivers to maximize the hardware benefits of ADS1299 platforms. The framework handles distributed computing tasks and supports multiple sampling rates, communication protocols, free electrode placement, and single marker synchronization. As a result, the OpenBCI system delivers real-time feedback and controlled execution of EEG-based clinical protocols for implementing the steps of neural recording, decoding, stimulation, and real-time analysis. In addition, the system incorporates automatic background configuration and user-friendly widgets for stimuli delivery. Motor imagery tests the closed-loop BCI designed to enable real-time streaming within the required latency and jitter ranges. Therefore, the presented framework offers a promising solution for tailored neurophysiological data processing.

3 September 2020 in Brain Informatics
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DCDiego Collazos-Huertas
Diego Collazos-Huertas
AAAndres Marino Alvarez
Andres Marino Alvarez
CACarlos Daniel Acosta-Medina
Carlos Daniel Acosta-Medina
GCG. A. Castaño-Duque
G. A. Castaño-Duque
GCGerman Castellanos-Dominguez
German Castellanos-Dominguez
Interpretation of brain activity responses using motor imagery (MI) paradigms is vital for medical diagnosis and monitoring. Assessed by machine learning techniques, identification of imagined actions is hindered by substantial intra- and inter-subject variability. Here, we develop an architecture of Convolutional Neural Networks (CNN) with an enhanced interpretation of the spatial brain neural patterns that mainly contribute to the classification of MI tasks. Two methods of 2D-feature extraction from EEG data are contrasted: Power Spectral Density and Continuous Wavelet Transform. For preserving the spatial interpretation of extracting EEG patterns, we project the multi-channel data using a topographic interpolation. Besides, we include a spatial dropping algorithm to remove the learned weights that reflect the localities not engaged with the elicited brain response. We evaluate two labeled scenarios of MI tasks: bi-class and three-class. Obtained results in an MI database show that the thresholding strategy combined with Continuous Wavelet Transform improves the accuracy and enhances the interpretability of CNN architecture, showing that the highest contribution clusters over the sensorimotor cortex with a differentiated behavior of rhythms $$\mu $$ μ and $$\beta $$ β .

16 March 2023 in Diagnostics
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DMDaniel Guillermo García Murillo
Daniel Guillermo García Murillo
AAAndres Marino Alvarez
Andres Marino Alvarez
GCGerman Castellanos-Dominguez
German Castellanos-Dominguez
This paper uses EEG data to introduce an approach for classifying right and left-hand classes in Motor Imagery (MI) tasks. The Kernel Cross-Spectral Functional Connectivity Network (KCS-FCnet) method addresses these limitations by providing richer spatial-temporal-spectral feature maps, a simpler architecture, and a more interpretable approach for EEG-driven MI discrimination. In particular, KCS-FCnet uses a single 1D-convolutional-based neural network to extract temporal-frequency features from raw EEG data and a cross-spectral Gaussian kernel connectivity layer to model channel functional relationships. As a result, the functional connectivity feature map reduces the number of parameters, improving interpretability by extracting meaningful patterns related to MI tasks. These patterns can be adapted to the subject’s unique characteristics. The validation results prove that introducing KCS-FCnet shallow architecture is a promising approach for EEG-based MI classification with the potential for real-world use in brain–computer interface systems.

20 November 2021 in Sensors
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Journal Article
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CJCristian Alfonso Jimenez-Castaño
Cristian Alfonso Jimenez-Castaño
AAAndres Marino Alvarez
Andres Marino Alvarez
OAOscar David Aguirre-Ospina
Oscar David Aguirre-Ospina
DCDavid Cárdenas-Peña
David Cárdenas-Peña
AGAlvaro Angel Orozco Gutierrez
Alvaro Angel Orozco Gutierrez
Peripheral nerve blocking (PNB) is a standard procedure to support regional anesthesia. Still, correct localization of the nerve’s structure is needed to avoid adverse effects; thereby, ultrasound images are used as an aid approach. In addition, image-based automatic nerve segmentation from deep learning methods has been proposed to mitigate attenuation and speckle noise ultrasonography issues. Notwithstanding, complex architectures highlight the region of interest lacking suitable data interpretability concerning the learned features from raw instances. Here, a kernel-based deep learning enhancement is introduced for nerve structure segmentation. In a nutshell, a random Fourier features-based approach was utilized to complement three well-known semantic segmentation architectures, e.g., fully convolutional network, U-net, and ResUnet. Moreover, two ultrasound image datasets for PNB were tested. Obtained results show that our kernel-based approach provides a better generalization capability from image segmentation-based assessments on different nerve structures. Further, for data interpretability, a semantic segmentation extension of the GradCam++ for class-activation mapping was used to reveal relevant learned features separating between nerve and background. Thus, our proposal favors both straightforward (shallow) and complex architectures (deeper neural networks).

13 April 2021 in Sensors
Verified
Journal Article
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DMDaniel Guillermo García Murillo
Daniel Guillermo García Murillo
AAAndres Marino Alvarez
Andres Marino Alvarez
GCGerman Castellanos-Dominguez
German Castellanos-Dominguez
Motor learning is associated with functional brain plasticity, involving specific functional connectivity changes in the neural networks. However, the degree of learning new motor skills varies among individuals, which is mainly due to the between-subject variability in brain structure and function captured by electroencephalographic (EEG) recordings. Here, we propose a kernel-based functional connectivity measure to deal with inter/intra-subject variability in motor-related tasks. To this end, from spatio-temporal-frequency patterns, we extract the functional connectivity between EEG channels through their Gaussian kernel cross-spectral distribution. Further, we optimize the spectral combination weights within a sparse-based ℓ2-norm feature selection framework matching the motor-related labels that perform the dimensionality reduction of the extracted connectivity features. From the validation results in three databases with motor imagery and motor execution tasks, we conclude that the single-trial Gaussian functional connectivity measure provides very competitive classifier performance values, being less affected by feature extraction parameters, like the sliding time window, and avoiding the use of prior linear spatial filtering. We also provide interpretability for the clustered functional connectivity patterns and hypothesize that the proposed kernel-based metric is promising for evaluating motor skills.

28 July 2020 in Applied Sciences
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JHJosé Alberto Hernández-Muriel
José Alberto Hernández-Muriel
JUJhon Bryan Bermeo Ulloa
Jhon Bryan Bermeo Ulloa
MHMauricio Holguin-Londoño
Mauricio Holguin-Londoño
AAAndres Marino Alvarez
Andres Marino Alvarez
AGAlvaro Angel Orozco Gutierrez
Alvaro Angel Orozco Gutierrez
Nowadays, bearings installed in industrial electric motors are constituted as the primary mode of a failure affecting the global energy consumption. Since industries’ energy demand has a growing tendency, interest for efficient maintenance in electric motors is decisive. Vibration signals from bearings are employed commonly as a non-invasive approach to support fault diagnosis and severity evaluation of rotating machinery. However, vibration-based diagnosis poses a challenge concerning the signal properties, e.g., highly dynamic and non-stationary. Here, we introduce a knowledge-based tool to analyze multiple health conditions in bearings. Our approach includes a stochastic feature selection method, termed Stochastic Feature Selection (SFS), highlighting and interpreting relevant multi-domain attributes (time, frequency, and time–frequency) related to the bearing faults discriminability. In particular, a relief-F-based ranking and a Hidden Markov Model are trained under a windowing scheme to achieve our SFS. Obtained results in a public database demonstrate that our proposal is competitive compared to state-of-the-art algorithms concerning both the number of features selected and the classification accuracy.