Rainer Fischer

Rainer Fischer

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Rainer Fischer

Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Aachen, Germany

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 July 2015 in Plant Biotechnology Journal
Verified
Journal Article
Open access
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JMJulian K‐C. Ma
Julian K‐C. Ma
JDJürgen Drossard
Jürgen Drossard
DLDavid Lewis
David Lewis
FAFriedrich Altmann
Friedrich Altmann
JBJulia Boyle
Julia Boyle
RFRainer Fischer
Rainer Fischer
Summary: Although plant biotechnology has been widely investigated for the production of clinical‐grade monoclonal antibodies, no antibody products derived from transgenic plants have yet been approved by pharmaceutical regulators for clinical testing. In the Pharma‐Planta project, the HIV‐neutralizing human monoclonal antibody 2G12 was expressed in transgenic tobacco (Nicotiana tabacum). The scientific, technical and regulatory demands of good manufacturing practice (GMP) were addressed by comprehensive molecular characterization of the transgene locus, confirmation of genetic and phenotypic stability over several generations of transgenic plants, and by establishing standard operating procedures for the creation of a master seed bank, plant cultivation, harvest, initial processing, downstream processing and purification. The project developed specifications for the plant‐derived antibody (P2G12) as an active pharmaceutical ingredient (API) based on (i) the guidelines for the manufacture of monoclonal antibodies in cell culture systems; (ii) the draft European Medicines Agency Points to Consider document on quality requirements for APIs produced in transgenic plants; and (iii) de novo guidelines developed with European national regulators. From the resulting process, a GMP manufacturing authorization was issued by the competent authority in Germany for transgenic plant‐derived monoclonal antibodies for use in a phase I clinical evaluation. Following preclinical evaluation and ethical approval, a clinical trial application was accepted by the UK national pharmaceutical regulator. A first‐in‐human, double‐blind, placebo‐controlled, randomized, dose‐escalation phase I safety study of a single vaginal administration of P2G12 was carried out in healthy female subjects. The successful completion of the clinical trial marks a significant milestone in the commercial development of plant‐derived pharmaceutical proteins.

18 October 2014 in Biotechnology for Biofuels
Verified
Journal Article
Open access
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CLCamilla Lambertz
Camilla Lambertz
MGMegan Garvey
Megan Garvey
JKJohannes Klinger
Johannes Klinger
DHDirk Heesel
Dirk Heesel
HKHolger Klose
Holger Klose
UCUlrich Commandeur
Ulrich Commandeur
Second generation biofuel development is increasingly reliant on the recombinant expression of cellulases. Designing or identifying successful expression systems is thus of preeminent importance to industrial progress in the field. Recombinant production of cellulases has been performed using a wide range of expression systems in bacteria, yeasts and plants. In a number of these systems, particularly when using bacteria and plants, significant challenges have been experienced in expressing full-length proteins or proteins at high yield. Further difficulties have been encountered in designing recombinant systems for surface-display of cellulases and for use in consolidated bioprocessing in bacteria and yeast. For establishing cellulase expression in plants, various strategies are utilized to overcome problems, such as the auto-hydrolysis of developing plant cell walls. In this review, we investigate the major challenges, as well as the major advances made to date in the recombinant expression of cellulases across the commonly used bacterial, plant and yeast systems. We review some of the critical aspects to be considered for industrial-scale cellulase production.

4 October 2012 in Frontiers in Zoology
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Journal Article
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Krishnendu MukherjeeKrishnendu Mukherjee
Krishnendu Mukherjee
RFRainer Fischer
Rainer Fischer
AVAndreas Vilcinskas
Andreas Vilcinskas
Background: Gene expression in eukaryotes is regulated by histone acetylation/deacetylation, an epigenetic process mediated by histone acetyltransferases (HATs) and histone deacetylases (HDACs) whose opposing activities are tightly regulated. The acetylation of histones by HATs increases DNA accessibility and promotes gene expression, whereas the removal of acetyl groups by HDACs has the opposite effect. Results: We explored the role of HDACs and HATs in epigenetic reprogramming during metamorphosis, wounding and infection in the lepidopteran model host Galleria mellonella. We measured the expression of genes encoding components of HATs and HDACs to monitor the transcriptional activity of each enzyme complex and found that both enzymes were upregulated during pupation. Specific HAT inhibitors were able to postpone pupation and to reduce insect survival following wounding, whereas HDAC inhibitors accelerated pupation and increased survival. The administration of HDAC inhibitors modulated the expression of effector genes with key roles in tissue remodeling (matrix metalloproteinase), the regulation of sepsis (inhibitor of metalloproteinases from insects) and host defense (antimicrobial peptides), and simultaneously induced HAT activity, suggesting that histone acetylation is regulated by a feedback mechanism. We also discovered that both the entomopathogenic fungus Metarhizium anisopliae and the human bacterial pathogen Listeria monocytogenes can delay metamorphosis in G. mellonella by skewing the HDAC/HAT balance. Conclusions: Our study provides for the first evidence that pathogenic bacteria can interfere with the regulation of HDACs and HATs in insects which appear to manipulate host immunity and development. We conclude that histone acetylation/deacetylation in insects mediates transcriptional reprogramming during metamorphosis and in response to wounding and infection.

1 March 2014 in Chemistry & Biology
Verified
Journal Article
Closed access
RORaluca Ostafe
Raluca Ostafe
RPRadivoje Prodanović
Radivoje Prodanović
JNJovana Nazor
Jovana Nazor
RFRainer Fischer
Rainer Fischer

1 July 2014 in Biomicrofluidics
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Journal Article
Open access
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RORaluca Ostafe
Raluca Ostafe
RPRadivoje Prodanović
Radivoje Prodanović
WUW. Lloyd Ung
W. Lloyd Ung
DWDavid A. Weitz
David A. Weitz
RFRainer Fischer
Rainer Fischer
A new ultra-high-throughput screening assay for the detection of cellulase activity was developed based on microfluidic sorting. Cellulase activity is detected using a series of coupled enzymes leading to the formation of a fluorescent product that can be detected on a chip. Using this method, we have achieved up to 300-fold enrichments of the active population of cells and greater than 90% purity after just one sorting round. In addition, we proved that we can sort the cellulase-expressing cells from mixtures containing less than 1% active cells.

1 April 2015 in Current Opinion in Biotechnology
Verified
Journal Article
Closed access
RFRainer Fischer
Rainer Fischer
NVNikolay Vasilev
Nikolay Vasilev
RTRichard Twyman
Richard Twyman
SSStefan Schillberg
Stefan Schillberg