15 pages, 7 figures, 6 tablesThe Census of Marine Life (2000–2010) was the largest global research programme on marine biodiversity. This paper integrated the findings of reviews of major world regions by the Census and provides a global perspective on what is known and what are the major scientific gaps. Study metrics were regional species richness, numbers of endemic and alien species, numbers of species identification guides and taxonomic experts, and a state-of-knowledge index. The threats to biodiversity were classified across the regions. A poor to moderate correlation between species richness and seabed area, and sea volume, and no correlations with topographic variation, were attributed to sparse, uneven and unrepresentative sampling in much of the global marine environment. Many habitats have been poorly sampled, particularly in deeper seas, and several species-rich taxonomic groups, especially of smaller organisms, remain poorly studied. Crustacea, Mollusca, and Pisces comprised approximately half of all known species across the regions. The proportion that these and other taxa comprised of all taxa varied sufficiently to question whether the relative number of species within phyla and classes are constant throughout the world. Overfishing and pollution were identified as the main threats to biodiversity across all regions, followed by alien species, altered temperature, acidification, and hypoxia, although their relative importance varied among regions. The findings were replicated worldwide, in both developed and developing countries: i.e. major gaps exist in sampling effort and taxonomic expertise that impair society's ability to discover new species and identify and understand species of economic and ecological importance. There was a positive relationship between the availability of species identification guides and knowledge of biodiversity, including the number of species and alien species. Available taxonomic guides and experts correlated negatively with endemic species, suggesting that the more we study the ocean the fewer endemic species are evident. There is a need to accelerate the discovery of marine biodiversity, since much of it may be lost without even being known. We discuss how international collaboration between developed and developing countries is essential for improving productivity in the discovery and management of marine biodiversity, and how various sectors may contribute to thisThe contribution of HO was financed by research grant from the Estonian Ministry of Education and Research (no. SF0180005s10). MC was supported financially by the European Commission Marie Curie Post-doctoral Fellowship through the International Outgoing Fellowships (Call FP7-PEOPLE-2007-4-1-IOF) for the ECOFUN project and by Dalhousie University, Canada. RD was supported by the projects HERMIONE (EU-FPVII), VECTOR and OBAMA (MIUR, Italy). PM was supported by the Decanato de Investigación y Desarrollo, Universidad Simón BolívarPeer reviewe

Science-based, multinational management of the Baltic Sea offers lessons on amelioration of highly disturbed marine ecosystems.

We describe, explain, and "predict" dispersal and ecosystem impacts of six Ponto-Caspian endemic species that recently invaded the Great Lakes via ballast water. The zebra mussel, Dreissena polymorpha, and quagga mussel, Dreissena bugensis, continue to colonize hard and soft substrates of the Great Lakes and are changing ecosystem function through mechanisms of ecosystem engineering (increased water clarity and reef building), fouling native mussels, high particle filtration rate with selective rejection of colonial cyanobacteria in pseudofeces, alteration of nutrient ratios, and facilitation of the rapid spread of their Ponto-Caspian associates, the benthic amphipod Echinogammarus ischnus and the round goby, Neogobius melanostomus, which feeds on zebra mussels. The tubenose goby,Proterorhinus marmoratus, which does not feed on zebra mussels, has not spread rapidly. Impacts of these benthic invaders vary with site: in some shallow areas, habitat changes and the Dreissena [ ] round goby [ ] piscivore food chain have improved conditions for certain native game fishes and waterfowl; in offshore waters, Dreissena is competing for settling algae with the native amphipod Diporeia spp., which are disappearing to the detriment of the native deep-water fish community. The predatory cladoceran Cercopagis pengoi may compete with small fishes for zooplankton and increase food-chain length.

The brackish Baltic Sea hosts species of various origins and environmental tolerances. These immigrated to the sea 10,000 to 15,000 years ago or have been introduced to the area over the relatively recent history of the system. The Baltic Sea has only one known endemic species. While information on some abiotic parameters extends back as long as five centuries and first quantitative snapshot data on biota (on exploited fish populations) originate generally from the same time, international coordination of research began in the early twentieth century. Continuous, annual Baltic Sea-wide long-term datasets on several organism groups (plankton, benthos, fish) are generally available since the mid-1950s. Based on a variety of available data sources (published papers, reports, grey literature, unpublished data), the Baltic Sea, incl. Kattegat, hosts altogether at least 6,065 species, including at least 1,700 phytoplankton, 442 phytobenthos, at least 1,199 zooplankton, at least 569 meiozoobenthos, 1,476 macrozoobenthos, at least 380 vertebrate parasites, about 200 fish, 3 seal, and 83 bird species. In general, but not in all organism groups, high sub-regional total species richness is associated with elevated salinity. Although in comparison with fully marine areas the Baltic Sea supports fewer species, several facets of the system's diversity remain underexplored to this day, such as micro-organisms, foraminiferans, meiobenthos and parasites. In the future, climate change and its interactions with multiple anthropogenic forcings are likely to have major impacts on the Baltic biodiversity.

Aim: The introduction of aquatic non‐indigenous species (ANS) has become a major driver for global changes in species biogeography. We examined spatial patterns and temporal trends of ANS detections since 1965 to inform conservation policy and management.Location: Global.Methods: We assembled an extensive dataset of first records of detection of ANS (1965–2015) across 49 aquatic ecosystems, including the (a) year of first collection, (b) population status and (c) potential pathway(s) of introduction. Data were analysed at global and regional levels to assess patterns of detection rate, richness and transport pathways.Results: An annual mean of 43 (±16 SD) primary detections of ANS occurred—one new detection every 8.4 days for 50 years. The global rate of detections was relatively stable during 1965–1995, but increased rapidly after this time, peaking at roughly 66 primary detections per year during 2005–2010 and then declining marginally. Detection rates were variable within and across regions through time. Arthropods, molluscs and fishes were the most frequently reported ANS. Most ANS were likely introduced as stowaways in ships’ ballast water or biofouling, although direct evidence is typically absent.Main conclusions: This synthesis highlights the magnitude of recent ANS detections, yet almost certainly represents an underestimate as many ANS go unreported due to limited search effort and diminishing taxonomic expertise. Temporal rates of detection are also confounded by reporting lags, likely contributing to the lower detection rate observed in recent years. There is a critical need to implement standardized, repeated methods across regions and taxa to improve the quality of global‐scale comparisons and sustain core measures over longer time‐scales. It will be fundamental to fill in knowledge gaps given that invasion data representing broad regions of the world's oceans are not yet readily available and to maintain knowledge pipelines for adaptive management.