Md. Biddut Hossain

Dr. Md. Biddut Hossain

Information and Communication Engineering, Chungbuk National University, Cheongju-si, Republic of Korea
orcid
Postdoctoral Researcher Fellow, Sejong University, Seoul, S...

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
20 December 2022 in Cancers
Verified
Journal Article
Open access
PDF file
RSRupali Kiran Shinde
Rupali Kiran Shinde
MD. SHAHINUR ALAMMD. SHAHINUR ALAM
MD. SHAHINUR ALAM
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
Shariar Md ImtiazShariar Md Imtiaz
Shariar Md Imtiaz
JKJoonHyun Kim
JoonHyun Kim
Nam KimNam Kim
Nam Kim
Cancer remains a deadly disease. We developed a lightweight, accurate, general-purpose deep learning algorithm for skin cancer classification. Squeeze-MNet combines a Squeeze algorithm for digital hair removal during preprocessing and a MobileNet deep learning model with predefined weights. The Squeeze algorithm extracts important image features from the image, and the black-hat filter operation removes noise. The MobileNet model (with a dense neural network) was developed using the International Skin Imaging Collaboration (ISIC) dataset to fine-tune the model. The proposed model is lightweight; the prototype was tested on a Raspberry Pi 4 Internet of Things device with a Neo pixel 8-bit LED ring; a medical doctor validated the device. The average precision (AP) for benign and malignant diagnoses was 99.76% and 98.02%, respectively. Using our approach, the required dataset size decreased by 66%. The hair removal algorithm increased the accuracy of skin cancer detection to 99.36% with the ISIC dataset. The area under the receiver operating curve was 98.9%.

24 January 2024 in Sensors
Verified
Journal Article
Open access
PDF file
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
RSRupali Kiran Shinde
Rupali Kiran Shinde
Sukhoon OhSukhoon Oh
Sukhoon Oh
Ki-Chul KwonKi-Chul Kwon
Ki-Chul Kwon
Nam KimNam Kim
Nam Kim
Deep learning (DL) in magnetic resonance imaging (MRI) shows excellent performance in image reconstruction from undersampled k-space data. Artifact-free and high-quality MRI reconstruction is essential for ensuring accurate diagnosis, supporting clinical decision-making, enhancing patient safety, facilitating efficient workflows, and contributing to the validity of research studies and clinical trials. Recently, deep learning has demonstrated several advantages over conventional MRI reconstruction methods. Conventional methods rely on manual feature engineering to capture complex patterns and are usually computationally demanding due to their iterative nature. Conversely, DL methods use neural networks with hundreds of thousands of parameters and automatically learn relevant features and representations directly from the data. Nevertheless, there are some limitations to DL-based techniques concerning MRI reconstruction tasks, such as the need for large, labeled datasets, the possibility of overfitting, and the complexity of model training. Researchers are striving to develop DL models that are more efficient, adaptable, and capable of providing valuable information for medical practitioners. We provide a comprehensive overview of the current developments and clinical uses by focusing on state-of-the-art DL architectures and tools used in MRI reconstruction. This study has three objectives. Our main objective is to describe how various DL designs have changed over time and talk about cutting-edge tactics, including their advantages and disadvantages. Hence, data pre- and post-processing approaches are assessed using publicly available MRI datasets and source codes. Secondly, this work aims to provide an extensive overview of the ongoing research on transformers and deep convolutional neural networks for rapid MRI reconstruction. Thirdly, we discuss several network training strategies, like supervised, unsupervised, transfer learning, and federated learning for rapid and efficient MRI reconstruction. Consequently, this article provides significant resources for future improvement of MRI data pre-processing and fast image reconstruction.

22 December 2022 in Bioengineering
Verified
Journal Article
Open access
PDF file
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
Ki-Chul KwonKi-Chul Kwon
Ki-Chul Kwon
Shariar Md ImtiazShariar Md Imtiaz
Shariar Md Imtiaz
ONOh-Seung Nam
Oh-Seung Nam
SJSeok-Hee Jeon
Seok-Hee Jeon
Nam KimNam Kim
Nam Kim
When sparsely sampled data are used to accelerate magnetic resonance imaging (MRI), conventional reconstruction approaches produce significant artifacts that obscure the content of the image. To remove aliasing artifacts, we propose an advanced convolutional neural network (CNN) called fully dense attention CNN (FDA-CNN). We updated the Unet model with the fully dense connectivity and attention mechanism for MRI reconstruction. The main benefit of FDA-CNN is that an attention gate in each decoder layer increases the learning process by focusing on the relevant image features and provides a better generalization of the network by reducing irrelevant activations. Moreover, densely interconnected convolutional layers reuse the feature maps and prevent the vanishing gradient problem. Additionally, we also implement a new, proficient under-sampling pattern in the phase direction that takes low and high frequencies from the k-space both randomly and non-randomly. The performance of FDA-CNN was evaluated quantitatively and qualitatively with three different sub-sampling masks and datasets. Compared with five current deep learning-based and two compressed sensing MRI reconstruction techniques, the proposed method performed better as it reconstructed smoother and brighter images. Furthermore, FDA-CNN improved the mean PSNR by 2 dB, SSIM by 0.35, and VIFP by 0.37 compared with Unet for the acceleration factor of 5.

15 July 2022 in Sensors
Verified
Journal Article
Open access
PDF file
Shariar Md ImtiazShariar Md Imtiaz
Shariar Md Imtiaz
Ki-Chul KwonKi-Chul Kwon
Ki-Chul Kwon
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
SAShahinur Alam
Shahinur Alam
SJSeok-Hee Jeon
Seok-Hee Jeon
Nam KimNam Kim
Nam Kim
This study proposes a robust depth map framework based on a convolutional neural network (CNN) to calculate disparities using multi-direction epipolar plane images (EPIs). A combination of three-dimensional (3D) and two-dimensional (2D) CNN-based deep learning networks is used to extract the features from each input stream separately. The 3D convolutional blocks are adapted according to the disparity of different directions of epipolar images, and 2D-CNNs are employed to minimize data loss. Finally, the multi-stream networks are merged to restore the depth information. A fully convolutional approach is scalable, which can handle any size of input and is less prone to overfitting. However, there is some noise in the direction of the edge. A weighted median filtering (WMF) is used to acquire the boundary information and improve the accuracy of the results to overcome this issue. Experimental results indicate that the suggested deep learning network architecture outperforms other architectures in terms of depth estimation accuracy.

30 March 2023 in Diagnostics
Verified
Journal Article
Open access
PDF file
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
Ki-Chul KwonKi-Chul Kwon
Ki-Chul Kwon
RSRupali Kiran Shinde
Rupali Kiran Shinde
Shariar Md ImtiazShariar Md Imtiaz
Shariar Md Imtiaz
Nam KimNam Kim
Nam Kim
We propose a dual-domain deep learning technique for accelerating compressed sensing magnetic resonance image reconstruction. An advanced convolutional neural network with residual connectivity and an attention mechanism was developed for frequency and image domains. First, the sensor domain subnetwork estimates the unmeasured frequencies of k-space to reduce aliasing artifacts. Second, the image domain subnetwork performs a pixel-wise operation to remove blur and noisy artifacts. The skip connections efficiently concatenate the feature maps to alleviate the vanishing gradient problem. An attention gate in each decoder layer enhances network generalizability and speeds up image reconstruction by eliminating irrelevant activations. The proposed technique reconstructs real-valued clinical images from sparsely sampled k-spaces that are identical to the reference images. The performance of this novel approach was compared with state-of-the-art direct mapping, single-domain, and multi-domain methods. With acceleration factors (AFs) of 4 and 5, our method improved the mean peak signal-to-noise ratio (PSNR) to 8.67 and 9.23, respectively, compared with the single-domain Unet model; similarly, our approach increased the average PSNR to 3.72 and 4.61, respectively, compared with the multi-domain W-net. Remarkably, using an AF of 6, it enhanced the PSNR by 9.87 ± 1.55 and 6.60 ± 0.38 compared with Unet and W-net, respectively.

2 May 2024 in International Journal of Biomedical Imaging
Verified
Journal Article
Open access
PDF file
Md. Biddut HossainMd. Biddut Hossain
Md. Biddut Hossain
RSRupali Kiran Shinde
Rupali Kiran Shinde
Shariar Md ImtiazShariar Md Imtiaz
Shariar Md Imtiaz
FHF. M. Fahmid Hossain
F. M. Fahmid Hossain
SJSeok-Hee Jeon
Seok-Hee Jeon
Nam KimNam Kim
Nam Kim
We present a deep learning-based method that corrects motion artifacts and thus accelerates data acquisition and reconstruction of magnetic resonance images. The novel model, the Motion Artifact Correction by Swin Network (MACS-Net), uses a Swin transformer layer as the fundamental block and the Unet architecture as the neural network backbone. We employ a hierarchical transformer with shifted windows to extract multiscale contextual features during encoding. A new dual upsampling technique is employed to enhance the spatial resolutions of feature maps in the Swin transformer-based decoder layer. A raw magnetic resonance imaging dataset is used for network training and testing; the data contain various motion artifacts with ground truth images of the same subjects. The results were compared to six state-of-the-art MRI image motion correction methods using two types of motions. When motions were brief (within 5 s), the method reduced the average normalized root mean square error (NRMSE) from 45.25% to 17.51%, increased the mean structural similarity index measure (SSIM) from 79.43% to 91.72%, and increased the peak signal-to-noise ratio (PSNR) from 18.24 to 26.57 dB. Similarly, when motions were extended from 5 to 10 s, our approach decreased the average NRMSE from 60.30% to 21.04%, improved the mean SSIM from 33.86% to 90.33%, and increased the PSNR from 15.64 to 24.99 dB. The anatomical structures of the corrected images and the motion-free brain data were similar.