Joonas Ryssy

Dr. Joonas Ryssy

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 December 2020 in Angewandte Chemie International Edition
Verified
Journal Article
Open access
PDF file
Joonas RyssyJoonas Ryssy
Joonas Ryssy
ANAshwin K. Natarajan
Ashwin K. Natarajan
JWJinhua Wang
Jinhua Wang
ALArttu J. Lehtonen
Arttu J. Lehtonen
MNMinh‐Kha Nguyen
Minh‐Kha Nguyen
AKAnton Kuzyk
Anton Kuzyk
DNA nanotechnology offers a versatile toolbox for precise spatial and temporal manipulation of matter on the nanoscale. However, rendering DNA‐based systems responsive to light has remained challenging. Herein, we describe the remote manipulation of native (non‐photoresponsive) chiral plasmonic molecules (CPMs) using light. Our strategy is based on the use of a photoresponsive medium comprising a merocyanine‐based photoacid. Upon exposure to visible light, the medium decreases its pH, inducing the formation of DNA triplex links, leading to a spatial reconfiguration of the CPMs. The process can be reversed simply by turning the light off and it can be repeated for multiple cycles. The degree of the overall chirality change in an ensemble of CPMs depends on the CPM fraction undergoing reconfiguration, which, remarkably, depends on and can be tuned by the intensity of incident light. Such a dynamic, remotely controlled system could aid in further advancing DNA‐based devices and nanomaterials.

15 July 2020 in Chemistry of Materials
Verified
Journal Article
Closed access
MNMinh-Kha Nguyen
Minh-Kha Nguyen
VNVu Hoang Nguyen
Vu Hoang Nguyen
ANAshwin Karthick Natarajan
Ashwin Karthick Natarajan
YHYike Huang
Yike Huang
Joonas RyssyJoonas Ryssy
Joonas Ryssy
AKAnton Kuzyk
Anton Kuzyk

12 January 2016 in Physical Chemistry Chemical Physics
Verified
Journal Article
Open access
PDF file
Joonas RyssyJoonas Ryssy
Joonas Ryssy
EPEloni Prioste-Amaral
Eloni Prioste-Amaral
DADaniela F. N. Assuncao
Daniela F. N. Assuncao
NRNicholas Rogers
Nicholas Rogers
GKGiles T. S. Kirby
Giles T. S. Kirby
AMAndrew Michelmore
Andrew Michelmore
Retention of functional groups in plasma polymers depend on plasma chemistry and physical surface processes.

24 May 2022 in Advanced Functional Materials
Verified
Journal Article
Open access
Joonas RyssyJoonas Ryssy
Joonas Ryssy
ALArttu J Lehtonen
Arttu J Lehtonen
JLJacky FC Loo
Jacky FC Loo
MNMinh‐Kha Nguyen
Minh‐Kha Nguyen
JSJani Seitsonen
Jani Seitsonen
SMSesha Manuguri
Sesha Manuguri
Orientational control of anisotropic plasmonic nanoparticles is an attractive proposition to generate dynamic plasmonic responses. Particularly, the use of light as a stimulus to modulate the orientation is extremely useful owing to its spatiotemporal operative ability. This work showcases a light‐mediated approach to tune the orientational features of gold nanorods in DNA‐engineered hydrogel materials. The strategy relies on the use of visible‐light‐induced photothermal effects to cause deformation of the hydrogel matrix, resulting in temperature‐controlled polarization‐dependent optical responses whose anisotropy features are highly adaptive to the nature of DNA crosslinks. The visible‐light‐mediated approach showcased here can open novel avenues to create dynamic light‐responsive materials with reconfigurable plasmonic responses.

15 December 2020 in Angewandte Chemie
Verified
Journal Article
Open access
PDF file
Joonas RyssyJoonas Ryssy
Joonas Ryssy
ANAshwin K. Natarajan
Ashwin K. Natarajan
JWJinhua Wang
Jinhua Wang
ALArttu J. Lehtonen
Arttu J. Lehtonen
MNMinh‐Kha Nguyen
Minh‐Kha Nguyen
AKAnton Kuzyk
Anton Kuzyk
DNA nanotechnology offers a versatile toolbox for precise spatial and temporal manipulation of matter on the nanoscale. However, rendering DNA‐based systems responsive to light has remained challenging. Herein, we describe the remote manipulation of native (non‐photoresponsive) chiral plasmonic molecules (CPMs) using light. Our strategy is based on the use of a photoresponsive medium comprising a merocyanine‐based photoacid. Upon exposure to visible light, the medium decreases its pH, inducing the formation of DNA triplex links, leading to a spatial reconfiguration of the CPMs. The process can be reversed simply by turning the light off and it can be repeated for multiple cycles. The degree of the overall chirality change in an ensemble of CPMs depends on the CPM fraction undergoing reconfiguration, which, remarkably, depends on and can be tuned by the intensity of incident light. Such a dynamic, remotely controlled system could aid in further advancing DNA‐based devices and nanomaterials.

8 December 2022 in Analytical Chemistry
Verified
Journal Article
Open access
YHYike Huang
Yike Huang
Joonas RyssyJoonas Ryssy
Joonas Ryssy
MNMinh-Kha Nguyen
Minh-Kha Nguyen
JLJacky FC Loo
Jacky FC Loo
SHSusanna Hällsten
Susanna Hällsten
AKAnton Kuzyk
Anton Kuzyk
Reliable characterization of binding affinities is crucial for selected aptamers. However, the limited repertoire of universal approaches to obtain the dissociation constant (KD) values often hinders the further development of aptamer-based applications. Herein, we present a competitive hybridization-based strategy to characterize aptamers using DNA origami-based chiral plasmonic assemblies as optical reporters. We incorporated aptamers and partial complementary strands blocking different regions of the aptamers into the reporters and measured the kinetic behaviors of the target binding to gain insights on aptamers' functional domains. We introduced a reference analyte and developed a thermodynamic model to obtain a relative dissociation constant of an aptamer-target pair. With this approach, we characterized RNA and DNA aptamers binding to small molecules with low and high affinities.